RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 ELK4P28324 431 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 IGFALSP35858 605 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 BCAT1P54687 386 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 PKIAP61925 76 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 FGFBP1Q14512 234 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 NTRK2Q16620 822 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 SLC9B1Q4ZJI4 515 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 IFI44LQ53G44 452 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 ZMAT1Q5H9K5 638 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 SYT6Q5T7P8 510 aaPredicted RBP2.14□□□□□ -2.07
USP53-202ENST00000450251 GJB7Q6PEY0 223 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 SLC36A4Q6YBV0 504 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 IL34Q6ZMJ4 242 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 SPATA31D4Q6ZUB0 917 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 ATG9AQ7Z3C6 839 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 LRRTM3Q86VH5 581 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 TMEM200AQ86VY9 491 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 OR6V1Q8N148 313 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 GTPBP8Q8N3Z3 284 aaPredicted RBP2.14□□□□□ -2.07
USP53-202ENST00000450251 TMEM102Q8N9M5 508 aaPredicted RBP2.14□□□□□ -2.07
USP53-202ENST00000450251 OR4F6Q8NGB9 312 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 CSGALNACT1Q8TDX6 532 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 SDR42E1Q8WUS8 393 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 TWIST2Q8WVJ9 160 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 BRI3BPQ8WY22 251 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 RAB39BQ96DA2 213 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 RSPRY1Q96DX4 576 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 RAB3CQ96E17 227 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 SMARCD1Q96GM5 515 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 PYURFQ96I23 114 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 PPP1R16AQ96I34 528 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 TPD52L3Q96J77 140 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 EPYCQ99645 322 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 P2RY13Q9BPV8 354 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 TMEM47Q9BQJ4 181 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 CENPOQ9BU64 300 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 CRB3Q9BUF7 120 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 NIFKQ9BYG3 293 aaKnown RBP2.14□□□□□ -2.07
USP53-202ENST00000450251 RBCK1Q9BYM8 510 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 SLC2A11Q9BYW1 496 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 MTFR1LQ9H019 292 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 COMMD4Q9H0A8 199 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 ARL6Q9H0F7 186 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 CST11Q9H112 138 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 TRPV4Q9HBA0 871 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 NLE1Q9NVX2 485 aaPredicted RBP2.14□□□□□ -2.07
USP53-202ENST00000450251 AHSPQ9NZD4 102 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 IL37Q9NZH6 218 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 EIF2B4Q9UI10 523 aaKnown RBP2.14□□□□□ -2.07
USP53-202ENST00000450251 ZNF225Q9UK10 706 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 MINPP1Q9UNW1 487 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 PCDHGA8Q9Y5G5 932 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 PLIN4Q96Q06 1357 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 SLX4Q8IY92 1834 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 MYH1P12882 1939 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 MYH4Q9Y623 1939 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 CCDC163A0A0D9SF12 145 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 A0A1W2PP18 115 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 A8MV72 311 aaPredicted RBP2.14□□□□□ -2.07
USP53-202ENST00000450251 LEUTXA8MZ59 168 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 GPR25O00155 361 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 OR7A17O14581 309 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 ABCD4O14678 606 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 TXNL1O43396 289 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 FAM155BO75949 473 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 CDRT1O95170 752 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 NDUFB10O96000 172 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 MOCS2O96007 188 aaPredicted RBP2.14□□□□□ -2.07
USP53-202ENST00000450251 CSH1P0DML2 217 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 CSH2P0DML3 217 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 FGF3P11487 239 aaPredicted RBP2.14□□□□□ -2.07
USP53-202ENST00000450251 CYP2A6P11509 494 aaPredicted RBP2.14□□□□□ -2.07
USP53-202ENST00000450251 EPB42P16452 691 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 ALDH4A1P30038 563 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 GPC1P35052 558 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 SOAT1P35610 550 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 AVPR1AP37288 418 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 HTR3AP46098 478 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 GIPRP48546 466 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 NRIP1P48552 1158 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 HCCSP53701 268 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 POU6F2P78424 691 aaPredicted RBP2.14□□□□□ -2.07
USP53-202ENST00000450251 CNTN2Q02246 1040 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 TLE4Q04727 773 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 ARHGAP1Q07960 439 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 LCP2Q13094 533 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 HNRNPA0Q13151 305 aaKnown RBP2.14□□□□□ -2.07
USP53-202ENST00000450251 MXD4Q14582 209 aaPredicted RBP2.14□□□□□ -2.07
USP53-202ENST00000450251 HEPACAMQ14CZ8 416 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 PCLAFQ15004 111 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 TATDN3Q17R31 274 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 ZNF792Q3KQV3 632 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 CRTC2Q53ET0 693 aaPredicted RBP2.14□□□□□ -2.07
USP53-202ENST00000450251 DCAF12L1Q5VU92 463 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 AWAT2Q6E213 333 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 KIAA1324Q6UXG2 1013 aaKnown RBP2.14□□□□□ -2.07
USP53-202ENST00000450251 LINGO2Q7L985 606 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 MRPL52Q86TS9 123 aaKnown RBP2.14□□□□□ -2.07
USP53-202ENST00000450251 SLC47A2Q86VL8 602 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 PAQR7Q86WK9 346 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms