RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 RFWD2Q8NHY2 731 aa13.46□□□□□ -0.25
SHMT2-203ENST00000449049 HUS1BQ8NHY5 278 aa13.46□□□□□ -0.25
SHMT2-203ENST00000449049 WDR48Q8TAF3 677 aa13.46□□□□□ -0.25
SHMT2-203ENST00000449049 SELENOMQ8WWX9 145 aa13.46□□□□□ -0.25
SHMT2-203ENST00000449049 STON2Q8WXE9 905 aa13.46□□□□□ -0.25
SHMT2-203ENST00000449049 C19orf60Q96EN9 201 aa13.46□□□□□ -0.25
SHMT2-203ENST00000449049 TCTN2Q96GX1 697 aa13.46□□□□□ -0.25
SHMT2-203ENST00000449049 SEC16BQ96JE7 1060 aa13.46□□□□□ -0.25
SHMT2-203ENST00000449049 GFM1Q96RP9 751 aaKnown RBP13.46□□□□□ -0.25
SHMT2-203ENST00000449049 CCT8L2Q96SF2 557 aa13.46□□□□□ -0.25
SHMT2-203ENST00000449049 NUF2Q9BZD4 464 aa13.46□□□□□ -0.25
SHMT2-203ENST00000449049 FAM107BQ9H098 131 aa13.46□□□□□ -0.25
SHMT2-203ENST00000449049 KCNK13Q9HB14 408 aa13.46□□□□□ -0.25
SHMT2-203ENST00000449049 KLHL3Q9UH77 587 aa13.46□□□□□ -0.25
SHMT2-203ENST00000449049 RAPGEFL1Q9UHV5 662 aa13.46□□□□□ -0.25
SHMT2-203ENST00000449049 ADGRE2Q9UHX3 823 aa13.46□□□□□ -0.25
SHMT2-203ENST00000449049 BTRCQ9Y297 605 aa13.46□□□□□ -0.25
SHMT2-203ENST00000449049 PCDHGA4Q9Y5G9 962 aa13.46□□□□□ -0.25
SHMT2-203ENST00000449049 SNRNP200O75643 2136 aaKnown RBP13.46□□□□□ -0.25
SHMT2-203ENST00000449049 TRPC5OSA6NMA1 111 aa13.46□□□□□ -0.26
SHMT2-203ENST00000449049 OR1F1O43749 312 aa13.46□□□□□ -0.26
SHMT2-203ENST00000449049 PRAMEF10O60809 474 aa13.46□□□□□ -0.26
SHMT2-203ENST00000449049 CTSVO60911 334 aa13.46□□□□□ -0.26
SHMT2-203ENST00000449049 ZBTB11O95625 1053 aaPredicted RBP13.46□□□□□ -0.26
SHMT2-203ENST00000449049 ANKRD34CP0C6C1 535 aa13.46□□□□□ -0.26
SHMT2-203ENST00000449049 PCNAP12004 261 aa13.46□□□□□ -0.26
SHMT2-203ENST00000449049 AHRP35869 848 aa13.46□□□□□ -0.26
SHMT2-203ENST00000449049 PIK3CBP42338 1070 aa13.46□□□□□ -0.26
SHMT2-203ENST00000449049 RBBP5Q15291 538 aaKnown RBP13.46□□□□□ -0.26
SHMT2-203ENST00000449049 XKR7Q5GH72 579 aa13.46□□□□□ -0.26
SHMT2-203ENST00000449049 KMT5CQ86Y97 462 aa13.46□□□□□ -0.26
SHMT2-203ENST00000449049 MFSD9Q8NBP5 474 aa13.46□□□□□ -0.26
SHMT2-203ENST00000449049 TTLQ8NG68 377 aa13.46□□□□□ -0.26
SHMT2-203ENST00000449049 ZNF473Q8WTR7 871 aaKnown RBP13.46□□□□□ -0.26
SHMT2-203ENST00000449049 THAP11Q96EK4 314 aa13.46□□□□□ -0.26
SHMT2-203ENST00000449049 THOC1Q96FV9 657 aaKnown RBP13.46□□□□□ -0.26
SHMT2-203ENST00000449049 ZFYVE21Q9BQ24 234 aa13.46□□□□□ -0.26
SHMT2-203ENST00000449049 ZNF768Q9H5H4 540 aaKnown RBP13.46□□□□□ -0.26
SHMT2-203ENST00000449049 SYNPO2LQ9H987 977 aa13.46□□□□□ -0.26
SHMT2-203ENST00000449049 PPT2Q9UMR5 302 aa13.46□□□□□ -0.26
SHMT2-203ENST00000449049 PTGDR2Q9Y5Y4 395 aa13.46□□□□□ -0.26
SHMT2-203ENST00000449049 CUL9Q8IWT3 2517 aa13.45□□□□□ -0.26
SHMT2-203ENST00000449049 ADAMTS20P59510 1910 aa13.45□□□□□ -0.26
SHMT2-203ENST00000449049 D6RAR5 112 aa13.45□□□□□ -0.26
SHMT2-203ENST00000449049 FOXE1O00358 373 aaPredicted RBP13.45□□□□□ -0.26
SHMT2-203ENST00000449049 RASSF9O75901 435 aa13.45□□□□□ -0.26
SHMT2-203ENST00000449049 THRAP10827 490 aa13.45□□□□□ -0.26
SHMT2-203ENST00000449049 HSD3B1P14060 373 aa13.45□□□□□ -0.26
SHMT2-203ENST00000449049 HSD3B2P26439 372 aa13.45□□□□□ -0.26
SHMT2-203ENST00000449049 NEK2P51955 445 aa13.45□□□□□ -0.26
SHMT2-203ENST00000449049 AQP5P55064 265 aa13.45□□□□□ -0.26
SHMT2-203ENST00000449049 CSTF3Q12996 717 aaKnown RBP13.45□□□□□ -0.26
SHMT2-203ENST00000449049 SGO1Q5FBB7 561 aa13.45□□□□□ -0.26
SHMT2-203ENST00000449049 VWA5B1Q5TIE3 1220 aa13.45□□□□□ -0.26
SHMT2-203ENST00000449049 FOXR1Q6PIV2 292 aa13.45□□□□□ -0.26
SHMT2-203ENST00000449049 EPGNQ6UW88 154 aa13.45□□□□□ -0.26
SHMT2-203ENST00000449049 DDIASQ8IXT1 998 aa13.45□□□□□ -0.26
SHMT2-203ENST00000449049 KLHL6Q8WZ60 621 aa13.45□□□□□ -0.26
SHMT2-203ENST00000449049 MTFMTQ96DP5 389 aaKnown RBP13.45□□□□□ -0.26
SHMT2-203ENST00000449049 SLC41A2Q96JW4 573 aa13.45□□□□□ -0.26
SHMT2-203ENST00000449049 MAELQ96JY0 434 aaKnown RBP13.45□□□□□ -0.26
SHMT2-203ENST00000449049 C3orf30Q96M34 536 aa13.45□□□□□ -0.26
SHMT2-203ENST00000449049 OR2A5Q96R48 311 aa13.45□□□□□ -0.26
SHMT2-203ENST00000449049 ELAC2Q9BQ52 826 aaKnown RBP13.45□□□□□ -0.26
SHMT2-203ENST00000449049 RABEP2Q9H5N1 569 aa13.45□□□□□ -0.26
SHMT2-203ENST00000449049 SYNDIG1Q9H7V2 258 aa13.45□□□□□ -0.26
SHMT2-203ENST00000449049 BRF2Q9HAW0 419 aa13.45□□□□□ -0.26
SHMT2-203ENST00000449049 FAM60AQ9NP50 221 aa13.45□□□□□ -0.26
SHMT2-203ENST00000449049 DMRT3Q9NQL9 472 aa13.45□□□□□ -0.26
SHMT2-203ENST00000449049 PFDN4Q9NQP4 134 aa13.45□□□□□ -0.26
SHMT2-203ENST00000449049 ZFP69BQ9UJL9 534 aa13.45□□□□□ -0.26
SHMT2-203ENST00000449049 CCL27Q9Y4X3 112 aa13.45□□□□□ -0.26
SHMT2-203ENST00000449049 PCDHGA1Q9Y5H4 931 aa13.45□□□□□ -0.26
SHMT2-203ENST00000449049 AP1M2Q9Y6Q5 423 aa13.45□□□□□ -0.26
SHMT2-203ENST00000449049 FRYLO94915 3013 aa13.45□□□□□ -0.26
SHMT2-203ENST00000449049 IGHV5-10-1A0A0J9YXX1 117 aa13.45□□□□□ -0.26
SHMT2-203ENST00000449049 SDHDO14521 159 aa13.45□□□□□ -0.26
SHMT2-203ENST00000449049 SNX3O60493 162 aa13.45□□□□□ -0.26
SHMT2-203ENST00000449049 RFPL3O75679 317 aa13.45□□□□□ -0.26
SHMT2-203ENST00000449049 LINC00032P0C843 101 aa13.45□□□□□ -0.26
SHMT2-203ENST00000449049 CORO7P57737 925 aa13.45□□□□□ -0.26
SHMT2-203ENST00000449049 PHEXP78562 749 aa13.45□□□□□ -0.26
SHMT2-203ENST00000449049 SPIDRQ14159 915 aa13.45□□□□□ -0.26
SHMT2-203ENST00000449049 SCIMPQ6UWF3 145 aa13.45□□□□□ -0.26
SHMT2-203ENST00000449049 SPATA21Q7Z572 469 aa13.45□□□□□ -0.26
SHMT2-203ENST00000449049 PIGWQ7Z7B1 504 aa13.45□□□□□ -0.26
SHMT2-203ENST00000449049 SLITRK4Q8IW52 837 aa13.45□□□□□ -0.26
SHMT2-203ENST00000449049 DNAJC22Q8N4W6 341 aa13.45□□□□□ -0.26
SHMT2-203ENST00000449049 GBP7Q8N8V2 638 aaPredicted RBP13.45□□□□□ -0.26
SHMT2-203ENST00000449049 NETO1Q8TDF5 533 aa13.45□□□□□ -0.26
SHMT2-203ENST00000449049 C10orf82Q8WW14 230 aa13.45□□□□□ -0.26
SHMT2-203ENST00000449049 HBEGFQ99075 208 aa13.45□□□□□ -0.26
SHMT2-203ENST00000449049 MTERF1Q99551 399 aaKnown RBP13.45□□□□□ -0.26
SHMT2-203ENST00000449049 TOR4AQ9NXH8 423 aa13.45□□□□□ -0.26
SHMT2-203ENST00000449049 DCTN4Q9UJW0 460 aa13.45□□□□□ -0.26
SHMT2-203ENST00000449049 MUC6Q6W4X9 2439 aa13.45□□□□□ -0.26
SHMT2-203ENST00000449049 ANKDD1BA6NHY2 528 aa13.44□□□□□ -0.26
SHMT2-203ENST00000449049 MAGEB17A8MXT2 336 aa13.44□□□□□ -0.26
SHMT2-203ENST00000449049 SLC28A1O00337 649 aa13.44□□□□□ -0.26
SHMT2-203ENST00000449049 CLEC3AO75596 197 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms