RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 DPY19L1Q2PZI1 675 aa13.68□□□□□ -0.22
USP39-207ENST00000450066 SPATS1Q496A3 300 aa13.68□□□□□ -0.22
USP39-207ENST00000450066 DLEU7Q6UYE1 221 aa13.68□□□□□ -0.22
USP39-207ENST00000450066 ARMCX6Q7L4S7 300 aa13.68□□□□□ -0.22
USP39-207ENST00000450066 TAF8Q7Z7C8 310 aa13.68□□□□□ -0.22
USP39-207ENST00000450066 DHDDSQ86SQ9 333 aa13.68□□□□□ -0.22
USP39-207ENST00000450066 SLC15A3Q8IY34 581 aa13.68□□□□□ -0.22
USP39-207ENST00000450066 GPR156Q8NFN8 814 aa13.68□□□□□ -0.22
USP39-207ENST00000450066 OR2L3Q8NG85 312 aa13.68□□□□□ -0.22
USP39-207ENST00000450066 ASB9Q96DX5 294 aa13.68□□□□□ -0.22
USP39-207ENST00000450066 OR51B5Q9H339 312 aa13.68□□□□□ -0.22
USP39-207ENST00000450066 SRMSQ9H3Y6 488 aa13.68□□□□□ -0.22
USP39-207ENST00000450066 MRPS30Q9NP92 439 aaKnown RBP13.68□□□□□ -0.22
USP39-207ENST00000450066 SPHK1Q9NYA1 384 aa13.68□□□□□ -0.22
USP39-207ENST00000450066 SLAMF8Q9P0V8 285 aa13.68□□□□□ -0.22
USP39-207ENST00000450066 BCAP29Q9UHQ4 241 aa13.68□□□□□ -0.22
USP39-207ENST00000450066 PLXND1Q9Y4D7 1925 aa13.68□□□□□ -0.22
USP39-207ENST00000450066 C15orf38-AP3S2A0A0A6YYH1 394 aa13.68□□□□□ -0.22
USP39-207ENST00000450066 KRT36O76013 467 aa13.68□□□□□ -0.22
USP39-207ENST00000450066 JUNDP17535 347 aa13.68□□□□□ -0.22
USP39-207ENST00000450066 HRH2P25021 359 aa13.68□□□□□ -0.22
USP39-207ENST00000450066 PWP1Q13610 501 aa13.68□□□□□ -0.22
USP39-207ENST00000450066 TRIM25Q14258 630 aaKnown RBP13.68□□□□□ -0.22
USP39-207ENST00000450066 SF1Q15637 639 aaKnown RBP13.68□□□□□ -0.22
USP39-207ENST00000450066 COMMD6Q7Z4G1 85 aa13.68□□□□□ -0.22
USP39-207ENST00000450066 ARPINQ7Z6K5 226 aa13.68□□□□□ -0.22
USP39-207ENST00000450066 TRIM48Q8IWZ4 208 aa13.68□□□□□ -0.22
USP39-207ENST00000450066 KIAA2013Q8IYS2 634 aa13.68□□□□□ -0.22
USP39-207ENST00000450066 METTL4Q8N3J2 472 aa13.68□□□□□ -0.22
USP39-207ENST00000450066 STARD8Q92502 1023 aa13.68□□□□□ -0.22
USP39-207ENST00000450066 GTF2H4Q92759 462 aa13.68□□□□□ -0.22
USP39-207ENST00000450066 SLC22A18Q96BI1 424 aa13.68□□□□□ -0.22
USP39-207ENST00000450066 HSPA12BQ96MM6 686 aa13.68□□□□□ -0.22
USP39-207ENST00000450066 OR52E6Q96RD3 313 aa13.68□□□□□ -0.22
USP39-207ENST00000450066 TWSG1Q9GZX9 223 aa13.68□□□□□ -0.22
USP39-207ENST00000450066 CAAP1Q9H8G2 361 aa13.68□□□□□ -0.22
USP39-207ENST00000450066 POT1Q9NUX5 634 aa13.68□□□□□ -0.22
USP39-207ENST00000450066 TMEM184CQ9NVA4 438 aa13.68□□□□□ -0.22
USP39-207ENST00000450066 NKX1-2Q9UD57 310 aaPredicted RBP13.68□□□□□ -0.22
USP39-207ENST00000450066 APOBEC3BQ9UH17 382 aaKnown RBP13.68□□□□□ -0.22
USP39-207ENST00000450066 MAPRE3Q9UPY8 281 aa13.68□□□□□ -0.22
USP39-207ENST00000450066 PCDHA9Q9Y5H5 950 aa13.68□□□□□ -0.22
USP39-207ENST00000450066 FANCMQ8IYD8 2048 aa13.68□□□□□ -0.22
USP39-207ENST00000450066 FEZF1A0PJY2 475 aa13.67□□□□□ -0.22
USP39-207ENST00000450066 TLR4O00206 839 aa13.67□□□□□ -0.22
USP39-207ENST00000450066 NME4O00746 187 aa13.67□□□□□ -0.22
USP39-207ENST00000450066 ACOT8O14734 319 aa13.67□□□□□ -0.22
USP39-207ENST00000450066 MAP3K7O43318 606 aa13.67□□□□□ -0.22
USP39-207ENST00000450066 PCDH7O60245 1069 aa13.67□□□□□ -0.22
USP39-207ENST00000450066 FKBP6O75344 327 aa13.67□□□□□ -0.22
USP39-207ENST00000450066 BCAS2O75934 225 aaPredicted RBP13.67□□□□□ -0.22
USP39-207ENST00000450066 LRATO95237 230 aa13.67□□□□□ -0.22
USP39-207ENST00000450066 KCNH1O95259 989 aa13.67□□□□□ -0.22
USP39-207ENST00000450066 VIPP01282 170 aa13.67□□□□□ -0.22
USP39-207ENST00000450066 CSF2P04141 144 aa13.67□□□□□ -0.22
USP39-207ENST00000450066 CELA2BP08218 269 aaPredicted RBP13.67□□□□□ -0.22
USP39-207ENST00000450066 MAOBP27338 520 aa13.67□□□□□ -0.22
USP39-207ENST00000450066 CMPK1P30085 196 aa13.67□□□□□ -0.22
USP39-207ENST00000450066 S100A3P33764 101 aa13.67□□□□□ -0.22
USP39-207ENST00000450066 MSX2P35548 267 aaPredicted RBP13.67□□□□□ -0.22
USP39-207ENST00000450066 UBE2IP63279 158 aaKnown RBP13.67□□□□□ -0.22
USP39-207ENST00000450066 MS4A2Q01362 244 aa13.67□□□□□ -0.22
USP39-207ENST00000450066 FLOT2Q14254 428 aa13.67□□□□□ -0.22
USP39-207ENST00000450066 CCDC6Q16204 474 aa13.67□□□□□ -0.22
USP39-207ENST00000450066 MSANTD1Q6ZTZ1 278 aa13.67□□□□□ -0.22
USP39-207ENST00000450066 ADCK2Q7Z695 626 aa13.67□□□□□ -0.22
USP39-207ENST00000450066 ADGRF3Q8IZF5 1079 aa13.67□□□□□ -0.22
USP39-207ENST00000450066 TTLQ8NG68 377 aa13.67□□□□□ -0.22
USP39-207ENST00000450066 DNAJB8Q8NHS0 232 aa13.67□□□□□ -0.22
USP39-207ENST00000450066 C1orf216Q8TAB5 229 aa13.67□□□□□ -0.22
USP39-207ENST00000450066 DNAJB14Q8TBM8 379 aa13.67□□□□□ -0.22
USP39-207ENST00000450066 JPH3Q8WXH2 748 aaPredicted RBP13.67□□□□□ -0.22
USP39-207ENST00000450066 TMEM125Q96AQ2 219 aa13.67□□□□□ -0.22
USP39-207ENST00000450066 TM9SF3Q9HD45 589 aa13.67□□□□□ -0.22
USP39-207ENST00000450066 SLC6A20Q9NP91 592 aa13.67□□□□□ -0.22
USP39-207ENST00000450066 CMTM6Q9NX76 183 aa13.67□□□□□ -0.22
USP39-207ENST00000450066 DLGAP2Q9P1A6 1054 aa13.67□□□□□ -0.22
USP39-207ENST00000450066 CPNE7Q9UBL6 633 aa13.67□□□□□ -0.22
USP39-207ENST00000450066 GNG14A0A1W2PPG7 69 aa13.67□□□□□ -0.22
USP39-207ENST00000450066 TRBC2A0A5B9 178 aa13.67□□□□□ -0.22
USP39-207ENST00000450066 H0Y3Z8 333 aa13.67□□□□□ -0.22
USP39-207ENST00000450066 OR1F1O43749 312 aa13.67□□□□□ -0.22
USP39-207ENST00000450066 SEMA3DO95025 777 aa13.67□□□□□ -0.22
USP39-207ENST00000450066 TBX6O95947 436 aaPredicted RBP13.67□□□□□ -0.22
USP39-207ENST00000450066 HSD17B1P14061 328 aa13.67□□□□□ -0.22
USP39-207ENST00000450066 NME1P15531 152 aaKnown RBP13.67□□□□□ -0.22
USP39-207ENST00000450066 TCN1P20061 433 aaPredicted RBP13.67□□□□□ -0.22
USP39-207ENST00000450066 GRK3P35626 688 aa13.67□□□□□ -0.22
USP39-207ENST00000450066 ZXDAP98168 799 aa13.67□□□□□ -0.22
USP39-207ENST00000450066 SRSF11Q05519 484 aaKnown RBP13.67□□□□□ -0.22
USP39-207ENST00000450066 GPR18Q14330 331 aa13.67□□□□□ -0.22
USP39-207ENST00000450066 KIR2DS3Q14952 304 aa13.67□□□□□ -0.22
USP39-207ENST00000450066 PLCL1Q15111 1095 aa13.67□□□□□ -0.22
USP39-207ENST00000450066 RCN1Q15293 331 aa13.67□□□□□ -0.22
USP39-207ENST00000450066 PRRT3Q5FWE3 981 aa13.67□□□□□ -0.22
USP39-207ENST00000450066 DEPDC1Q5TB30 811 aa13.67□□□□□ -0.22
USP39-207ENST00000450066 KHDRBS2Q5VWX1 349 aaKnown RBP13.67□□□□□ -0.22
USP39-207ENST00000450066 NANOGP8Q6NSW7 305 aa13.67□□□□□ -0.22
USP39-207ENST00000450066 AAGABQ6PD74 315 aa13.67□□□□□ -0.22
USP39-207ENST00000450066 FAM156AQ8NDB6 213 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms