RNA–Protein interactions for RNA: ENST00000451218.6

USP46-202, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5 BASIC

Gene USP46, Length 4,622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-202ENST00000451218 NETO1Q8TDF5 533 aa6.32□□□□□ -1.4
USP46-202ENST00000451218 OR1E3Q8WZA6 343 aa6.32□□□□□ -1.4
USP46-202ENST00000451218 MARVELD3Q96A59 401 aa6.32□□□□□ -1.4
USP46-202ENST00000451218 PPP1R16AQ96I34 528 aa6.32□□□□□ -1.4
USP46-202ENST00000451218 METTL2AQ96IZ6 378 aaKnown RBP6.32□□□□□ -1.4
USP46-202ENST00000451218 TEFMQ96QE5 360 aaKnown RBP6.32□□□□□ -1.4
USP46-202ENST00000451218 SLC2A4RGQ9NR83 387 aa6.32□□□□□ -1.4
USP46-202ENST00000451218 SPHK1Q9NYA1 384 aa6.32□□□□□ -1.4
USP46-202ENST00000451218 TBC1D29Q9UFV1 150 aa6.32□□□□□ -1.4
USP46-202ENST00000451218 TMEFF2Q9UIK5 374 aaPredicted RBP6.32□□□□□ -1.4
USP46-202ENST00000451218 MSRAQ9UJ68 235 aa6.32□□□□□ -1.4
USP46-202ENST00000451218 LRCH1Q9Y2L9 728 aa6.32□□□□□ -1.4
USP46-202ENST00000451218 SNX11Q9Y5W9 270 aa6.32□□□□□ -1.4
USP46-202ENST00000451218 DCHS1Q96JQ0 3298 aa6.32□□□□□ -1.4
USP46-202ENST00000451218 A0A0A6YYD5 115 aa6.32□□□□□ -1.4
USP46-202ENST00000451218 EIF4E1BA6NMX2 242 aaKnown RBP6.32□□□□□ -1.4
USP46-202ENST00000451218 FAM220BPB1ANY3 271 aa6.32□□□□□ -1.4
USP46-202ENST00000451218 GPR89AB7ZAQ6 455 aa6.32□□□□□ -1.4
USP46-202ENST00000451218 H0YJX3 145 aa6.32□□□□□ -1.4
USP46-202ENST00000451218 CFLARO15519 480 aa6.32□□□□□ -1.4
USP46-202ENST00000451218 TNFRSF21O75509 655 aa6.32□□□□□ -1.4
USP46-202ENST00000451218 TIPRLO75663 272 aa6.32□□□□□ -1.4
USP46-202ENST00000451218 EPPINO95925 133 aa6.32□□□□□ -1.4
USP46-202ENST00000451218 RPSAP08865 295 aaKnown RBP6.32□□□□□ -1.4
USP46-202ENST00000451218 GPR89BP0CG08 455 aa6.32□□□□□ -1.4
USP46-202ENST00000451218 HSD3B1P14060 373 aa6.32□□□□□ -1.4
USP46-202ENST00000451218 UQCRBP14927 111 aa6.32□□□□□ -1.4
USP46-202ENST00000451218 CD46P15529 392 aa6.32□□□□□ -1.4
USP46-202ENST00000451218 CYP2A7P20853 494 aa6.32□□□□□ -1.4
USP46-202ENST00000451218 HSD3B2P26439 372 aa6.32□□□□□ -1.4
USP46-202ENST00000451218 RECQLP46063 649 aaPredicted RBP6.32□□□□□ -1.4
USP46-202ENST00000451218 CLCNKAP51800 687 aa6.32□□□□□ -1.4
USP46-202ENST00000451218 COL9A2Q14055 689 aaPredicted RBP6.32□□□□□ -1.4
USP46-202ENST00000451218 CEBPEQ15744 281 aa6.32□□□□□ -1.4
USP46-202ENST00000451218 KIF19Q2TAC6 998 aa6.32□□□□□ -1.4
USP46-202ENST00000451218 COX20Q5RI15 118 aa6.32□□□□□ -1.4
USP46-202ENST00000451218 ZNF425Q6IV72 752 aa6.32□□□□□ -1.4
USP46-202ENST00000451218 PPP4R4Q6NUP7 873 aa6.32□□□□□ -1.4
USP46-202ENST00000451218 ZFP1Q6P2D0 407 aa6.32□□□□□ -1.4
USP46-202ENST00000451218 MSANTD1Q6ZTZ1 278 aa6.32□□□□□ -1.4
USP46-202ENST00000451218 MFSD2AQ8NA29 543 aa6.32□□□□□ -1.4
USP46-202ENST00000451218 PSMA8Q8TAA3 256 aa6.32□□□□□ -1.4
USP46-202ENST00000451218 C1orf216Q8TAB5 229 aa6.32□□□□□ -1.4
USP46-202ENST00000451218 KLK6Q92876 244 aa6.32□□□□□ -1.4
USP46-202ENST00000451218 WFDC6Q9BQY6 131 aa6.32□□□□□ -1.4
USP46-202ENST00000451218 COQ10BQ9H8M1 238 aa6.32□□□□□ -1.4
USP46-202ENST00000451218 TMEM184CQ9NVA4 438 aa6.32□□□□□ -1.4
USP46-202ENST00000451218 NDE1Q9NXR1 346 aa6.32□□□□□ -1.4
USP46-202ENST00000451218 CD207Q9UJ71 328 aa6.32□□□□□ -1.4
USP46-202ENST00000451218 A0A1W2PQU0 124 aa6.32□□□□□ -1.4
USP46-202ENST00000451218 DPPA5A6NC42 116 aa6.32□□□□□ -1.4
USP46-202ENST00000451218 DNAJB6O75190 326 aa6.32□□□□□ -1.4
USP46-202ENST00000451218 KLF8O95600 359 aaPredicted RBP6.32□□□□□ -1.4
USP46-202ENST00000451218 APODP05090 189 aa6.32□□□□□ -1.4
USP46-202ENST00000451218 IL6P05231 212 aa6.32□□□□□ -1.4
USP46-202ENST00000451218 SLC2A4P14672 509 aa6.32□□□□□ -1.4
USP46-202ENST00000451218 GRIA3P42263 894 aa6.32□□□□□ -1.4
USP46-202ENST00000451218 LSSP48449 732 aa6.32□□□□□ -1.4
USP46-202ENST00000451218 TPMTP51580 245 aa6.32□□□□□ -1.4
USP46-202ENST00000451218 CLDN2P57739 230 aa6.32□□□□□ -1.4
USP46-202ENST00000451218 CSNK1G2P78368 415 aa6.32□□□□□ -1.4
USP46-202ENST00000451218 INTS11Q5TA45 600 aaKnown RBP6.32□□□□□ -1.4
USP46-202ENST00000451218 USP30Q70CQ3 517 aa6.32□□□□□ -1.4
USP46-202ENST00000451218 COMMD6Q7Z4G1 85 aa6.32□□□□□ -1.4
USP46-202ENST00000451218 FAM20CQ8IXL6 584 aa6.32□□□□□ -1.4
USP46-202ENST00000451218 GLB1L3Q8NCI6 653 aaPredicted RBP6.32□□□□□ -1.4
USP46-202ENST00000451218 ZFP90Q8TF47 636 aa6.32□□□□□ -1.4
USP46-202ENST00000451218 TFAP2CQ92754 450 aa6.32□□□□□ -1.4
USP46-202ENST00000451218 MBOAT4Q96T53 435 aa6.32□□□□□ -1.4
USP46-202ENST00000451218 EGFL8Q99944 293 aa6.32□□□□□ -1.4
USP46-202ENST00000451218 TIMM29Q9BSF4 260 aa6.32□□□□□ -1.4
USP46-202ENST00000451218 KMT2EQ8IZD2 1858 aa6.32□□□□□ -1.4
USP46-202ENST00000451218 MYO9BQ13459 2157 aa6.31□□□□□ -1.4
USP46-202ENST00000451218 HCRTR1O43613 425 aa6.31□□□□□ -1.4
USP46-202ENST00000451218 TMPRSS11DO60235 418 aa6.31□□□□□ -1.4
USP46-202ENST00000451218 RNGTTO60942 597 aaKnown RBP6.31□□□□□ -1.4
USP46-202ENST00000451218 ASGR2P07307 311 aa6.31□□□□□ -1.4
USP46-202ENST00000451218 C1GALT1C1LP0DN25 315 aa6.31□□□□□ -1.4
USP46-202ENST00000451218 KIAA1024LP59773 190 aa6.31□□□□□ -1.4
USP46-202ENST00000451218 ST8SIA6P61647 398 aa6.31□□□□□ -1.4
USP46-202ENST00000451218 CYBRD1Q53TN4 286 aa6.31□□□□□ -1.4
USP46-202ENST00000451218 ATAT1Q5SQI0 421 aa6.31□□□□□ -1.4
USP46-202ENST00000451218 ZNF776Q68DI1 518 aaPredicted RBP6.31□□□□□ -1.4
USP46-202ENST00000451218 OR4F3Q6IEY1 312 aa6.31□□□□□ -1.4
USP46-202ENST00000451218 ABI3BPQ7Z7G0 1075 aa6.31□□□□□ -1.4
USP46-202ENST00000451218 CIDECQ96AQ7 238 aaPredicted RBP6.31□□□□□ -1.4
USP46-202ENST00000451218 C7orf34Q96L11 122 aa6.31□□□□□ -1.4
USP46-202ENST00000451218 MS4A8Q9BY19 250 aa6.31□□□□□ -1.4
USP46-202ENST00000451218 SLC17A9Q9BYT1 436 aa6.31□□□□□ -1.4
USP46-202ENST00000451218 KLHL4Q9C0H6 718 aa6.31□□□□□ -1.4
USP46-202ENST00000451218 TCEAL2Q9H3H9 227 aaPredicted RBP6.31□□□□□ -1.4
USP46-202ENST00000451218 PREBQ9HCU5 417 aa6.31□□□□□ -1.4
USP46-202ENST00000451218 DCAF13Q9NV06 445 aaKnown RBP6.31□□□□□ -1.4
USP46-202ENST00000451218 RIC8BQ9NVN3 520 aa6.31□□□□□ -1.4
USP46-202ENST00000451218 CLDND1Q9NY35 253 aa6.31□□□□□ -1.4
USP46-202ENST00000451218 VPS29Q9UBQ0 182 aa6.31□□□□□ -1.4
USP46-202ENST00000451218 DYTNA2CJ06 578 aa6.31□□□□□ -1.4
USP46-202ENST00000451218 LYNP07948 512 aa6.31□□□□□ -1.4
USP46-202ENST00000451218 CDH1P12830 882 aa6.31□□□□□ -1.4
USP46-202ENST00000451218 CKMT2P17540 419 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms