RNA–Protein interactions for RNA: ENST00000445241.5

PTPA-222, Transcript of protein phosphatase 2 phosphatase activator, human

TSL 3

Gene PTPA, Length 949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPA-222	ENST00000445241	NT5DC2	Q9H857	520 aa		13.96	□□□□□ -0.17
PTPA-222	ENST00000445241	WDR54	Q9H977	334 aa		13.96	□□□□□ -0.17
PTPA-222	ENST00000445241	DHCR7	Q9UBM7	475 aa	Known RBP	13.96	□□□□□ -0.17
PTPA-222	ENST00000445241	FARSA	Q9Y285	508 aa	Known RBP	13.96	□□□□□ -0.17
PTPA-222	ENST00000445241	CCDC88C	Q9P219	2028 aa		13.95	□□□□□ -0.18
PTPA-222	ENST00000445241		K7EPI3	171 aa		13.95	□□□□□ -0.18
PTPA-222	ENST00000445241	UBXN8	O00124	270 aa		13.95	□□□□□ -0.18
PTPA-222	ENST00000445241	CLGN	O14967	610 aa		13.95	□□□□□ -0.18
PTPA-222	ENST00000445241	CREG1	O75629	220 aa		13.95	□□□□□ -0.18
PTPA-222	ENST00000445241	CAPN1	P07384	714 aa		13.95	□□□□□ -0.18
PTPA-222	ENST00000445241	CTSB	P07858	339 aa		13.95	□□□□□ -0.18
PTPA-222	ENST00000445241	SLC35G6	P0C7Q6	338 aa		13.95	□□□□□ -0.18
PTPA-222	ENST00000445241	C1GALT1C1L	P0DN25	315 aa		13.95	□□□□□ -0.18
PTPA-222	ENST00000445241	HPD	P32754	393 aa	Predicted RBP	13.95	□□□□□ -0.18
PTPA-222	ENST00000445241	BCL6	P41182	706 aa		13.95	□□□□□ -0.18
PTPA-222	ENST00000445241	CASP2	P42575	452 aa		13.95	□□□□□ -0.18
PTPA-222	ENST00000445241	GLRB	P48167	497 aa		13.95	□□□□□ -0.18
PTPA-222	ENST00000445241	HSPA7	P48741	367 aa		13.95	□□□□□ -0.18
PTPA-222	ENST00000445241	LAPTM5	Q13571	262 aa		13.95	□□□□□ -0.18
PTPA-222	ENST00000445241	NAA30	Q147X3	362 aa	Predicted RBP	13.95	□□□□□ -0.18
PTPA-222	ENST00000445241	PCBP2	Q15366	365 aa	Known RBP eCLIP	13.95	□□□□□ -0.18
PTPA-222	ENST00000445241	ARHGAP40	Q5TG30	622 aa		13.95	□□□□□ -0.18
PTPA-222	ENST00000445241	C19orf48	Q6RUI8	117 aa		13.95	□□□□□ -0.18
PTPA-222	ENST00000445241	TTLL10	Q6ZVT0	673 aa		13.95	□□□□□ -0.18
PTPA-222	ENST00000445241	VN1R4	Q7Z5H5	301 aa		13.95	□□□□□ -0.18
PTPA-222	ENST00000445241	TMPRSS11B	Q86T26	416 aa		13.95	□□□□□ -0.18
PTPA-222	ENST00000445241	KRT78	Q8N1N4	520 aa		13.95	□□□□□ -0.18
PTPA-222	ENST00000445241	TRPV3	Q8NET8	790 aa		13.95	□□□□□ -0.18
PTPA-222	ENST00000445241	PTCD3	Q96EY7	689 aa	Known RBP	13.95	□□□□□ -0.18
PTPA-222	ENST00000445241	WBP1	Q96G27	269 aa		13.95	□□□□□ -0.18
PTPA-222	ENST00000445241	C10orf90	Q96M02	699 aa		13.95	□□□□□ -0.18
PTPA-222	ENST00000445241	EFCAB11	Q9BUY7	163 aa		13.95	□□□□□ -0.18
PTPA-222	ENST00000445241	ROPN1B	Q9BZX4	212 aa	Predicted RBP	13.95	□□□□□ -0.18
PTPA-222	ENST00000445241	MRPL46	Q9H2W6	279 aa	Known RBP	13.95	□□□□□ -0.18
PTPA-222	ENST00000445241	ACTL8	Q9H568	366 aa		13.95	□□□□□ -0.18
PTPA-222	ENST00000445241	ROPN1	Q9HAT0	212 aa	Predicted RBP	13.95	□□□□□ -0.18
PTPA-222	ENST00000445241	OPTC	Q9UBM4	332 aa		13.95	□□□□□ -0.18
PTPA-222	ENST00000445241	IL17B	Q9UHF5	180 aa		13.95	□□□□□ -0.18
PTPA-222	ENST00000445241	GPN3	Q9UHW5	284 aa	Predicted RBP	13.95	□□□□□ -0.18
PTPA-222	ENST00000445241	ZFP69B	Q9UJL9	534 aa		13.95	□□□□□ -0.18
PTPA-222	ENST00000445241	NXT1	Q9UKK6	140 aa	Known RBP	13.95	□□□□□ -0.18
PTPA-222	ENST00000445241	LHX6	Q9UPM6	363 aa		13.95	□□□□□ -0.18
PTPA-222	ENST00000445241	RUVBL1	Q9Y265	456 aa	Known RBP	13.95	□□□□□ -0.18
PTPA-222	ENST00000445241	CFAP47	Q6ZTR5	3102 aa		13.95	□□□□□ -0.18
PTPA-222	ENST00000445241	URAD	A6NGE7	173 aa		13.94	□□□□□ -0.18
PTPA-222	ENST00000445241	STX16-NPEPL1	H3BU86	382 aa		13.94	□□□□□ -0.18
PTPA-222	ENST00000445241	STX16	O14662	325 aa		13.94	□□□□□ -0.18
PTPA-222	ENST00000445241	UGDH	O60701	494 aa		13.94	□□□□□ -0.18
PTPA-222	ENST00000445241	KATNA1	O75449	491 aa		13.94	□□□□□ -0.18
PTPA-222	ENST00000445241	SHBG	P04278	402 aa		13.94	□□□□□ -0.18
PTPA-222	ENST00000445241	EIF2S1	P05198	315 aa	Known RBP	13.94	□□□□□ -0.18
PTPA-222	ENST00000445241	GFAP	P14136	432 aa		13.94	□□□□□ -0.18
PTPA-222	ENST00000445241	WT1	P19544	449 aa	Predicted RBP	13.94	□□□□□ -0.18
PTPA-222	ENST00000445241	ALAS2	P22557	587 aa		13.94	□□□□□ -0.18
PTPA-222	ENST00000445241	F8A1	P23610	371 aa		13.94	□□□□□ -0.18
PTPA-222	ENST00000445241	GMPR	P36959	345 aa		13.94	□□□□□ -0.18
PTPA-222	ENST00000445241	GDF5	P43026	501 aa		13.94	□□□□□ -0.18
PTPA-222	ENST00000445241	SCTR	P47872	440 aa		13.94	□□□□□ -0.18
PTPA-222	ENST00000445241	SKP1	P63208	163 aa		13.94	□□□□□ -0.18
PTPA-222	ENST00000445241	SRSF6	Q13247	344 aa	Known RBP	13.94	□□□□□ -0.18
PTPA-222	ENST00000445241	ITPR1	Q14643	2758 aa		13.94	□□□□□ -0.18
PTPA-222	ENST00000445241	UGT8	Q16880	541 aa		13.94	□□□□□ -0.18
PTPA-222	ENST00000445241	PAGE2B	Q5JRK9	111 aa		13.94	□□□□□ -0.18
PTPA-222	ENST00000445241	CATSPERE	Q5SY80	951 aa		13.94	□□□□□ -0.18
PTPA-222	ENST00000445241	MRPL14	Q6P1L8	145 aa	Known RBP	13.94	□□□□□ -0.18
PTPA-222	ENST00000445241	FAM199X	Q6PEV8	388 aa	Predicted RBP	13.94	□□□□□ -0.18
PTPA-222	ENST00000445241	ASPG	Q86U10	573 aa		13.94	□□□□□ -0.18
PTPA-222	ENST00000445241	PLD6	Q8N2A8	252 aa	Known RBP	13.94	□□□□□ -0.18
PTPA-222	ENST00000445241	LSM14A	Q8ND56	463 aa	Known RBP	13.94	□□□□□ -0.18
PTPA-222	ENST00000445241	SLC13A3	Q8WWT9	602 aa		13.94	□□□□□ -0.18
PTPA-222	ENST00000445241	EXT2	Q93063	718 aa		13.94	□□□□□ -0.18
PTPA-222	ENST00000445241	IP6K3	Q96PC2	410 aa		13.94	□□□□□ -0.18
PTPA-222	ENST00000445241	DRC3	Q9H069	523 aa		13.94	□□□□□ -0.18
PTPA-222	ENST00000445241	AKIRIN1	Q9H9L7	192 aa	Predicted RBP	13.94	□□□□□ -0.18
PTPA-222	ENST00000445241	WDR70	Q9NW82	654 aa		13.94	□□□□□ -0.18
PTPA-222	ENST00000445241	IFT80	Q9P2H3	777 aa	Predicted RBP	13.94	□□□□□ -0.18
PTPA-222	ENST00000445241	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	13.94	□□□□□ -0.18
PTPA-222	ENST00000445241	NDOR1	Q9UHB4	597 aa		13.94	□□□□□ -0.18
PTPA-222	ENST00000445241	DCDC2	Q9UHG0	476 aa		13.94	□□□□□ -0.18
PTPA-222	ENST00000445241	TCFL5	Q9UL49	500 aa		13.94	□□□□□ -0.18
PTPA-222	ENST00000445241	SLC22A7	Q9Y694	548 aa		13.94	□□□□□ -0.18
PTPA-222	ENST00000445241		V9GYY5	206 aa	Predicted RBP	13.94	□□□□□ -0.18
PTPA-222	ENST00000445241	FEZF1	A0PJY2	475 aa		13.93	□□□□□ -0.18
PTPA-222	ENST00000445241	ERVH48-1	M5A8F1	160 aa		13.93	□□□□□ -0.18
PTPA-222	ENST00000445241	OR1F1	O43749	312 aa		13.93	□□□□□ -0.18
PTPA-222	ENST00000445241	LCMT2	O60294	686 aa	Known RBP	13.93	□□□□□ -0.18
PTPA-222	ENST00000445241	CCNT2	O60583	730 aa	Known RBP	13.93	□□□□□ -0.18
PTPA-222	ENST00000445241	SMIM24	O75264	130 aa		13.93	□□□□□ -0.18
PTPA-222	ENST00000445241	EPB42	P16452	691 aa		13.93	□□□□□ -0.18
PTPA-222	ENST00000445241	SERPINB1	P30740	379 aa		13.93	□□□□□ -0.18
PTPA-222	ENST00000445241	NFKB2	Q00653	900 aa		13.93	□□□□□ -0.18
PTPA-222	ENST00000445241	RGS1	Q08116	209 aa		13.93	□□□□□ -0.18
PTPA-222	ENST00000445241	CDC20	Q12834	499 aa		13.93	□□□□□ -0.18
PTPA-222	ENST00000445241	DSG2	Q14126	1118 aa		13.93	□□□□□ -0.18
PTPA-222	ENST00000445241	HERC3	Q15034	1050 aa		13.93	□□□□□ -0.18
PTPA-222	ENST00000445241	PFKFB4	Q16877	469 aa		13.93	□□□□□ -0.18
PTPA-222	ENST00000445241	HKDC1	Q2TB90	917 aa		13.93	□□□□□ -0.18
PTPA-222	ENST00000445241	C18orf21	Q32NC0	220 aa	Predicted RBP	13.93	□□□□□ -0.18
PTPA-222	ENST00000445241	LCN10	Q6JVE6	187 aa		13.93	□□□□□ -0.18
PTPA-222	ENST00000445241	TMEM214	Q6NUQ4	689 aa	Known RBP	13.93	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms