RNA–Protein interactions for RNA: ENST00000448770.5

POLR1B-209, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 2,494 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-209ENST00000448770 C1orf226A1L170 272 aa13.19□□□□□ -0.3
POLR1B-209ENST00000448770 TMEM88BA6NKF7 163 aa13.19□□□□□ -0.3
POLR1B-209ENST00000448770 NPIPB8E9PQR5 432 aa13.19□□□□□ -0.3
POLR1B-209ENST00000448770 TLL1O43897 1013 aa13.19□□□□□ -0.3
POLR1B-209ENST00000448770 PCDH7O60245 1069 aa13.19□□□□□ -0.3
POLR1B-209ENST00000448770 STSP08842 583 aa13.19□□□□□ -0.3
POLR1B-209ENST00000448770 CST5P28325 142 aaPredicted RBP13.19□□□□□ -0.3
POLR1B-209ENST00000448770 NSG1P42857 185 aa13.19□□□□□ -0.3
POLR1B-209ENST00000448770 CLK1P49759 484 aaKnown RBP13.19□□□□□ -0.3
POLR1B-209ENST00000448770 RAE1P78406 368 aaKnown RBP13.19□□□□□ -0.3
POLR1B-209ENST00000448770 PTSQ03393 145 aa13.19□□□□□ -0.3
POLR1B-209ENST00000448770 CDC20Q12834 499 aa13.19□□□□□ -0.3
POLR1B-209ENST00000448770 TIGD6Q17RP2 521 aa13.19□□□□□ -0.3
POLR1B-209ENST00000448770 ATAD3BQ5T9A4 648 aa13.19□□□□□ -0.3
POLR1B-209ENST00000448770 SPATC1Q76KD6 591 aa13.19□□□□□ -0.3
POLR1B-209ENST00000448770 SLC5A8Q8N695 610 aa13.19□□□□□ -0.3
POLR1B-209ENST00000448770 C11orf24Q96F05 449 aaPredicted RBP13.19□□□□□ -0.3
POLR1B-209ENST00000448770 SAMD11Q96NU1 681 aa13.19□□□□□ -0.3
POLR1B-209ENST00000448770 FKBP14Q9NWM8 211 aa13.19□□□□□ -0.3
POLR1B-209ENST00000448770 ZDHHC3Q9NYG2 299 aa13.19□□□□□ -0.3
POLR1B-209ENST00000448770 TRPM5Q9NZQ8 1165 aa13.19□□□□□ -0.3
POLR1B-209ENST00000448770 CD84Q9UIB8 345 aa13.19□□□□□ -0.3
POLR1B-209ENST00000448770 LYVE1Q9Y5Y7 322 aa13.19□□□□□ -0.3
POLR1B-209ENST00000448770 MANSC4A6NHS7 340 aaPredicted RBP13.19□□□□□ -0.3
POLR1B-209ENST00000448770 NRG2O14511 850 aaPredicted RBP13.19□□□□□ -0.3
POLR1B-209ENST00000448770 PRPS1L1P21108 318 aa13.19□□□□□ -0.3
POLR1B-209ENST00000448770 OR1E2P47887 323 aa13.19□□□□□ -0.3
POLR1B-209ENST00000448770 SF3B4Q15427 424 aaKnown RBP eCLIP13.19□□□□□ -0.3
POLR1B-209ENST00000448770 LRIT3Q3SXY7 679 aa13.19□□□□□ -0.3
POLR1B-209ENST00000448770 COX20Q5RI15 118 aa13.19□□□□□ -0.3
POLR1B-209ENST00000448770 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.19□□□□□ -0.3
POLR1B-209ENST00000448770 ZNF783Q6ZMS7 281 aa13.19□□□□□ -0.3
POLR1B-209ENST00000448770 OR52J3Q8NH60 311 aa13.19□□□□□ -0.3
POLR1B-209ENST00000448770 C2orf15Q8WU43 125 aaKnown RBP13.19□□□□□ -0.3
POLR1B-209ENST00000448770 IPCEF1Q8WWN9 437 aaPredicted RBP13.19□□□□□ -0.3
POLR1B-209ENST00000448770 Q96MT0 163 aa13.19□□□□□ -0.3
POLR1B-209ENST00000448770 TMEM121BQ9BXQ6 578 aaPredicted RBP13.19□□□□□ -0.3
POLR1B-209ENST00000448770 NDUFAF4Q9P032 175 aa13.19□□□□□ -0.3
POLR1B-209ENST00000448770 FAM8A1Q9UBU6 413 aa13.19□□□□□ -0.3
POLR1B-209ENST00000448770 FZD4Q9ULV1 537 aa13.19□□□□□ -0.3
POLR1B-209ENST00000448770 EXO1Q9UQ84 846 aaKnown RBP13.19□□□□□ -0.3
POLR1B-209ENST00000448770 LOC100506127A0A0U1RQW1 187 aa13.18□□□□□ -0.3
POLR1B-209ENST00000448770 TMEM202A6NGA9 273 aa13.18□□□□□ -0.3
POLR1B-209ENST00000448770 E7EQ34 232 aa13.18□□□□□ -0.3
POLR1B-209ENST00000448770 H7C4K7 107 aa13.18□□□□□ -0.3
POLR1B-209ENST00000448770 BNIP3LO60238 219 aa13.18□□□□□ -0.3
POLR1B-209ENST00000448770 NTRK1P04629 796 aa13.18□□□□□ -0.3
POLR1B-209ENST00000448770 ADORA3P0DMS8 318 aa13.18□□□□□ -0.3
POLR1B-209ENST00000448770 GABRB1P18505 474 aa13.18□□□□□ -0.3
POLR1B-209ENST00000448770 CD70P32970 193 aa13.18□□□□□ -0.3
POLR1B-209ENST00000448770 GGT2P36268 569 aa13.18□□□□□ -0.3
POLR1B-209ENST00000448770 CTSKP43235 329 aa13.18□□□□□ -0.3
POLR1B-209ENST00000448770 NR4A2P43354 598 aa13.18□□□□□ -0.3
POLR1B-209ENST00000448770 HNRNPFP52597 415 aaKnown RBP13.18□□□□□ -0.3
POLR1B-209ENST00000448770 CYP4F2P78329 520 aa13.18□□□□□ -0.3
POLR1B-209ENST00000448770 IFITM2Q01629 132 aa13.18□□□□□ -0.3
POLR1B-209ENST00000448770 TP53BP2Q13625 1128 aa13.18□□□□□ -0.3
POLR1B-209ENST00000448770 TBCEQ15813 527 aaPredicted RBP13.18□□□□□ -0.3
POLR1B-209ENST00000448770 GPR33Q49SQ1 333 aa13.18□□□□□ -0.3
POLR1B-209ENST00000448770 CCSMST1Q4G0I0 132 aa13.18□□□□□ -0.3
POLR1B-209ENST00000448770 ZNF385BQ569K4 471 aa13.18□□□□□ -0.3
POLR1B-209ENST00000448770 MSANTD1Q6ZTZ1 278 aa13.18□□□□□ -0.3
POLR1B-209ENST00000448770 LACC1Q8IV20 430 aa13.18□□□□□ -0.3
POLR1B-209ENST00000448770 NAGSQ8N159 534 aa13.18□□□□□ -0.3
POLR1B-209ENST00000448770 SCAIQ8N9R8 606 aa13.18□□□□□ -0.3
POLR1B-209ENST00000448770 POC5Q8NA72 575 aa13.18□□□□□ -0.3
POLR1B-209ENST00000448770 OR8J2Q8NGG1 315 aa13.18□□□□□ -0.3
POLR1B-209ENST00000448770 WDR20Q8TBZ3 569 aa13.18□□□□□ -0.3
POLR1B-209ENST00000448770 NXF2Q9GZY0 626 aaKnown RBP13.18□□□□□ -0.3
POLR1B-209ENST00000448770 TMED5Q9Y3A6 229 aa13.18□□□□□ -0.3
POLR1B-209ENST00000448770 PCDHB11Q9Y5F2 797 aa13.18□□□□□ -0.3
POLR1B-209ENST00000448770 PCDHGA2Q9Y5H1 932 aa13.18□□□□□ -0.3
POLR1B-209ENST00000448770 GABRR3A8MPY1 467 aa13.18□□□□□ -0.3
POLR1B-209ENST00000448770 J3KTA2 159 aa13.18□□□□□ -0.3
POLR1B-209ENST00000448770 CDK1P06493 297 aa13.18□□□□□ -0.3
POLR1B-209ENST00000448770 C1SP09871 688 aa13.18□□□□□ -0.3
POLR1B-209ENST00000448770 HLA-EP13747 358 aa13.18□□□□□ -0.3
POLR1B-209ENST00000448770 UGT2B10P36537 528 aa13.18□□□□□ -0.3
POLR1B-209ENST00000448770 BMPR1AP36894 532 aa13.18□□□□□ -0.3
POLR1B-209ENST00000448770 MVDP53602 400 aa13.18□□□□□ -0.3
POLR1B-209ENST00000448770 SMARCB1Q12824 385 aa13.18□□□□□ -0.3
POLR1B-209ENST00000448770 ZNF648Q5T619 568 aaPredicted RBP13.18□□□□□ -0.3
POLR1B-209ENST00000448770 DESI1Q6ICB0 168 aa13.18□□□□□ -0.3
POLR1B-209ENST00000448770 UTS2BQ765I0 119 aa13.18□□□□□ -0.3
POLR1B-209ENST00000448770 PARP16Q8N5Y8 322 aa13.18□□□□□ -0.3
POLR1B-209ENST00000448770 ARL14EPQ8N8R7 260 aaPredicted RBP13.18□□□□□ -0.3
POLR1B-209ENST00000448770 OVCA2Q8WZ82 227 aa13.18□□□□□ -0.3
POLR1B-209ENST00000448770 COPS8Q99627 209 aa13.18□□□□□ -0.3
POLR1B-209ENST00000448770 EPYCQ99645 322 aa13.18□□□□□ -0.3
POLR1B-209ENST00000448770 ZNF334Q9HCZ1 680 aaPredicted RBP13.18□□□□□ -0.3
POLR1B-209ENST00000448770 DNAJC11Q9NVH1 559 aa13.18□□□□□ -0.3
POLR1B-209ENST00000448770 TSC22D4Q9Y3Q8 395 aa13.18□□□□□ -0.3
POLR1B-209ENST00000448770 YIPF1Q9Y548 306 aa13.18□□□□□ -0.3
POLR1B-209ENST00000448770 PCDHB7Q9Y5E2 793 aa13.18□□□□□ -0.3
POLR1B-209ENST00000448770 PCDHGA3Q9Y5H0 932 aa13.18□□□□□ -0.3
POLR1B-209ENST00000448770 IGLV3-16A0A075B6K0 115 aa13.17□□□□□ -0.3
POLR1B-209ENST00000448770 TBKBP1A7MCY6 615 aa13.17□□□□□ -0.3
POLR1B-209ENST00000448770 SGTAO43765 313 aa13.17□□□□□ -0.3
POLR1B-209ENST00000448770 NUAK1O60285 661 aa13.17□□□□□ -0.3
POLR1B-209ENST00000448770 CBSLP0DN79 551 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms