RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 SYNDIG1Q9H7V2 258 aa18.72■□□□□ 0.59
SGCE-207ENST00000447873 RIC8BQ9NVN3 520 aa18.72■□□□□ 0.59
SGCE-207ENST00000447873 TSC22D4Q9Y3Q8 395 aa18.72■□□□□ 0.59
SGCE-207ENST00000447873 ZFHX2Q9C0A1 2572 aaPredicted RBP18.72■□□□□ 0.59
SGCE-207ENST00000447873 SLC9B1P1A6NJY1 282 aa18.72■□□□□ 0.59
SGCE-207ENST00000447873 SLC28A1O00337 649 aa18.72■□□□□ 0.59
SGCE-207ENST00000447873 SDHDO14521 159 aa18.72■□□□□ 0.59
SGCE-207ENST00000447873 RGS14O43566 566 aa18.72■□□□□ 0.59
SGCE-207ENST00000447873 KIF1CO43896 1103 aaKnown RBP18.72■□□□□ 0.59
SGCE-207ENST00000447873 LCMT2O60294 686 aaKnown RBP18.72■□□□□ 0.59
SGCE-207ENST00000447873 GDF9O60383 454 aa18.72■□□□□ 0.59
SGCE-207ENST00000447873 RASSF9O75901 435 aa18.72■□□□□ 0.59
SGCE-207ENST00000447873 CPNE6O95741 557 aa18.72■□□□□ 0.59
SGCE-207ENST00000447873 EZRP15311 586 aaKnown RBP18.72■□□□□ 0.59
SGCE-207ENST00000447873 ACP1P24666 158 aa18.72■□□□□ 0.59
SGCE-207ENST00000447873 PIK3CBP42338 1070 aa18.72■□□□□ 0.59
SGCE-207ENST00000447873 SCTRP47872 440 aa18.72■□□□□ 0.59
SGCE-207ENST00000447873 RPS15AP62244 130 aaKnown RBP18.72■□□□□ 0.59
SGCE-207ENST00000447873 SQSTM1Q13501 440 aa18.72■□□□□ 0.59
SGCE-207ENST00000447873 XKR7Q5GH72 579 aa18.72■□□□□ 0.59
SGCE-207ENST00000447873 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.72■□□□□ 0.59
SGCE-207ENST00000447873 ANKRD53Q8N9V6 530 aa18.72■□□□□ 0.59
SGCE-207ENST00000447873 TTLQ8NG68 377 aa18.72■□□□□ 0.59
SGCE-207ENST00000447873 TUBGCP3Q96CW5 907 aa18.72■□□□□ 0.59
SGCE-207ENST00000447873 MAELQ96JY0 434 aaKnown RBP18.72■□□□□ 0.59
SGCE-207ENST00000447873 SARGQ9BW04 601 aa18.72■□□□□ 0.59
SGCE-207ENST00000447873 RHBGQ9H310 441 aa18.72■□□□□ 0.59
SGCE-207ENST00000447873 TCF7L2Q9NQB0 619 aa18.72■□□□□ 0.59
SGCE-207ENST00000447873 ADGRE2Q9UHX3 823 aa18.72■□□□□ 0.59
SGCE-207ENST00000447873 ARL2BPQ9Y2Y0 163 aa18.72■□□□□ 0.59
SGCE-207ENST00000447873 MN1Q10571 1320 aaPredicted RBP18.71■□□□□ 0.59
SGCE-207ENST00000447873 A0A1W2PQM1 296 aa18.71■□□□□ 0.59
SGCE-207ENST00000447873 SERTM1A2A2V5 107 aa18.71■□□□□ 0.59
SGCE-207ENST00000447873 MAGEB17A8MXT2 336 aa18.71■□□□□ 0.59
SGCE-207ENST00000447873 FOXE1O00358 373 aaPredicted RBP18.71■□□□□ 0.59
SGCE-207ENST00000447873 CASC3O15234 703 aaKnown RBP18.71■□□□□ 0.59
SGCE-207ENST00000447873 VPS4BO75351 444 aa18.71■□□□□ 0.59
SGCE-207ENST00000447873 C9P02748 559 aa18.71■□□□□ 0.59
SGCE-207ENST00000447873 HOXB3P14651 431 aaPredicted RBP18.71■□□□□ 0.59
SGCE-207ENST00000447873 SERPINB1P30740 379 aa18.71■□□□□ 0.59
SGCE-207ENST00000447873 BCL6P41182 706 aa18.71■□□□□ 0.59
SGCE-207ENST00000447873 CYP4F3Q08477 520 aa18.71■□□□□ 0.59
SGCE-207ENST00000447873 CSTF3Q12996 717 aaKnown RBP18.71■□□□□ 0.59
SGCE-207ENST00000447873 TERF2Q15554 542 aa18.71■□□□□ 0.59
SGCE-207ENST00000447873 NXNQ6DKJ4 435 aa18.71■□□□□ 0.59
SGCE-207ENST00000447873 CARFQ8N187 725 aa18.71■□□□□ 0.59
SGCE-207ENST00000447873 RNF175Q8N4F7 328 aa18.71■□□□□ 0.59
SGCE-207ENST00000447873 GBP7Q8N8V2 638 aaPredicted RBP18.71■□□□□ 0.59
SGCE-207ENST00000447873 C19orf47Q8N9M1 422 aaKnown RBP18.71■□□□□ 0.59
SGCE-207ENST00000447873 MFSD9Q8NBP5 474 aa18.71■□□□□ 0.59
SGCE-207ENST00000447873 CCDC197Q8NCU1 140 aa18.71■□□□□ 0.59
SGCE-207ENST00000447873 SEC16BQ96JE7 1060 aa18.71■□□□□ 0.59
SGCE-207ENST00000447873 OR52B2Q96RD2 323 aa18.71■□□□□ 0.59
SGCE-207ENST00000447873 NUDT22Q9BRQ3 303 aa18.71■□□□□ 0.59
SGCE-207ENST00000447873 BRF2Q9HAW0 419 aa18.71■□□□□ 0.59
SGCE-207ENST00000447873 ATXN7L1Q9ULK2 861 aaPredicted RBP18.71■□□□□ 0.59
SGCE-207ENST00000447873 PCDHGA4Q9Y5G9 962 aa18.71■□□□□ 0.59
SGCE-207ENST00000447873 MAP3K7O43318 606 aa18.7■□□□□ 0.58
SGCE-207ENST00000447873 PRAMEF10O60809 474 aa18.7■□□□□ 0.58
SGCE-207ENST00000447873 CTSVO60911 334 aa18.7■□□□□ 0.58
SGCE-207ENST00000447873 GP1BAP07359 652 aa18.7■□□□□ 0.58
SGCE-207ENST00000447873 HSD3B1P14060 373 aa18.7■□□□□ 0.58
SGCE-207ENST00000447873 HSD3B2P26439 372 aa18.7■□□□□ 0.58
SGCE-207ENST00000447873 GSTM2P28161 218 aa18.7■□□□□ 0.58
SGCE-207ENST00000447873 AHRP35869 848 aa18.7■□□□□ 0.58
SGCE-207ENST00000447873 CYP4F2P78329 520 aa18.7■□□□□ 0.58
SGCE-207ENST00000447873 HMGCS1Q01581 520 aa18.7■□□□□ 0.58
SGCE-207ENST00000447873 GABPB1Q06547 395 aaPredicted RBP18.7■□□□□ 0.58
SGCE-207ENST00000447873 NR6A1Q15406 480 aa18.7■□□□□ 0.58
SGCE-207ENST00000447873 ZIC1Q15915 447 aa18.7■□□□□ 0.58
SGCE-207ENST00000447873 SNAP47Q5SQN1 464 aa18.7■□□□□ 0.58
SGCE-207ENST00000447873 STPG1Q5TH74 334 aa18.7■□□□□ 0.58
SGCE-207ENST00000447873 CACHD1Q5VU97 1274 aa18.7■□□□□ 0.58
SGCE-207ENST00000447873 FBXO42Q6P3S6 717 aa18.7■□□□□ 0.58
SGCE-207ENST00000447873 TMEM71Q6P5X7 295 aa18.7■□□□□ 0.58
SGCE-207ENST00000447873 Q6ZSR9 355 aa18.7■□□□□ 0.58
SGCE-207ENST00000447873 CACNA2D3Q8IZS8 1091 aa18.7■□□□□ 0.58
SGCE-207ENST00000447873 ANKS4BQ8N8V4 417 aa18.7■□□□□ 0.58
SGCE-207ENST00000447873 OR2T11Q8NH01 316 aa18.7■□□□□ 0.58
SGCE-207ENST00000447873 CEP70Q8NHQ1 597 aa18.7■□□□□ 0.58
SGCE-207ENST00000447873 ACTRT2Q8TDY3 377 aa18.7■□□□□ 0.58
SGCE-207ENST00000447873 STON2Q8WXE9 905 aa18.7■□□□□ 0.58
SGCE-207ENST00000447873 PHOX2BQ99453 314 aa18.7■□□□□ 0.58
SGCE-207ENST00000447873 ACPTQ9BZG2 426 aa18.7■□□□□ 0.58
SGCE-207ENST00000447873 AKTIPQ9H8T0 292 aa18.7■□□□□ 0.58
SGCE-207ENST00000447873 DMRT3Q9NQL9 472 aa18.7■□□□□ 0.58
SGCE-207ENST00000447873 TMEM9Q9P0T7 183 aa18.7■□□□□ 0.58
SGCE-207ENST00000447873 ZFP69BQ9UJL9 534 aa18.7■□□□□ 0.58
SGCE-207ENST00000447873 ZNF292O60281 2723 aa18.7■□□□□ 0.58
SGCE-207ENST00000447873 IGHV5-51A0A0C4DH38 117 aa18.69■□□□□ 0.58
SGCE-207ENST00000447873 A0A0J9YVX5 310 aa18.69■□□□□ 0.58
SGCE-207ENST00000447873 CBFA2T3O75081 653 aa18.69■□□□□ 0.58
SGCE-207ENST00000447873 ZBTB11O95625 1053 aaPredicted RBP18.69■□□□□ 0.58
SGCE-207ENST00000447873 RPS13P62277 151 aaKnown RBP18.69■□□□□ 0.58
SGCE-207ENST00000447873 RELAQ04206 551 aa18.69■□□□□ 0.58
SGCE-207ENST00000447873 LSM12Q3MHD2 195 aaKnown RBP18.69■□□□□ 0.58
SGCE-207ENST00000447873 GALNTL6Q49A17 601 aa18.69■□□□□ 0.58
SGCE-207ENST00000447873 LARP4Q71RC2 724 aaKnown RBP eCLIP18.69■□□□□ 0.58
SGCE-207ENST00000447873 VN1R5Q7Z5H4 357 aa18.69■□□□□ 0.58
SGCE-207ENST00000447873 TCTN2Q96GX1 697 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms