RNA–Protein interactions for RNA: ENST00000449980.1

TRO-216, Transcript of trophinin, humanhuman

TSL 4

Gene TRO, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRO-216ENST00000449980 PCDHGB3Q9Y5G1 929 aa5.04□□□□□ -1.6
TRO-216ENST00000449980 DUSP10Q9Y6W6 482 aa5.04□□□□□ -1.6
TRO-216ENST00000449980 ANKHD1Q8IWZ3 2542 aaKnown RBP5.04□□□□□ -1.6
TRO-216ENST00000449980 FBN3Q75N90 2809 aa5.04□□□□□ -1.6
TRO-216ENST00000449980 TNRC6AQ8NDV7 1962 aaKnown RBP5.04□□□□□ -1.6
TRO-216ENST00000449980 ZNF106Q9H2Y7 1883 aaKnown RBP5.03□□□□□ -1.6
TRO-216ENST00000449980 CROCCQ5TZA2 2017 aa5.03□□□□□ -1.6
TRO-216ENST00000449980 A0A0A6YYC8 382 aaPredicted RBP5.03□□□□□ -1.6
TRO-216ENST00000449980 FAM90A27PA6NNH2 459 aa5.03□□□□□ -1.6
TRO-216ENST00000449980 HSPB2A8KAH6 182 aa5.03□□□□□ -1.6
TRO-216ENST00000449980 I3L1I5 382 aaPredicted RBP5.03□□□□□ -1.6
TRO-216ENST00000449980 PRMT5O14744 637 aaPredicted RBP5.03□□□□□ -1.6
TRO-216ENST00000449980 PEX1O43933 1283 aa5.03□□□□□ -1.6
TRO-216ENST00000449980 SUSD5O60279 629 aa5.03□□□□□ -1.6
TRO-216ENST00000449980 WDR1O75083 606 aa5.03□□□□□ -1.6
TRO-216ENST00000449980 SEC24DO94855 1032 aaPredicted RBP5.03□□□□□ -1.6
TRO-216ENST00000449980 C1orf105O95561 183 aa5.03□□□□□ -1.6
TRO-216ENST00000449980 TFEBP19484 476 aa5.03□□□□□ -1.6
TRO-216ENST00000449980 CHRM3P20309 590 aa5.03□□□□□ -1.6
TRO-216ENST00000449980 ADRA1DP25100 572 aa5.03□□□□□ -1.6
TRO-216ENST00000449980 ACVR2AP27037 513 aa5.03□□□□□ -1.6
TRO-216ENST00000449980 RBL1P28749 1068 aa5.03□□□□□ -1.6
TRO-216ENST00000449980 ATP5DP30049 168 aa5.03□□□□□ -1.6
TRO-216ENST00000449980 HOXC12P31275 282 aa5.03□□□□□ -1.6
TRO-216ENST00000449980 GRK3P35626 688 aa5.03□□□□□ -1.6
TRO-216ENST00000449980 BCL6P41182 706 aa5.03□□□□□ -1.6
TRO-216ENST00000449980 CDKN1CP49918 316 aaPredicted RBP5.03□□□□□ -1.6
TRO-216ENST00000449980 OR4D2P58180 307 aa5.03□□□□□ -1.6
TRO-216ENST00000449980 RPS15AP62244 130 aaKnown RBP5.03□□□□□ -1.6
TRO-216ENST00000449980 PRAMEP78395 509 aa5.03□□□□□ -1.6
TRO-216ENST00000449980 HERC3Q15034 1050 aa5.03□□□□□ -1.6
TRO-216ENST00000449980 HSPB2Q16082 182 aa5.03□□□□□ -1.6
TRO-216ENST00000449980 GXYLT1Q4G148 440 aa5.03□□□□□ -1.6
TRO-216ENST00000449980 FASTKD1Q53R41 847 aaKnown RBP5.03□□□□□ -1.6
TRO-216ENST00000449980 E4F1Q66K89 784 aaPredicted RBP5.03□□□□□ -1.6
TRO-216ENST00000449980 DENND5AQ6IQ26 1287 aa5.03□□□□□ -1.6
TRO-216ENST00000449980 PAPD4Q6PIY7 484 aaKnown RBP5.03□□□□□ -1.6
TRO-216ENST00000449980 SUSD1Q6UWL2 747 aa5.03□□□□□ -1.6
TRO-216ENST00000449980 PRSS57Q6UWY2 283 aa5.03□□□□□ -1.6
TRO-216ENST00000449980 C3P1Q6ZMU1 363 aa5.03□□□□□ -1.6
TRO-216ENST00000449980 ARHGEF18Q6ZSZ5 1173 aa5.03□□□□□ -1.6
TRO-216ENST00000449980 KIAA0408Q6ZU52 694 aa5.03□□□□□ -1.6
TRO-216ENST00000449980 BBS12Q6ZW61 710 aa5.03□□□□□ -1.6
TRO-216ENST00000449980 ANKRD37Q7Z713 158 aa5.03□□□□□ -1.6
TRO-216ENST00000449980 SDCCAG8Q86SQ7 713 aaPredicted RBP5.03□□□□□ -1.6
TRO-216ENST00000449980 CD163Q86VB7 1156 aa5.03□□□□□ -1.6
TRO-216ENST00000449980 SLC22A16Q86VW1 577 aa5.03□□□□□ -1.6
TRO-216ENST00000449980 CCDC50Q8IVM0 306 aa5.03□□□□□ -1.6
TRO-216ENST00000449980 ZC3H7AQ8IWR0 971 aaKnown RBP5.03□□□□□ -1.6
TRO-216ENST00000449980 KATNAL2Q8IYT4 538 aa5.03□□□□□ -1.6
TRO-216ENST00000449980 ARMC10Q8N2F6 343 aa5.03□□□□□ -1.6
TRO-216ENST00000449980 C2orf73Q8N5S3 287 aaPredicted RBP5.03□□□□□ -1.6
TRO-216ENST00000449980 TBC1D19Q8N5T2 526 aa5.03□□□□□ -1.6
TRO-216ENST00000449980 TMEM156Q8N614 296 aa5.03□□□□□ -1.6
TRO-216ENST00000449980 AMER3Q8N944 861 aa5.03□□□□□ -1.6
TRO-216ENST00000449980 ZFP62Q8NB50 900 aaPredicted RBP5.03□□□□□ -1.6
TRO-216ENST00000449980 CAMKVQ8NCB2 501 aa5.03□□□□□ -1.6
TRO-216ENST00000449980 LRRN4CLQ8ND94 238 aa5.03□□□□□ -1.6
TRO-216ENST00000449980 OR8K1Q8NGG5 319 aa5.03□□□□□ -1.6
TRO-216ENST00000449980 OR9A1PQ8NGU1 263 aa5.03□□□□□ -1.6
TRO-216ENST00000449980 OR6P1Q8NGX9 317 aa5.03□□□□□ -1.6
TRO-216ENST00000449980 OR4L1Q8NH43 312 aa5.03□□□□□ -1.6
TRO-216ENST00000449980 ELP5Q8TE02 316 aa5.03□□□□□ -1.6
TRO-216ENST00000449980 SARAFQ96BY9 339 aa5.03□□□□□ -1.6
TRO-216ENST00000449980 C10orf90Q96M02 699 aa5.03□□□□□ -1.6
TRO-216ENST00000449980 SPATA13Q96N96 652 aa5.03□□□□□ -1.6
TRO-216ENST00000449980 OR2A5Q96R48 311 aa5.03□□□□□ -1.6
TRO-216ENST00000449980 NRTNQ99748 197 aa5.03□□□□□ -1.6
TRO-216ENST00000449980 DEFB126Q9BYW3 111 aa5.03□□□□□ -1.6
TRO-216ENST00000449980 UCK2Q9BZX2 261 aa5.03□□□□□ -1.6
TRO-216ENST00000449980 TSPAN10Q9H1Z9 355 aaPredicted RBP5.03□□□□□ -1.6
TRO-216ENST00000449980 GSX1Q9H4S2 264 aaPredicted RBP5.03□□□□□ -1.6
TRO-216ENST00000449980 ANKHQ9HCJ1 492 aa5.03□□□□□ -1.6
TRO-216ENST00000449980 TMEM184CQ9NVA4 438 aa5.03□□□□□ -1.6
TRO-216ENST00000449980 ANKRD10Q9NXR5 420 aa5.03□□□□□ -1.6
TRO-216ENST00000449980 IMPACTQ9P2X3 320 aa5.03□□□□□ -1.6
TRO-216ENST00000449980 MTRF1LQ9UGC7 380 aaKnown RBP5.03□□□□□ -1.6
TRO-216ENST00000449980 PLAGL1Q9UM63 463 aa5.03□□□□□ -1.6
TRO-216ENST00000449980 RUVBL1Q9Y265 456 aaKnown RBP5.03□□□□□ -1.6
TRO-216ENST00000449980 L3MBTL1Q9Y468 752 aa5.03□□□□□ -1.6
TRO-216ENST00000449980 SLC22A7Q9Y694 548 aa5.03□□□□□ -1.6
TRO-216ENST00000449980 MYO7BQ6PIF6 2116 aa5.03□□□□□ -1.6
TRO-216ENST00000449980 MED13LQ71F56 2210 aa5.03□□□□□ -1.6
TRO-216ENST00000449980 CNTRLQ7Z7A1 2325 aa5.02□□□□□ -1.61
TRO-216ENST00000449980 PIKFYVEQ9Y2I7 2098 aa5.02□□□□□ -1.61
TRO-216ENST00000449980 hCG_1818297A0A087WSY0 165 aa5.02□□□□□ -1.61
TRO-216ENST00000449980 NKX2-6A6NCS4 301 aa5.02□□□□□ -1.61
TRO-216ENST00000449980 GOLGA6L9A6NEM1 432 aa5.02□□□□□ -1.61
TRO-216ENST00000449980 URADA6NGE7 173 aa5.02□□□□□ -1.61
TRO-216ENST00000449980 A6NNC1 897 aa5.02□□□□□ -1.61
TRO-216ENST00000449980 DVL2O14641 736 aa5.02□□□□□ -1.61
TRO-216ENST00000449980 FOXS1O43638 330 aa5.02□□□□□ -1.61
TRO-216ENST00000449980 CDC40O60508 579 aaKnown RBP eCLIP5.02□□□□□ -1.61
TRO-216ENST00000449980 NDUFS3O75489 264 aa5.02□□□□□ -1.61
TRO-216ENST00000449980 IFNA2P01563 188 aa5.02□□□□□ -1.61
TRO-216ENST00000449980 CATP04040 527 aaKnown RBP5.02□□□□□ -1.61
TRO-216ENST00000449980 TUBB4AP04350 444 aa5.02□□□□□ -1.61
TRO-216ENST00000449980 PTMAP06454 111 aaKnown RBP5.02□□□□□ -1.61
TRO-216ENST00000449980 RBP3P10745 1247 aa5.02□□□□□ -1.61
TRO-216ENST00000449980 EPXP11678 715 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms