RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 C3orf30Q96M34 536 aa14.03□□□□□ -0.16
TNF-208ENST00000449264 FCRL4Q96PJ5 515 aa14.03□□□□□ -0.16
TNF-208ENST00000449264 RAB33BQ9H082 229 aa14.03□□□□□ -0.16
TNF-208ENST00000449264 LRRN3Q9H3W5 708 aa14.03□□□□□ -0.16
TNF-208ENST00000449264 MEAF6Q9HAF1 191 aa14.03□□□□□ -0.16
TNF-208ENST00000449264 SOHLH2Q9NX45 425 aa14.03□□□□□ -0.16
TNF-208ENST00000449264 EPHA6Q9UF33 1036 aa14.03□□□□□ -0.16
TNF-208ENST00000449264 A0A0J9YVX5 310 aa14.02□□□□□ -0.16
TNF-208ENST00000449264 TRBC2A0A5B9 178 aa14.02□□□□□ -0.16
TNF-208ENST00000449264 OR2A25A4D2G3 310 aa14.02□□□□□ -0.16
TNF-208ENST00000449264 SDHDO14521 159 aa14.02□□□□□ -0.16
TNF-208ENST00000449264 LCMT2O60294 686 aaKnown RBP14.02□□□□□ -0.16
TNF-208ENST00000449264 FOXD2O60548 495 aaPredicted RBP14.02□□□□□ -0.16
TNF-208ENST00000449264 SERPIND1P05546 499 aa14.02□□□□□ -0.16
TNF-208ENST00000449264 IDH3AP50213 366 aa14.02□□□□□ -0.16
TNF-208ENST00000449264 INHBCP55103 352 aa14.02□□□□□ -0.16
TNF-208ENST00000449264 PHEXP78562 749 aa14.02□□□□□ -0.16
TNF-208ENST00000449264 HMGCS1Q01581 520 aa14.02□□□□□ -0.16
TNF-208ENST00000449264 NHLH1Q02575 133 aa14.02□□□□□ -0.16
TNF-208ENST00000449264 ZIC1Q15915 447 aa14.02□□□□□ -0.16
TNF-208ENST00000449264 STPG1Q5TH74 334 aa14.02□□□□□ -0.16
TNF-208ENST00000449264 CACHD1Q5VU97 1274 aa14.02□□□□□ -0.16
TNF-208ENST00000449264 PIGWQ7Z7B1 504 aa14.02□□□□□ -0.16
TNF-208ENST00000449264 CHCHD4Q8N4Q1 142 aa14.02□□□□□ -0.16
TNF-208ENST00000449264 OR2T11Q8NH01 316 aa14.02□□□□□ -0.16
TNF-208ENST00000449264 ZUFSPQ96AP4 578 aa14.02□□□□□ -0.16
TNF-208ENST00000449264 TUBGCP3Q96CW5 907 aa14.02□□□□□ -0.16
TNF-208ENST00000449264 RILPQ96NA2 401 aa14.02□□□□□ -0.16
TNF-208ENST00000449264 TRAPPC9Q96Q05 1148 aa14.02□□□□□ -0.16
TNF-208ENST00000449264 OR52B2Q96RD2 323 aa14.02□□□□□ -0.16
TNF-208ENST00000449264 CD180Q99467 661 aa14.02□□□□□ -0.16
TNF-208ENST00000449264 PFDN4Q9NQP4 134 aa14.02□□□□□ -0.16
TNF-208ENST00000449264 C1GALT1Q9NS00 363 aa14.02□□□□□ -0.16
TNF-208ENST00000449264 ANKMY1Q9P2S6 941 aa14.02□□□□□ -0.16
TNF-208ENST00000449264 GIMAP2Q9UG22 337 aa14.02□□□□□ -0.16
TNF-208ENST00000449264 MN1Q10571 1320 aaPredicted RBP14.02□□□□□ -0.17
TNF-208ENST00000449264 IGHV5-51A0A0C4DH38 117 aa14.01□□□□□ -0.17
TNF-208ENST00000449264 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.01□□□□□ -0.17
TNF-208ENST00000449264 ANKDD1BA6NHY2 528 aa14.01□□□□□ -0.17
TNF-208ENST00000449264 A8MU76 341 aa14.01□□□□□ -0.17
TNF-208ENST00000449264 MAGEB17A8MXT2 336 aa14.01□□□□□ -0.17
TNF-208ENST00000449264 TNFSF14O43557 240 aa14.01□□□□□ -0.17
TNF-208ENST00000449264 CTSVO60911 334 aa14.01□□□□□ -0.17
TNF-208ENST00000449264 CPNE6O95741 557 aa14.01□□□□□ -0.17
TNF-208ENST00000449264 EZRP15311 586 aaKnown RBP14.01□□□□□ -0.17
TNF-208ENST00000449264 ACP1P24666 158 aa14.01□□□□□ -0.17
TNF-208ENST00000449264 SCTRP47872 440 aa14.01□□□□□ -0.17
TNF-208ENST00000449264 SEPHS1P49903 392 aa14.01□□□□□ -0.17
TNF-208ENST00000449264 RPS15AP62244 130 aaKnown RBP14.01□□□□□ -0.17
TNF-208ENST00000449264 NR6A1Q15406 480 aa14.01□□□□□ -0.17
TNF-208ENST00000449264 DEFB110Q30KQ9 67 aa14.01□□□□□ -0.17
TNF-208ENST00000449264 GALNTL6Q49A17 601 aa14.01□□□□□ -0.17
TNF-208ENST00000449264 XKR7Q5GH72 579 aa14.01□□□□□ -0.17
TNF-208ENST00000449264 WDR74Q6RFH5 385 aaPredicted RBP14.01□□□□□ -0.17
TNF-208ENST00000449264 ACAD11Q709F0 780 aa14.01□□□□□ -0.17
TNF-208ENST00000449264 TMPRSS9Q7Z410 1059 aa14.01□□□□□ -0.17
TNF-208ENST00000449264 ACPTQ9BZG2 426 aa14.01□□□□□ -0.17
TNF-208ENST00000449264 PITHD1Q9GZP4 211 aaPredicted RBP14.01□□□□□ -0.17
TNF-208ENST00000449264 SYNPO2LQ9H987 977 aa14.01□□□□□ -0.17
TNF-208ENST00000449264 TCF7L2Q9NQB0 619 aa14.01□□□□□ -0.17
TNF-208ENST00000449264 DMRT3Q9NQL9 472 aa14.01□□□□□ -0.17
TNF-208ENST00000449264 RAPGEFL1Q9UHV5 662 aa14.01□□□□□ -0.17
TNF-208ENST00000449264 E9PBE3 544 aa14.01□□□□□ -0.17
TNF-208ENST00000449264 RGS14O43566 566 aa14.01□□□□□ -0.17
TNF-208ENST00000449264 KLHL41O60662 606 aa14.01□□□□□ -0.17
TNF-208ENST00000449264 CBFA2T3O75081 653 aa14.01□□□□□ -0.17
TNF-208ENST00000449264 C9P02748 559 aa14.01□□□□□ -0.17
TNF-208ENST00000449264 MLLT3P42568 568 aaPredicted RBP14.01□□□□□ -0.17
TNF-208ENST00000449264 ACADVLP49748 655 aa14.01□□□□□ -0.17
TNF-208ENST00000449264 RPS13P62277 151 aaKnown RBP14.01□□□□□ -0.17
TNF-208ENST00000449264 VN1R5Q7Z5H4 357 aa14.01□□□□□ -0.17
TNF-208ENST00000449264 SEC16BQ96JE7 1060 aa14.01□□□□□ -0.17
TNF-208ENST00000449264 GFM1Q96RP9 751 aaKnown RBP14.01□□□□□ -0.17
TNF-208ENST00000449264 ZFYVE21Q9BQ24 234 aa14.01□□□□□ -0.17
TNF-208ENST00000449264 NT5DC2Q9H857 520 aa14.01□□□□□ -0.17
TNF-208ENST00000449264 RIC8BQ9NVN3 520 aa14.01□□□□□ -0.17
TNF-208ENST00000449264 SLC12A4Q9UP95 1085 aa14.01□□□□□ -0.17
TNF-208ENST00000449264 APOBEC2Q9Y235 224 aaKnown RBP14.01□□□□□ -0.17
TNF-208ENST00000449264 PCDHGA4Q9Y5G9 962 aa14.01□□□□□ -0.17
TNF-208ENST00000449264 KLK4Q9Y5K2 254 aa14.01□□□□□ -0.17
TNF-208ENST00000449264 ADAMTS20P59510 1910 aa14□□□□□ -0.17
TNF-208ENST00000449264 SLC28A1O00337 649 aa14□□□□□ -0.17
TNF-208ENST00000449264 NDUFS4O43181 175 aa14□□□□□ -0.17
TNF-208ENST00000449264 PEX11AO75192 247 aa14□□□□□ -0.17
TNF-208ENST00000449264 ETHE1O95571 254 aa14□□□□□ -0.17
TNF-208ENST00000449264 TGFB1P01137 390 aa14□□□□□ -0.17
TNF-208ENST00000449264 ARL4DP49703 201 aa14□□□□□ -0.17
TNF-208ENST00000449264 CSTF3Q12996 717 aaKnown RBP14□□□□□ -0.17
TNF-208ENST00000449264 SPIDRQ14159 915 aa14□□□□□ -0.17
TNF-208ENST00000449264 LSM12Q3MHD2 195 aaKnown RBP14□□□□□ -0.17
TNF-208ENST00000449264 SPDYAQ5MJ70 313 aa14□□□□□ -0.17
TNF-208ENST00000449264 C10orf62Q5T681 223 aaPredicted RBP14□□□□□ -0.17
TNF-208ENST00000449264 TMEM71Q6P5X7 295 aa14□□□□□ -0.17
TNF-208ENST00000449264 ALYREFQ86V81 257 aaKnown RBP14□□□□□ -0.17
TNF-208ENST00000449264 CACNA2D3Q8IZS8 1091 aa14□□□□□ -0.17
TNF-208ENST00000449264 MFSD9Q8NBP5 474 aa14□□□□□ -0.17
TNF-208ENST00000449264 CCDC197Q8NCU1 140 aa14□□□□□ -0.17
TNF-208ENST00000449264 TTLQ8NG68 377 aa14□□□□□ -0.17
TNF-208ENST00000449264 MAELQ96JY0 434 aaKnown RBP14□□□□□ -0.17
TNF-208ENST00000449264 CCT7Q99832 543 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms