RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 L3MBTL4Q8NA19 623 aa4.14□□□□□ -1.75
HMGB1P48-201ENST00000446155 SLC24A4Q8NFF2 622 aa4.14□□□□□ -1.75
HMGB1P48-201ENST00000446155 TMEM255BQ8WV15 326 aa4.14□□□□□ -1.75
HMGB1P48-201ENST00000446155 SECTM1Q8WVN6 248 aa4.14□□□□□ -1.75
HMGB1P48-201ENST00000446155 FAM46BQ96A09 425 aa4.14□□□□□ -1.75
HMGB1P48-201ENST00000446155 PKNOX2Q96KN3 472 aa4.14□□□□□ -1.75
HMGB1P48-201ENST00000446155 DDX50Q9BQ39 737 aaKnown RBP4.14□□□□□ -1.75
HMGB1P48-201ENST00000446155 BTBD10Q9BSF8 475 aa4.14□□□□□ -1.75
HMGB1P48-201ENST00000446155 THUMPD2Q9BTF0 503 aaKnown RBP4.14□□□□□ -1.75
HMGB1P48-201ENST00000446155 ANP32EQ9BTT0 268 aa4.14□□□□□ -1.75
HMGB1P48-201ENST00000446155 SLC2A11Q9BYW1 496 aa4.14□□□□□ -1.75
HMGB1P48-201ENST00000446155 ACPTQ9BZG2 426 aa4.14□□□□□ -1.75
HMGB1P48-201ENST00000446155 CCSER1Q9C0I3 900 aa4.14□□□□□ -1.75
HMGB1P48-201ENST00000446155 RAB17Q9H0T7 212 aa4.14□□□□□ -1.75
HMGB1P48-201ENST00000446155 NAPBQ9H115 298 aa4.14□□□□□ -1.75
HMGB1P48-201ENST00000446155 RPF1Q9H9Y2 349 aaKnown RBP4.14□□□□□ -1.75
HMGB1P48-201ENST00000446155 RAB9BQ9NP90 201 aa4.14□□□□□ -1.75
HMGB1P48-201ENST00000446155 KCNMB3Q9NPA1 279 aa4.14□□□□□ -1.75
HMGB1P48-201ENST00000446155 FAM212BQ9NTI7 297 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P48-201ENST00000446155 LAMP5Q9UJQ1 280 aa4.14□□□□□ -1.75
HMGB1P48-201ENST00000446155 FOXA2Q9Y261 457 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P48-201ENST00000446155 KIF21AQ7Z4S6 1674 aa4.13□□□□□ -1.75
HMGB1P48-201ENST00000446155 HYKKA2RU49 373 aa4.13□□□□□ -1.75
HMGB1P48-201ENST00000446155 GPR89AB7ZAQ6 455 aa4.13□□□□□ -1.75
HMGB1P48-201ENST00000446155 F8WDY8 70 aa4.13□□□□□ -1.75
HMGB1P48-201ENST00000446155 H0YCG3 227 aa4.13□□□□□ -1.75
HMGB1P48-201ENST00000446155 O00370 1275 aa4.13□□□□□ -1.75
HMGB1P48-201ENST00000446155 IKBKBO14920 756 aa4.13□□□□□ -1.75
HMGB1P48-201ENST00000446155 MAGEB2O15479 319 aa4.13□□□□□ -1.75
HMGB1P48-201ENST00000446155 WDR1O75083 606 aa4.13□□□□□ -1.75
HMGB1P48-201ENST00000446155 ATP6AP2O75787 350 aa4.13□□□□□ -1.75
HMGB1P48-201ENST00000446155 KRT36O76013 467 aa4.13□□□□□ -1.75
HMGB1P48-201ENST00000446155 CXCL10P02778 98 aa4.13□□□□□ -1.75
HMGB1P48-201ENST00000446155 PGK2P07205 417 aa4.13□□□□□ -1.75
HMGB1P48-201ENST00000446155 F7P08709 466 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P48-201ENST00000446155 GPR89BP0CG08 455 aa4.13□□□□□ -1.75
HMGB1P48-201ENST00000446155 SMIM18P0DKX4 95 aa4.13□□□□□ -1.75
HMGB1P48-201ENST00000446155 HAPLN1P10915 354 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P48-201ENST00000446155 KRT5P13647 590 aa4.13□□□□□ -1.75
HMGB1P48-201ENST00000446155 PRG2P13727 222 aa4.13□□□□□ -1.75
HMGB1P48-201ENST00000446155 HOXB6P17509 224 aaKnown RBP4.13□□□□□ -1.75
HMGB1P48-201ENST00000446155 HNRNPFP52597 415 aaKnown RBP4.13□□□□□ -1.75
HMGB1P48-201ENST00000446155 EEF1A1P68104 462 aaKnown RBP4.13□□□□□ -1.75
HMGB1P48-201ENST00000446155 PITX1P78337 314 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P48-201ENST00000446155 RPL36AP83881 106 aaKnown RBP4.13□□□□□ -1.75
HMGB1P48-201ENST00000446155 MAT1AQ00266 395 aaKnown RBP4.13□□□□□ -1.75
HMGB1P48-201ENST00000446155 PMP22Q01453 160 aa4.13□□□□□ -1.75
HMGB1P48-201ENST00000446155 PPP1R8Q12972 351 aaKnown RBP4.13□□□□□ -1.75
HMGB1P48-201ENST00000446155 SGCGQ13326 291 aa4.13□□□□□ -1.75
HMGB1P48-201ENST00000446155 VEZF1Q14119 521 aa4.13□□□□□ -1.75
HMGB1P48-201ENST00000446155 ZRSR1Q15695 479 aaKnown RBP4.13□□□□□ -1.75
HMGB1P48-201ENST00000446155 ZNF672Q499Z4 452 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P48-201ENST00000446155 MCMDC2Q4G0Z9 681 aa4.13□□□□□ -1.75
HMGB1P48-201ENST00000446155 TMEM35AQ53FP2 167 aa4.13□□□□□ -1.75
HMGB1P48-201ENST00000446155 SYT14P1Q58G82 188 aa4.13□□□□□ -1.75
HMGB1P48-201ENST00000446155 STXBP5Q5T5C0 1151 aa4.13□□□□□ -1.75
HMGB1P48-201ENST00000446155 GRTP1Q5TC63 336 aa4.13□□□□□ -1.75
HMGB1P48-201ENST00000446155 EEF1A1P5Q5VTE0 462 aa4.13□□□□□ -1.75
HMGB1P48-201ENST00000446155 IRGCQ6NXR0 463 aa4.13□□□□□ -1.75
HMGB1P48-201ENST00000446155 ARMCX2Q7L311 632 aa4.13□□□□□ -1.75
HMGB1P48-201ENST00000446155 AMIGO1Q86WK6 493 aa4.13□□□□□ -1.75
HMGB1P48-201ENST00000446155 TMEM126BQ8IUX1 230 aa4.13□□□□□ -1.75
HMGB1P48-201ENST00000446155 KBTBD3Q8NAB2 608 aa4.13□□□□□ -1.75
HMGB1P48-201ENST00000446155 POC1AQ8NBT0 407 aa4.13□□□□□ -1.75
HMGB1P48-201ENST00000446155 OR52I2Q8NH67 350 aa4.13□□□□□ -1.75
HMGB1P48-201ENST00000446155 P2RX5Q93086 422 aa4.13□□□□□ -1.75
HMGB1P48-201ENST00000446155 RASL10BQ96S79 203 aa4.13□□□□□ -1.75
HMGB1P48-201ENST00000446155 NEURL2Q9BR09 285 aa4.13□□□□□ -1.75
HMGB1P48-201ENST00000446155 TMEM245Q9H330 911 aa4.13□□□□□ -1.75
HMGB1P48-201ENST00000446155 CUEDC2Q9H467 287 aa4.13□□□□□ -1.75
HMGB1P48-201ENST00000446155 RIBC2Q9H4K1 309 aa4.13□□□□□ -1.75
HMGB1P48-201ENST00000446155 ZCCHC3Q9NUD5 404 aaKnown RBP4.13□□□□□ -1.75
HMGB1P48-201ENST00000446155 ANGPTL3Q9Y5C1 460 aa4.13□□□□□ -1.75
HMGB1P48-201ENST00000446155 U3KQV3 271 aa4.13□□□□□ -1.75
HMGB1P48-201ENST00000446155 UBE4BO95155 1302 aa4.13□□□□□ -1.75
HMGB1P48-201ENST00000446155 TRAV24A0A0B4J272 114 aa4.12□□□□□ -1.75
HMGB1P48-201ENST00000446155 MACROD2A1Z1Q3 448 aa4.12□□□□□ -1.75
HMGB1P48-201ENST00000446155 PRSS44E7EML9 344 aa4.12□□□□□ -1.75
HMGB1P48-201ENST00000446155 TMEM178BH3BS89 294 aa4.12□□□□□ -1.75
HMGB1P48-201ENST00000446155 TEX28O15482 410 aa4.12□□□□□ -1.75
HMGB1P48-201ENST00000446155 MOCS2O96007 188 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P48-201ENST00000446155 LDLRP01130 860 aa4.12□□□□□ -1.75
HMGB1P48-201ENST00000446155 PDHBP11177 359 aa4.12□□□□□ -1.75
HMGB1P48-201ENST00000446155 PBLDP30039 288 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P48-201ENST00000446155 RPL21P46778 160 aaKnown RBP4.12□□□□□ -1.75
HMGB1P48-201ENST00000446155 OR3A1P47881 315 aa4.12□□□□□ -1.75
HMGB1P48-201ENST00000446155 PITPNBP48739 271 aa4.12□□□□□ -1.75
HMGB1P48-201ENST00000446155 CLDN15P56746 228 aa4.12□□□□□ -1.75
HMGB1P48-201ENST00000446155 RPL24P83731 157 aaKnown RBP4.12□□□□□ -1.75
HMGB1P48-201ENST00000446155 ILF2Q12905 390 aaKnown RBP4.12□□□□□ -1.75
HMGB1P48-201ENST00000446155 ZNF718Q3SXZ3 478 aa4.12□□□□□ -1.75
HMGB1P48-201ENST00000446155 KLHL22Q53GT1 634 aa4.12□□□□□ -1.75
HMGB1P48-201ENST00000446155 HERC4Q5GLZ8 1057 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P48-201ENST00000446155 FAM76BQ5HYJ3 339 aa4.12□□□□□ -1.75
HMGB1P48-201ENST00000446155 SUSD4Q5VX71 490 aa4.12□□□□□ -1.75
HMGB1P48-201ENST00000446155 DLEU7Q6UYE1 221 aa4.12□□□□□ -1.75
HMGB1P48-201ENST00000446155 B3GLCTQ6Y288 498 aa4.12□□□□□ -1.75
HMGB1P48-201ENST00000446155 C9orf139Q6ZV77 190 aa4.12□□□□□ -1.75
HMGB1P48-201ENST00000446155 ASPGQ86U10 573 aa4.12□□□□□ -1.75
HMGB1P48-201ENST00000446155 AMZ2Q86W34 360 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms