RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 FAM120CQ9NX05 1096 aaKnown RBP16.79■□□□□ 0.28
SMC6-206ENST00000446852 PDP2Q9P2J9 529 aa16.79■□□□□ 0.28
SMC6-206ENST00000446852 TAC3Q9UHF0 121 aa16.79■□□□□ 0.28
SMC6-206ENST00000446852 TNRC18O15417 2968 aaPredicted RBP16.79■□□□□ 0.28
SMC6-206ENST00000446852 GMNNO75496 209 aa16.78■□□□□ 0.28
SMC6-206ENST00000446852 DMPKQ09013 629 aa16.78■□□□□ 0.28
SMC6-206ENST00000446852 NHSL2Q5HYW2 709 aa16.78■□□□□ 0.28
SMC6-206ENST00000446852 SPRED1Q7Z699 444 aa16.78■□□□□ 0.28
SMC6-206ENST00000446852 PACRGLQ8N7B6 248 aa16.78■□□□□ 0.28
SMC6-206ENST00000446852 SMRP1Q8NCR6 262 aa16.78■□□□□ 0.28
SMC6-206ENST00000446852 MYOCQ99972 504 aa16.78■□□□□ 0.28
SMC6-206ENST00000446852 DUSP26Q9BV47 211 aa16.78■□□□□ 0.28
SMC6-206ENST00000446852 OSGEPL1Q9H4B0 414 aa16.78■□□□□ 0.28
SMC6-206ENST00000446852 PLEKHM1Q9Y4G2 1056 aa16.78■□□□□ 0.28
SMC6-206ENST00000446852 DNAH14Q0VDD8 3507 aa16.78■□□□□ 0.28
SMC6-206ENST00000446852 SNRNP200O75643 2136 aaKnown RBP16.78■□□□□ 0.28
SMC6-206ENST00000446852 LDLRP01130 860 aa16.78■□□□□ 0.28
SMC6-206ENST00000446852 RPN2P04844 631 aa16.78■□□□□ 0.28
SMC6-206ENST00000446852 RAP2AP10114 183 aa16.78■□□□□ 0.28
SMC6-206ENST00000446852 PSMB5P28074 263 aa16.78■□□□□ 0.28
SMC6-206ENST00000446852 PPP2CBP62714 309 aa16.78■□□□□ 0.28
SMC6-206ENST00000446852 PPP2CAP67775 309 aa16.78■□□□□ 0.28
SMC6-206ENST00000446852 MYBPC1Q00872 1141 aa16.78■□□□□ 0.28
SMC6-206ENST00000446852 LAPTM5Q13571 262 aa16.78■□□□□ 0.28
SMC6-206ENST00000446852 ARHGAP19Q14CB8 494 aa16.78■□□□□ 0.28
SMC6-206ENST00000446852 MLF2Q15773 248 aaPredicted RBP16.78■□□□□ 0.28
SMC6-206ENST00000446852 CYP2A13Q16696 494 aa16.78■□□□□ 0.28
SMC6-206ENST00000446852 WDR48Q8TAF3 677 aa16.78■□□□□ 0.28
SMC6-206ENST00000446852 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.78■□□□□ 0.28
SMC6-206ENST00000446852 HAUS8Q9BT25 410 aa16.78■□□□□ 0.28
SMC6-206ENST00000446852 C9orf16Q9BUW7 83 aa16.78■□□□□ 0.28
SMC6-206ENST00000446852 TRIT1Q9H3H1 467 aaKnown RBP16.78■□□□□ 0.28
SMC6-206ENST00000446852 SIRT5Q9NXA8 310 aa16.78■□□□□ 0.28
SMC6-206ENST00000446852 LIMD1Q9UGP4 676 aa16.78■□□□□ 0.28
SMC6-206ENST00000446852 ACSL5Q9ULC5 683 aa16.78■□□□□ 0.28
SMC6-206ENST00000446852 KCNK6Q9Y257 313 aa16.78■□□□□ 0.28
SMC6-206ENST00000446852 TBC1D3DA0A087WVF3 549 aa16.77■□□□□ 0.28
SMC6-206ENST00000446852 TBC1D3IA0A087WXS9 549 aa16.77■□□□□ 0.28
SMC6-206ENST00000446852 TBC1D3EA0A087X179 549 aa16.77■□□□□ 0.28
SMC6-206ENST00000446852 TBC1D3KA0A087X1G2 549 aa16.77■□□□□ 0.28
SMC6-206ENST00000446852 TBC1D3FA6NER0 549 aaPredicted RBP16.77■□□□□ 0.28
SMC6-206ENST00000446852 TBC1D3LB9A6J9 549 aa16.77■□□□□ 0.28
SMC6-206ENST00000446852 MAP3K13O43283 966 aa16.77■□□□□ 0.28
SMC6-206ENST00000446852 KLHL18O94889 574 aa16.77■□□□□ 0.28
SMC6-206ENST00000446852 SCELO95171 688 aa16.77■□□□□ 0.28
SMC6-206ENST00000446852 TBC1D3HP0C7X1 549 aa16.77■□□□□ 0.28
SMC6-206ENST00000446852 IDSP22304 550 aa16.77■□□□□ 0.28
SMC6-206ENST00000446852 ABHD18Q0P651 414 aa16.77■□□□□ 0.28
SMC6-206ENST00000446852 IER5LQ5T953 404 aa16.77■□□□□ 0.28
SMC6-206ENST00000446852 TBC1D3GQ6DHY5 549 aa16.77■□□□□ 0.28
SMC6-206ENST00000446852 TBC1D3CQ6IPX1 549 aa16.77■□□□□ 0.28
SMC6-206ENST00000446852 TMIGD1Q6UXZ0 262 aa16.77■□□□□ 0.28
SMC6-206ENST00000446852 CAMKMTQ7Z624 323 aa16.77■□□□□ 0.28
SMC6-206ENST00000446852 HORMAD1Q86X24 394 aa16.77■□□□□ 0.28
SMC6-206ENST00000446852 TBC1D3Q8IZP1 549 aaPredicted RBP16.77■□□□□ 0.28
SMC6-206ENST00000446852 STARD8Q92502 1023 aa16.77■□□□□ 0.28
SMC6-206ENST00000446852 FAM162AQ96A26 154 aa16.77■□□□□ 0.28
SMC6-206ENST00000446852 REXO5Q96IC2 774 aaKnown RBP16.77■□□□□ 0.28
SMC6-206ENST00000446852 INSM2Q96T92 566 aaPredicted RBP16.77■□□□□ 0.28
SMC6-206ENST00000446852 NTN4Q9HB63 628 aa16.77■□□□□ 0.28
SMC6-206ENST00000446852 CD93Q9NPY3 652 aa16.77■□□□□ 0.28
SMC6-206ENST00000446852 CUEDC1Q9NWM3 386 aaPredicted RBP16.77■□□□□ 0.28
SMC6-206ENST00000446852 SLC17A4Q9Y2C5 497 aa16.77■□□□□ 0.28
SMC6-206ENST00000446852 PIAS3Q9Y6X2 628 aa16.77■□□□□ 0.28
SMC6-206ENST00000446852 A0A1W2PPV9 198 aa16.77■□□□□ 0.27
SMC6-206ENST00000446852 CREG1O75629 220 aa16.77■□□□□ 0.27
SMC6-206ENST00000446852 CPSF4O95639 269 aaKnown RBP16.77■□□□□ 0.27
SMC6-206ENST00000446852 PIK3CBP42338 1070 aa16.77■□□□□ 0.27
SMC6-206ENST00000446852 TXNL4AP83876 142 aaKnown RBP16.77■□□□□ 0.27
SMC6-206ENST00000446852 ZNF763Q0D2J5 394 aa16.77■□□□□ 0.27
SMC6-206ENST00000446852 FAM98BQ52LJ0 330 aaKnown RBP16.77■□□□□ 0.27
SMC6-206ENST00000446852 TMTC4Q5T4D3 741 aa16.77■□□□□ 0.27
SMC6-206ENST00000446852 CPTPQ5TA50 214 aa16.77■□□□□ 0.27
SMC6-206ENST00000446852 RNF220Q5VTB9 566 aa16.77■□□□□ 0.27
SMC6-206ENST00000446852 GPR155Q7Z3F1 870 aa16.77■□□□□ 0.27
SMC6-206ENST00000446852 CARM1Q86X55 608 aa16.77■□□□□ 0.27
SMC6-206ENST00000446852 MFSD2AQ8NA29 543 aa16.77■□□□□ 0.27
SMC6-206ENST00000446852 LINC01555Q8NAE3 123 aa16.77■□□□□ 0.27
SMC6-206ENST00000446852 OR52E4Q8NGH9 312 aa16.77■□□□□ 0.27
SMC6-206ENST00000446852 NETO1Q8TDF5 533 aa16.77■□□□□ 0.27
SMC6-206ENST00000446852 NCLNQ969V3 563 aa16.77■□□□□ 0.27
SMC6-206ENST00000446852 BTBD1Q9H0C5 482 aa16.77■□□□□ 0.27
SMC6-206ENST00000446852 ZNF576Q9H609 170 aa16.77■□□□□ 0.27
SMC6-206ENST00000446852 UTS2RQ9UKP6 389 aa16.77■□□□□ 0.27
SMC6-206ENST00000446852 CLIC1O00299 241 aa16.76■□□□□ 0.27
SMC6-206ENST00000446852 SLC31A1O15431 190 aa16.76■□□□□ 0.27
SMC6-206ENST00000446852 RASAL1O95294 804 aa16.76■□□□□ 0.27
SMC6-206ENST00000446852 ENGP17813 658 aa16.76■□□□□ 0.27
SMC6-206ENST00000446852 HPCAL1P37235 193 aa16.76■□□□□ 0.27
SMC6-206ENST00000446852 CHRNB3Q05901 458 aa16.76■□□□□ 0.27
SMC6-206ENST00000446852 ZNF385BQ569K4 471 aa16.76■□□□□ 0.27
SMC6-206ENST00000446852 ZNF621Q6ZSS3 439 aa16.76■□□□□ 0.27
SMC6-206ENST00000446852 FAM124AQ86V42 546 aa16.76■□□□□ 0.27
SMC6-206ENST00000446852 C17orf64Q86WR6 236 aa16.76■□□□□ 0.27
SMC6-206ENST00000446852 VPS50Q96JG6 964 aa16.76■□□□□ 0.27
SMC6-206ENST00000446852 C12orf66Q96MD2 445 aa16.76■□□□□ 0.27
SMC6-206ENST00000446852 TIMM29Q9BSF4 260 aa16.76■□□□□ 0.27
SMC6-206ENST00000446852 DCAF13Q9NV06 445 aaKnown RBP16.76■□□□□ 0.27
SMC6-206ENST00000446852 ZNF639Q9UID6 485 aa16.76■□□□□ 0.27
SMC6-206ENST00000446852 TSC22D4Q9Y3Q8 395 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms