RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 I3L1I5 382 aaPredicted RBP14.11□□□□□ -0.15
HDAC4-204ENST00000446876 UBXN8O00124 270 aa14.11□□□□□ -0.15
HDAC4-204ENST00000446876 TK2O00142 265 aa14.11□□□□□ -0.15
HDAC4-204ENST00000446876 MASP2O00187 686 aa14.11□□□□□ -0.15
HDAC4-204ENST00000446876 RIPK2O43353 540 aa14.11□□□□□ -0.15
HDAC4-204ENST00000446876 FOXS1O43638 330 aa14.11□□□□□ -0.15
HDAC4-204ENST00000446876 OR1F1O43749 312 aa14.11□□□□□ -0.15
HDAC4-204ENST00000446876 SUPT3HO75486 399 aa14.11□□□□□ -0.15
HDAC4-204ENST00000446876 ONECUT2O95948 504 aa14.11□□□□□ -0.15
HDAC4-204ENST00000446876 FBLP22087 321 aaKnown RBP14.11□□□□□ -0.15
HDAC4-204ENST00000446876 TYK2P29597 1187 aa14.11□□□□□ -0.15
HDAC4-204ENST00000446876 GRK3P35626 688 aa14.11□□□□□ -0.15
HDAC4-204ENST00000446876 MSH2P43246 934 aa14.11□□□□□ -0.15
HDAC4-204ENST00000446876 HNMTP50135 292 aa14.11□□□□□ -0.15
HDAC4-204ENST00000446876 PMS2P54278 862 aa14.11□□□□□ -0.15
HDAC4-204ENST00000446876 REEP5Q00765 189 aa14.11□□□□□ -0.15
HDAC4-204ENST00000446876 KCNAB2Q13303 367 aa14.11□□□□□ -0.15
HDAC4-204ENST00000446876 NKG7Q16617 165 aa14.11□□□□□ -0.15
HDAC4-204ENST00000446876 SYT16Q17RD7 645 aa14.11□□□□□ -0.15
HDAC4-204ENST00000446876 PRSS41Q7RTY9 318 aa14.11□□□□□ -0.15
HDAC4-204ENST00000446876 ASPGQ86U10 573 aa14.11□□□□□ -0.15
HDAC4-204ENST00000446876 ZNF843Q8N446 348 aa14.11□□□□□ -0.15
HDAC4-204ENST00000446876 KCT2Q8NC54 265 aa14.11□□□□□ -0.15
HDAC4-204ENST00000446876 OR4K1Q8NGD4 311 aa14.11□□□□□ -0.15
HDAC4-204ENST00000446876 OR2Y1Q8NGV0 311 aa14.11□□□□□ -0.15
HDAC4-204ENST00000446876 FKBP10Q96AY3 582 aa14.11□□□□□ -0.15
HDAC4-204ENST00000446876 MOCOSQ96EN8 888 aa14.11□□□□□ -0.15
HDAC4-204ENST00000446876 MMABQ96EY8 250 aaPredicted RBP14.11□□□□□ -0.15
HDAC4-204ENST00000446876 ATOH8Q96SQ7 321 aa14.11□□□□□ -0.15
HDAC4-204ENST00000446876 SPSB2Q99619 263 aa14.11□□□□□ -0.15
HDAC4-204ENST00000446876 TXLNGYQ9BZA5 131 aa14.11□□□□□ -0.15
HDAC4-204ENST00000446876 FAM117AQ9C073 453 aa14.11□□□□□ -0.15
HDAC4-204ENST00000446876 VPS11Q9H270 941 aa14.11□□□□□ -0.15
HDAC4-204ENST00000446876 NMRAL1Q9HBL8 299 aa14.11□□□□□ -0.15
HDAC4-204ENST00000446876 TLK1Q9UKI8 766 aa14.11□□□□□ -0.15
HDAC4-204ENST00000446876 KCNE1BA0A087WTH5 132 aa14.1□□□□□ -0.15
HDAC4-204ENST00000446876 EXOC1LA0A1B0GW35 172 aa14.1□□□□□ -0.15
HDAC4-204ENST00000446876 TRBC2A0A5B9 178 aa14.1□□□□□ -0.15
HDAC4-204ENST00000446876 KERAO60938 352 aa14.1□□□□□ -0.15
HDAC4-204ENST00000446876 S100BP04271 92 aaPredicted RBP14.1□□□□□ -0.15
HDAC4-204ENST00000446876 SERPIND1P05546 499 aa14.1□□□□□ -0.15
HDAC4-204ENST00000446876 ABHD2P08910 425 aa14.1□□□□□ -0.15
HDAC4-204ENST00000446876 PIM1P11309 404 aaPredicted RBP14.1□□□□□ -0.15
HDAC4-204ENST00000446876 IL1RNP18510 177 aa14.1□□□□□ -0.15
HDAC4-204ENST00000446876 GCAP28676 217 aa14.1□□□□□ -0.15
HDAC4-204ENST00000446876 EMP3P54852 163 aa14.1□□□□□ -0.15
HDAC4-204ENST00000446876 MAT1AQ00266 395 aaKnown RBP14.1□□□□□ -0.15
HDAC4-204ENST00000446876 GARNL3Q5VVW2 1013 aa14.1□□□□□ -0.15
HDAC4-204ENST00000446876 SULT1C3Q6IMI6 304 aa14.1□□□□□ -0.15
HDAC4-204ENST00000446876 PRMT9Q6P2P2 845 aa14.1□□□□□ -0.15
HDAC4-204ENST00000446876 NXPE4Q6UWF7 544 aa14.1□□□□□ -0.15
HDAC4-204ENST00000446876 TRMT10CQ7L0Y3 403 aaKnown RBP14.1□□□□□ -0.15
HDAC4-204ENST00000446876 PPP1R32Q7Z5V6 425 aa14.1□□□□□ -0.15
HDAC4-204ENST00000446876 MRGPREQ86SM8 312 aa14.1□□□□□ -0.15
HDAC4-204ENST00000446876 RAB43Q86YS6 212 aa14.1□□□□□ -0.15
HDAC4-204ENST00000446876 KLHDC8AQ8IYD2 350 aa14.1□□□□□ -0.15
HDAC4-204ENST00000446876 PLD6Q8N2A8 252 aaKnown RBP14.1□□□□□ -0.15
HDAC4-204ENST00000446876 AMER3Q8N944 861 aa14.1□□□□□ -0.15
HDAC4-204ENST00000446876 SNX31Q8N9S9 440 aa14.1□□□□□ -0.15
HDAC4-204ENST00000446876 PDPRQ8NCN5 879 aa14.1□□□□□ -0.15
HDAC4-204ENST00000446876 OR9A4Q8NGU2 314 aa14.1□□□□□ -0.15
HDAC4-204ENST00000446876 STAG3L4Q8TBR4 150 aa14.1□□□□□ -0.15
HDAC4-204ENST00000446876 SLC13A3Q8WWT9 602 aa14.1□□□□□ -0.15
HDAC4-204ENST00000446876 THAP4Q8WY91 577 aa14.1□□□□□ -0.15
HDAC4-204ENST00000446876 TM4SF19Q96DZ7 209 aa14.1□□□□□ -0.15
HDAC4-204ENST00000446876 THAP11Q96EK4 314 aa14.1□□□□□ -0.15
HDAC4-204ENST00000446876 MESP1Q9BRJ9 268 aa14.1□□□□□ -0.15
HDAC4-204ENST00000446876 YIPF2Q9BWQ6 316 aa14.1□□□□□ -0.15
HDAC4-204ENST00000446876 DRC3Q9H069 523 aa14.1□□□□□ -0.15
HDAC4-204ENST00000446876 EPB41L4BQ9H329 900 aa14.1□□□□□ -0.15
HDAC4-204ENST00000446876 PELI2Q9HAT8 420 aa14.1□□□□□ -0.15
HDAC4-204ENST00000446876 ZNF358Q9NW07 568 aa14.1□□□□□ -0.15
HDAC4-204ENST00000446876 GEMIN8Q9NWZ8 242 aaKnown RBP14.1□□□□□ -0.15
HDAC4-204ENST00000446876 NUDT4Q9NZJ9 180 aa14.1□□□□□ -0.15
HDAC4-204ENST00000446876 KCNE2Q9Y6J6 123 aa14.1□□□□□ -0.15
HDAC4-204ENST00000446876 IKBKGQ9Y6K9 419 aa14.1□□□□□ -0.15
HDAC4-204ENST00000446876 BSNQ9UPA5 3926 aa14.1□□□□□ -0.15
HDAC4-204ENST00000446876 TRIM49D1C9J1S8 452 aa14.09□□□□□ -0.15
HDAC4-204ENST00000446876 K7EM74 188 aa14.09□□□□□ -0.15
HDAC4-204ENST00000446876 TXNDC9O14530 226 aa14.09□□□□□ -0.15
HDAC4-204ENST00000446876 NDUFS4O43181 175 aa14.09□□□□□ -0.15
HDAC4-204ENST00000446876 ZNF500O60304 480 aaPredicted RBP14.09□□□□□ -0.15
HDAC4-204ENST00000446876 CCNT2O60583 730 aaKnown RBP14.09□□□□□ -0.15
HDAC4-204ENST00000446876 PRAMEF4O60810 478 aa14.09□□□□□ -0.15
HDAC4-204ENST00000446876 RFPL1O75677 317 aa14.09□□□□□ -0.15
HDAC4-204ENST00000446876 NR1D1P20393 614 aa14.09□□□□□ -0.15
HDAC4-204ENST00000446876 MAGEA12P43365 314 aa14.09□□□□□ -0.15
HDAC4-204ENST00000446876 SCTRP47872 440 aa14.09□□□□□ -0.15
HDAC4-204ENST00000446876 AGTR2P50052 363 aa14.09□□□□□ -0.15
HDAC4-204ENST00000446876 SERPINB9P50453 376 aa14.09□□□□□ -0.15
HDAC4-204ENST00000446876 NFATC3Q12968 1075 aa14.09□□□□□ -0.15
HDAC4-204ENST00000446876 CDC16Q13042 620 aa14.09□□□□□ -0.15
HDAC4-204ENST00000446876 DSG2Q14126 1118 aa14.09□□□□□ -0.15
HDAC4-204ENST00000446876 SSPNQ14714 243 aa14.09□□□□□ -0.15
HDAC4-204ENST00000446876 VWA2Q5GFL6 755 aa14.09□□□□□ -0.15
HDAC4-204ENST00000446876 PRAMEF9Q5VWM5 478 aa14.09□□□□□ -0.15
HDAC4-204ENST00000446876 TMEM214Q6NUQ4 689 aaKnown RBP14.09□□□□□ -0.15
HDAC4-204ENST00000446876 SLCO4C1Q6ZQN7 724 aa14.09□□□□□ -0.15
HDAC4-204ENST00000446876 TCAIMQ8N3R3 496 aa14.09□□□□□ -0.15
HDAC4-204ENST00000446876 ANKRD53Q8N9V6 530 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms