RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 DAW1Q8N136 415 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 PQLC3Q8N755 202 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 YIPF7Q8N8F6 280 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 ZNF615Q8N8J6 731 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 ZSCAN1Q8NBB4 408 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 OR2T35Q8NGX2 323 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 NEIL3Q8TAT5 605 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 SETD7Q8WTS6 366 aaKnown RBP4.86□□□□□ -1.63
PCDH9-203ENST00000456367 TMEM125Q96AQ2 219 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 ZBED3Q96IU2 234 aaPredicted RBP4.86□□□□□ -1.63
PCDH9-203ENST00000456367 SENP8Q96LD8 212 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 LPIN3Q9BQK8 851 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 AARSD1Q9BTE6 412 aaKnown RBP4.86□□□□□ -1.63
PCDH9-203ENST00000456367 RIOK2Q9BVS4 552 aaKnown RBP4.86□□□□□ -1.63
PCDH9-203ENST00000456367 ZNF471Q9BX82 626 aaPredicted RBP4.86□□□□□ -1.63
PCDH9-203ENST00000456367 HOXD1Q9GZZ0 328 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 SGK2Q9HBY8 427 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 ACSS2Q9NR19 701 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 TMEM184CQ9NVA4 438 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 KLK14Q9P0G3 267 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 TNS2Q63HR2 1409 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 IFT172Q9UG01 1749 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 LOC285095A0A1B0GVY8 99 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 ANXA2P2A6NMY6 339 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 TSTD3H0UI37 97 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 ARNTLO00327 626 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 EIF1AYO14602 144 aaKnown RBP4.86□□□□□ -1.63
PCDH9-203ENST00000456367 ACOT8O14734 319 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 FLRT2O43155 660 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 SGCEO43556 437 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 CDK1P06493 297 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 ANXA2P07355 339 aaKnown RBP4.86□□□□□ -1.63
PCDH9-203ENST00000456367 SPARCP09486 303 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 KDELR2P33947 212 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 ASPAP45381 313 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 EIF1AXP47813 144 aaKnown RBP4.86□□□□□ -1.63
PCDH9-203ENST00000456367 HSPA7P48741 367 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 CPT1AP50416 773 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 P2RX3P56373 397 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 RAP2BP61225 183 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 SNRPD2P62316 118 aaKnown RBP4.86□□□□□ -1.63
PCDH9-203ENST00000456367 BTG1P62324 171 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 DEFA6Q01524 100 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 CREMQ03060 361 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 CHRNEQ04844 493 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 ZNF33BQ06732 778 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 GALNT2Q10471 571 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 BAMBIQ13145 260 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 CYBRD1Q53TN4 286 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 KLHL24Q6TFL4 600 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 RAB11FIP2Q7L804 512 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 CIR1Q86X95 450 aaPredicted RBP4.86□□□□□ -1.63
PCDH9-203ENST00000456367 DENND1CQ8IV53 801 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 CRYBG2Q8N1P7 616 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 WDSUB1Q8N9V3 476 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 OR4F6Q8NGB9 312 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 OR4K2Q8NGD2 314 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 SLC7A13Q8TCU3 470 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 TMEM174Q8WUU8 243 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 SLC7A6Q92536 515 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 UHRF1Q96T88 793 aaPredicted RBP4.86□□□□□ -1.63
PCDH9-203ENST00000456367 DOHHQ9BU89 302 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 TSSK6Q9BXA6 273 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 ZNF350Q9GZX5 532 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 LMAN2LQ9H0V9 348 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 SOX17Q9H6I2 414 aaPredicted RBP4.86□□□□□ -1.63
PCDH9-203ENST00000456367 C12orf10Q9HB07 376 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 IFT46Q9NQC8 304 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 HEBP1Q9NRV9 189 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 MARCH2Q9P0N8 246 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 USP21Q9UK80 565 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 FZD4Q9ULV1 537 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 POLHQ9Y253 713 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 COL1A2P08123 1366 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 MYH6P13533 1939 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 SCN2BO60939 215 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 JRKO75564 520 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 SLC22A5O76082 557 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 PRH1P02810 166 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 STSP08842 583 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 CBSLP0DN79 551 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 ACADMP11310 421 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 ZNF3P17036 446 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 CBSP35520 551 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 RPL4P36578 427 aaKnown RBP4.86□□□□□ -1.63
PCDH9-203ENST00000456367 ETV6P41212 452 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 RAB5CP51148 216 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 RRAS2P62070 204 aaPredicted RBP4.86□□□□□ -1.63
PCDH9-203ENST00000456367 BTN3A2P78410 334 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 C2orf80Q0P641 193 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 HSPA14Q0VDF9 509 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 BIKQ13323 160 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 ZNF460Q14592 562 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 GRK1Q15835 563 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 EXOC3L2Q2M3D2 409 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 EIPR1Q53HC9 387 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 SPIN4Q56A73 249 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 MSANTD2Q6P1R3 559 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 MED27Q6P2C8 311 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 MAMSTRQ6ZN01 415 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms