RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 ADNP2Q6IQ32 1131 aa18.47■□□□□ 0.55
RPS28-202ENST00000449223 FIGLAQ6QHK4 219 aa18.47■□□□□ 0.55
RPS28-202ENST00000449223 SCIMPQ6UWF3 145 aa18.47■□□□□ 0.55
RPS28-202ENST00000449223 ADCK2Q7Z695 626 aa18.47■□□□□ 0.55
RPS28-202ENST00000449223 TRIM73Q86UV7 250 aa18.47■□□□□ 0.55
RPS28-202ENST00000449223 ALYREFQ86V81 257 aaKnown RBP18.47■□□□□ 0.55
RPS28-202ENST00000449223 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.47■□□□□ 0.55
RPS28-202ENST00000449223 THAP11Q96EK4 314 aa18.47■□□□□ 0.55
RPS28-202ENST00000449223 PPP3R2Q96LZ3 170 aa18.47■□□□□ 0.55
RPS28-202ENST00000449223 MTERF1Q99551 399 aaKnown RBP18.47■□□□□ 0.55
RPS28-202ENST00000449223 MYLK2Q9H1R3 596 aa18.47■□□□□ 0.55
RPS28-202ENST00000449223 MRGBPQ9NV56 204 aa18.47■□□□□ 0.55
RPS28-202ENST00000449223 PILRAQ9UKJ1 303 aa18.47■□□□□ 0.55
RPS28-202ENST00000449223 BTBD3Q9Y2F9 522 aa18.47■□□□□ 0.55
RPS28-202ENST00000449223 PCDHGA4Q9Y5G9 962 aa18.47■□□□□ 0.55
RPS28-202ENST00000449223 FEZF1A0PJY2 475 aa18.46■□□□□ 0.55
RPS28-202ENST00000449223 CAPN5O15484 640 aaPredicted RBP18.46■□□□□ 0.55
RPS28-202ENST00000449223 LCMT2O60294 686 aaKnown RBP18.46■□□□□ 0.55
RPS28-202ENST00000449223 NRP2O60462 931 aa18.46■□□□□ 0.55
RPS28-202ENST00000449223 CCDC22O60826 627 aa18.46■□□□□ 0.55
RPS28-202ENST00000449223 CLEC3AO75596 197 aa18.46■□□□□ 0.55
RPS28-202ENST00000449223 TBX6O95947 436 aaPredicted RBP18.46■□□□□ 0.55
RPS28-202ENST00000449223 ACPPP15309 386 aa18.46■□□□□ 0.55
RPS28-202ENST00000449223 LBPP18428 481 aa18.46■□□□□ 0.55
RPS28-202ENST00000449223 TGM1P22735 817 aa18.46■□□□□ 0.55
RPS28-202ENST00000449223 BCL6P41182 706 aa18.46■□□□□ 0.55
RPS28-202ENST00000449223 SPEM2Q0P670 501 aa18.46■□□□□ 0.55
RPS28-202ENST00000449223 CLPPQ16740 277 aaPredicted RBP18.46■□□□□ 0.55
RPS28-202ENST00000449223 ATP6AP1LQ52LC2 224 aa18.46■□□□□ 0.55
RPS28-202ENST00000449223 SPDYAQ5MJ70 313 aa18.46■□□□□ 0.55
RPS28-202ENST00000449223 FAM91A1Q658Y4 838 aa18.46■□□□□ 0.55
RPS28-202ENST00000449223 RNF44Q7L0R7 432 aa18.46■□□□□ 0.55
RPS28-202ENST00000449223 PLXDC1Q8IUK5 500 aa18.46■□□□□ 0.55
RPS28-202ENST00000449223 MFSD9Q8NBP5 474 aa18.46■□□□□ 0.55
RPS28-202ENST00000449223 C11orf24Q96F05 449 aaPredicted RBP18.46■□□□□ 0.55
RPS28-202ENST00000449223 AHCYL2Q96HN2 611 aaKnown RBP18.46■□□□□ 0.55
RPS28-202ENST00000449223 TRAPPC9Q96Q05 1148 aa18.46■□□□□ 0.55
RPS28-202ENST00000449223 ZNF385DQ9H6B1 395 aa18.46■□□□□ 0.55
RPS28-202ENST00000449223 VPS29Q9UBQ0 182 aa18.46■□□□□ 0.55
RPS28-202ENST00000449223 ZFP69BQ9UJL9 534 aa18.46■□□□□ 0.55
RPS28-202ENST00000449223 HCN4Q9Y3Q4 1203 aa18.46■□□□□ 0.55
RPS28-202ENST00000449223 AP1M2Q9Y6Q5 423 aa18.46■□□□□ 0.55
RPS28-202ENST00000449223 ASCC3Q8N3C0 2202 aaKnown RBP18.45■□□□□ 0.54
RPS28-202ENST00000449223 ANKDD1BA6NHY2 528 aa18.45■□□□□ 0.54
RPS28-202ENST00000449223 PROB1E7EW31 1015 aa18.45■□□□□ 0.54
RPS28-202ENST00000449223 E9PBE3 544 aa18.45■□□□□ 0.54
RPS28-202ENST00000449223 OR1F1O43749 312 aa18.45■□□□□ 0.54
RPS28-202ENST00000449223 KLHL41O60662 606 aa18.45■□□□□ 0.54
RPS28-202ENST00000449223 PCNAP12004 261 aa18.45■□□□□ 0.54
RPS28-202ENST00000449223 MYF5P13349 255 aa18.45■□□□□ 0.54
RPS28-202ENST00000449223 CD59P13987 128 aa18.45■□□□□ 0.54
RPS28-202ENST00000449223 MRPL19P49406 292 aaKnown RBP18.45■□□□□ 0.54
RPS28-202ENST00000449223 ERVK-8P63133 956 aa18.45■□□□□ 0.54
RPS28-202ENST00000449223 HMGCS1Q01581 520 aa18.45■□□□□ 0.54
RPS28-202ENST00000449223 CFHR1Q03591 330 aa18.45■□□□□ 0.54
RPS28-202ENST00000449223 KIAA0040Q15053 153 aa18.45■□□□□ 0.54
RPS28-202ENST00000449223 NR6A1Q15406 480 aa18.45■□□□□ 0.54
RPS28-202ENST00000449223 IMPG1Q17R60 797 aa18.45■□□□□ 0.54
RPS28-202ENST00000449223 SGO1Q5FBB7 561 aa18.45■□□□□ 0.54
RPS28-202ENST00000449223 PERM1Q5SV97 790 aa18.45■□□□□ 0.54
RPS28-202ENST00000449223 IRGCQ6NXR0 463 aa18.45■□□□□ 0.54
RPS28-202ENST00000449223 C6orf89Q6UWU4 347 aa18.45■□□□□ 0.54
RPS28-202ENST00000449223 MTFMTQ96DP5 389 aaKnown RBP18.45■□□□□ 0.54
RPS28-202ENST00000449223 CMTM7Q96FZ5 175 aa18.45■□□□□ 0.54
RPS28-202ENST00000449223 PPM1MQ96MI6 270 aa18.45■□□□□ 0.54
RPS28-202ENST00000449223 LRRC37BQ96QE4 947 aa18.45■□□□□ 0.54
RPS28-202ENST00000449223 EDEM2Q9BV94 578 aa18.45■□□□□ 0.54
RPS28-202ENST00000449223 NMUR2Q9GZQ4 415 aa18.45■□□□□ 0.54
RPS28-202ENST00000449223 TMEM9BQ9NQ34 198 aa18.45■□□□□ 0.54
RPS28-202ENST00000449223 SIRT5Q9NXA8 310 aa18.45■□□□□ 0.54
RPS28-202ENST00000449223 ASIC5Q9NY37 505 aa18.45■□□□□ 0.54
RPS28-202ENST00000449223 TMED5Q9Y3A6 229 aa18.45■□□□□ 0.54
RPS28-202ENST00000449223 UNC13CQ8NB66 2214 aa18.45■□□□□ 0.54
RPS28-202ENST00000449223 CTSVO60911 334 aa18.44■□□□□ 0.54
RPS28-202ENST00000449223 GP1BAP07359 652 aa18.44■□□□□ 0.54
RPS28-202ENST00000449223 ST6GAL1P15907 406 aa18.44■□□□□ 0.54
RPS28-202ENST00000449223 PCSK2P16519 638 aa18.44■□□□□ 0.54
RPS28-202ENST00000449223 ACP1P24666 158 aa18.44■□□□□ 0.54
RPS28-202ENST00000449223 PTX3P26022 381 aaPredicted RBP18.44■□□□□ 0.54
RPS28-202ENST00000449223 CSF2RBP32927 897 aa18.44■□□□□ 0.54
RPS28-202ENST00000449223 GFERP55789 205 aa18.44■□□□□ 0.54
RPS28-202ENST00000449223 EMX2Q04743 252 aa18.44■□□□□ 0.54
RPS28-202ENST00000449223 MAD2L1Q13257 205 aaPredicted RBP18.44■□□□□ 0.54
RPS28-202ENST00000449223 CUL3Q13618 768 aa18.44■□□□□ 0.54
RPS28-202ENST00000449223 RBBP5Q15291 538 aaKnown RBP18.44■□□□□ 0.54
RPS28-202ENST00000449223 NKAIN2Q5VXU1 208 aa18.44■□□□□ 0.54
RPS28-202ENST00000449223 NXNQ6DKJ4 435 aa18.44■□□□□ 0.54
RPS28-202ENST00000449223 FBXO42Q6P3S6 717 aa18.44■□□□□ 0.54
RPS28-202ENST00000449223 SPATA19Q7Z5L4 167 aa18.44■□□□□ 0.54
RPS28-202ENST00000449223 MTDHQ86UE4 582 aaKnown RBP18.44■□□□□ 0.54
RPS28-202ENST00000449223 ZFAND4Q86XD8 727 aa18.44■□□□□ 0.54
RPS28-202ENST00000449223 PARP9Q8IXQ6 854 aa18.44■□□□□ 0.54
RPS28-202ENST00000449223 RNF175Q8N4F7 328 aa18.44■□□□□ 0.54
RPS28-202ENST00000449223 CPSF7Q8N684 471 aaKnown RBP18.44■□□□□ 0.54
RPS28-202ENST00000449223 C19orf47Q8N9M1 422 aaKnown RBP18.44■□□□□ 0.54
RPS28-202ENST00000449223 TRPV3Q8NET8 790 aa18.44■□□□□ 0.54
RPS28-202ENST00000449223 CREB3L4Q8TEY5 395 aa18.44■□□□□ 0.54
RPS28-202ENST00000449223 NCSTNQ92542 709 aa18.44■□□□□ 0.54
RPS28-202ENST00000449223 FCRL1Q96LA6 429 aa18.44■□□□□ 0.54
RPS28-202ENST00000449223 OR2A5Q96R48 311 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms