RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 PNPOQ9NVS9 261 aa10.78□□□□□ -0.68
TRAF4-206ENST00000454852 TMEM9Q9P0T7 183 aa10.78□□□□□ -0.68
TRAF4-206ENST00000454852 ZFP69BQ9UJL9 534 aa10.78□□□□□ -0.68
TRAF4-206ENST00000454852 ATXN7L1Q9ULK2 861 aaPredicted RBP10.78□□□□□ -0.68
TRAF4-206ENST00000454852 AP1M2Q9Y6Q5 423 aa10.78□□□□□ -0.68
TRAF4-206ENST00000454852 ADAMTS20P59510 1910 aa10.78□□□□□ -0.68
TRAF4-206ENST00000454852 UNC13CQ8NB66 2214 aa10.77□□□□□ -0.68
TRAF4-206ENST00000454852 WDR87Q6ZQQ6 2873 aa10.77□□□□□ -0.69
TRAF4-206ENST00000454852 GMNCA6NCL1 334 aa10.77□□□□□ -0.69
TRAF4-206ENST00000454852 HAT1O14929 419 aa10.77□□□□□ -0.69
TRAF4-206ENST00000454852 CASC3O15234 703 aaKnown RBP10.77□□□□□ -0.69
TRAF4-206ENST00000454852 LCMT2O60294 686 aaKnown RBP10.77□□□□□ -0.69
TRAF4-206ENST00000454852 ULK1O75385 1050 aa10.77□□□□□ -0.69
TRAF4-206ENST00000454852 TBX6O95947 436 aaPredicted RBP10.77□□□□□ -0.69
TRAF4-206ENST00000454852 CHEK2O96017 543 aa10.77□□□□□ -0.69
TRAF4-206ENST00000454852 PVRP15151 417 aa10.77□□□□□ -0.69
TRAF4-206ENST00000454852 HMOX2P30519 316 aa10.77□□□□□ -0.69
TRAF4-206ENST00000454852 BCL6P41182 706 aa10.77□□□□□ -0.69
TRAF4-206ENST00000454852 EMP3P54852 163 aa10.77□□□□□ -0.69
TRAF4-206ENST00000454852 GNGT1P63211 74 aa10.77□□□□□ -0.69
TRAF4-206ENST00000454852 INSM1Q01101 510 aaPredicted RBP10.77□□□□□ -0.69
TRAF4-206ENST00000454852 CSTF3Q12996 717 aaKnown RBP10.77□□□□□ -0.69
TRAF4-206ENST00000454852 IFT88Q13099 833 aa10.77□□□□□ -0.69
TRAF4-206ENST00000454852 PWP1Q13610 501 aa10.77□□□□□ -0.69
TRAF4-206ENST00000454852 ADPRMQ3LIE5 342 aa10.77□□□□□ -0.69
TRAF4-206ENST00000454852 XKR7Q5GH72 579 aa10.77□□□□□ -0.69
TRAF4-206ENST00000454852 RBM44Q6ZP01 1051 aaKnown RBP10.77□□□□□ -0.69
TRAF4-206ENST00000454852 FAM47EQ6ZV65 393 aa10.77□□□□□ -0.69
TRAF4-206ENST00000454852 VN1R5Q7Z5H4 357 aa10.77□□□□□ -0.69
TRAF4-206ENST00000454852 VN1R4Q7Z5H5 301 aa10.77□□□□□ -0.69
TRAF4-206ENST00000454852 WDR75Q8IWA0 830 aaKnown RBP10.77□□□□□ -0.69
TRAF4-206ENST00000454852 KIAA2013Q8IYS2 634 aa10.77□□□□□ -0.69
TRAF4-206ENST00000454852 DCBLD1Q8N8Z6 715 aa10.77□□□□□ -0.69
TRAF4-206ENST00000454852 ANKRD53Q8N9V6 530 aa10.77□□□□□ -0.69
TRAF4-206ENST00000454852 ZNF740Q8NDX6 193 aa10.77□□□□□ -0.69
TRAF4-206ENST00000454852 TRPV3Q8NET8 790 aa10.77□□□□□ -0.69
TRAF4-206ENST00000454852 NT5CQ8TCD5 201 aa10.77□□□□□ -0.69
TRAF4-206ENST00000454852 CREB3L4Q8TEY5 395 aa10.77□□□□□ -0.69
TRAF4-206ENST00000454852 ZNF473Q8WTR7 871 aaKnown RBP10.77□□□□□ -0.69
TRAF4-206ENST00000454852 TWIST2Q8WVJ9 160 aa10.77□□□□□ -0.69
TRAF4-206ENST00000454852 METTL2AQ96IZ6 378 aaKnown RBP10.77□□□□□ -0.69
TRAF4-206ENST00000454852 MAELQ96JY0 434 aaKnown RBP10.77□□□□□ -0.69
TRAF4-206ENST00000454852 TMEM74Q96NL1 305 aa10.77□□□□□ -0.69
TRAF4-206ENST00000454852 TUBB1Q9H4B7 451 aa10.77□□□□□ -0.69
TRAF4-206ENST00000454852 ELOVL6Q9H5J4 265 aa10.77□□□□□ -0.69
TRAF4-206ENST00000454852 FAM60AQ9NP50 221 aa10.77□□□□□ -0.69
TRAF4-206ENST00000454852 CCL27Q9Y4X3 112 aa10.77□□□□□ -0.69
TRAF4-206ENST00000454852 TIMM22Q9Y584 194 aa10.77□□□□□ -0.69
TRAF4-206ENST00000454852 TRPC5OSA6NMA1 111 aa10.76□□□□□ -0.69
TRAF4-206ENST00000454852 TMEM233B4DJY2 109 aa10.76□□□□□ -0.69
TRAF4-206ENST00000454852 H3BMH7 237 aa10.76□□□□□ -0.69
TRAF4-206ENST00000454852 TXNDC9O14530 226 aa10.76□□□□□ -0.69
TRAF4-206ENST00000454852 MAP3K7O43318 606 aa10.76□□□□□ -0.69
TRAF4-206ENST00000454852 OR1F1O43749 312 aa10.76□□□□□ -0.69
TRAF4-206ENST00000454852 NRP2O60462 931 aa10.76□□□□□ -0.69
TRAF4-206ENST00000454852 CRCPO75575 148 aa10.76□□□□□ -0.69
TRAF4-206ENST00000454852 SEMA3DO95025 777 aa10.76□□□□□ -0.69
TRAF4-206ENST00000454852 SERPINA6P08185 405 aa10.76□□□□□ -0.69
TRAF4-206ENST00000454852 VIMP08670 466 aaKnown RBP10.76□□□□□ -0.69
TRAF4-206ENST00000454852 ARL1P40616 181 aaPredicted RBP10.76□□□□□ -0.69
TRAF4-206ENST00000454852 PHEXP78562 749 aa10.76□□□□□ -0.69
TRAF4-206ENST00000454852 MEF2AQ02078 507 aaPredicted RBP10.76□□□□□ -0.69
TRAF4-206ENST00000454852 CUL3Q13618 768 aa10.76□□□□□ -0.69
TRAF4-206ENST00000454852 ABRAXAS2Q15018 415 aa10.76□□□□□ -0.69
TRAF4-206ENST00000454852 TMTC4Q5T4D3 741 aa10.76□□□□□ -0.69
TRAF4-206ENST00000454852 CLEC6AQ6EIG7 209 aa10.76□□□□□ -0.69
TRAF4-206ENST00000454852 CGB2Q6NT52 195 aa10.76□□□□□ -0.69
TRAF4-206ENST00000454852 ADCK2Q7Z695 626 aa10.76□□□□□ -0.69
TRAF4-206ENST00000454852 SLCO6A1Q86UG4 719 aa10.76□□□□□ -0.69
TRAF4-206ENST00000454852 BPHLQ86WA6 291 aaPredicted RBP10.76□□□□□ -0.69
TRAF4-206ENST00000454852 MYLK4Q86YV6 388 aaPredicted RBP10.76□□□□□ -0.69
TRAF4-206ENST00000454852 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.76□□□□□ -0.697e-7■■■■□ 26.3
TRAF4-206ENST00000454852 HUS1BQ8NHY5 278 aa10.76□□□□□ -0.69
TRAF4-206ENST00000454852 SELENOMQ8WWX9 145 aa10.76□□□□□ -0.69
TRAF4-206ENST00000454852 CCDC74BQ96LY2 380 aa10.76□□□□□ -0.69
TRAF4-206ENST00000454852 RTKNQ9BST9 563 aa10.76□□□□□ -0.69
TRAF4-206ENST00000454852 MS4A8Q9BY19 250 aa10.76□□□□□ -0.69
TRAF4-206ENST00000454852 SHCBP1LQ9BZQ2 653 aa10.76□□□□□ -0.69
TRAF4-206ENST00000454852 EPN3Q9H201 632 aa10.76□□□□□ -0.69
TRAF4-206ENST00000454852 SYNPO2LQ9H987 977 aa10.76□□□□□ -0.69
TRAF4-206ENST00000454852 MEAF6Q9HAF1 191 aa10.76□□□□□ -0.69
TRAF4-206ENST00000454852 DMRT3Q9NQL9 472 aa10.76□□□□□ -0.69
TRAF4-206ENST00000454852 FGFR1OP2Q9NVK5 253 aa10.76□□□□□ -0.69
TRAF4-206ENST00000454852 SIRT5Q9NXA8 310 aa10.76□□□□□ -0.69
TRAF4-206ENST00000454852 SIDT1Q9NXL6 827 aaKnown RBP10.76□□□□□ -0.69
TRAF4-206ENST00000454852 PLCL2Q9UPR0 1127 aa10.76□□□□□ -0.69
TRAF4-206ENST00000454852 APOBEC2Q9Y235 224 aaKnown RBP10.76□□□□□ -0.69
TRAF4-206ENST00000454852 KLHL20Q9Y2M5 609 aa10.76□□□□□ -0.69
TRAF4-206ENST00000454852 USH1CQ9Y6N9 552 aa10.76□□□□□ -0.69
TRAF4-206ENST00000454852 FEZF1A0PJY2 475 aa10.75□□□□□ -0.69
TRAF4-206ENST00000454852 FITM1A5D6W6 292 aa10.75□□□□□ -0.69
TRAF4-206ENST00000454852 ANKDD1BA6NHY2 528 aa10.75□□□□□ -0.69
TRAF4-206ENST00000454852 SLC28A1O00337 649 aa10.75□□□□□ -0.69
TRAF4-206ENST00000454852 FFAR3O14843 346 aa10.75□□□□□ -0.69
TRAF4-206ENST00000454852 GPR42O15529 346 aa10.75□□□□□ -0.69
TRAF4-206ENST00000454852 ZSCAN9O15535 394 aaPredicted RBP10.75□□□□□ -0.69
TRAF4-206ENST00000454852 VPS4BO75351 444 aa10.75□□□□□ -0.69
TRAF4-206ENST00000454852 RASSF9O75901 435 aa10.75□□□□□ -0.69
TRAF4-206ENST00000454852 RSL1D1O76021 490 aaKnown RBP10.75□□□□□ -0.69
TRAF4-206ENST00000454852 PDYNP01213 254 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms