RNA–Protein interactions for RNA: ENST00000443908.5

SF1-210, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-210ENST00000443908 CSTF3Q12996 717 aaKnown RBP12.91□□□□□ -0.34
SF1-210ENST00000443908 IFT88Q13099 833 aa12.91□□□□□ -0.34
SF1-210ENST00000443908 TARDBPQ13148 414 aaKnown RBP eCLIP12.91□□□□□ -0.341e-6■■□□□ 12.3
SF1-210ENST00000443908 SLBPQ14493 270 aaKnown RBP eCLIP12.91□□□□□ -0.34
SF1-210ENST00000443908 CPSF6Q16630 551 aaKnown RBP eCLIP12.91□□□□□ -0.34
SF1-210ENST00000443908 HIST2H2ACQ16777 129 aaPredicted RBP12.91□□□□□ -0.34
SF1-210ENST00000443908 SLC9B1Q4ZJI4 515 aa12.91□□□□□ -0.34
SF1-210ENST00000443908 HIST2H2AA3Q6FI13 130 aa12.91□□□□□ -0.34
SF1-210ENST00000443908 ZNF425Q6IV72 752 aa12.91□□□□□ -0.34
SF1-210ENST00000443908 MED27Q6P2C8 311 aa12.91□□□□□ -0.34
SF1-210ENST00000443908 MYLK4Q86YV6 388 aaPredicted RBP12.91□□□□□ -0.34
SF1-210ENST00000443908 KRT78Q8N1N4 520 aa12.91□□□□□ -0.34
SF1-210ENST00000443908 CEP70Q8NHQ1 597 aa12.91□□□□□ -0.34
SF1-210ENST00000443908 JPH3Q8WXH2 748 aaPredicted RBP12.91□□□□□ -0.34
SF1-210ENST00000443908 NXPE2Q96DL1 559 aa12.91□□□□□ -0.34
SF1-210ENST00000443908 OR2A14Q96R47 310 aa12.91□□□□□ -0.34
SF1-210ENST00000443908 SLC38A3Q99624 504 aa12.91□□□□□ -0.34
SF1-210ENST00000443908 ACAT2Q9BWD1 397 aa12.91□□□□□ -0.34
SF1-210ENST00000443908 TBC1D10AQ9BXI6 508 aa12.91□□□□□ -0.34
SF1-210ENST00000443908 ELOVL6Q9H5J4 265 aa12.91□□□□□ -0.34
SF1-210ENST00000443908 SLC6A20Q9NP91 592 aa12.91□□□□□ -0.34
SF1-210ENST00000443908 TCF7L2Q9NQB0 619 aa12.91□□□□□ -0.34
SF1-210ENST00000443908 ABCF3Q9NUQ8 709 aa12.91□□□□□ -0.34
SF1-210ENST00000443908 MRGBPQ9NV56 204 aa12.91□□□□□ -0.34
SF1-210ENST00000443908 TMEM184CQ9NVA4 438 aa12.91□□□□□ -0.34
SF1-210ENST00000443908 RIC8BQ9NVN3 520 aa12.91□□□□□ -0.34
SF1-210ENST00000443908 GEMIN8Q9NWZ8 242 aaKnown RBP12.91□□□□□ -0.34
SF1-210ENST00000443908 ADGRE2Q9UHX3 823 aa12.91□□□□□ -0.34
SF1-210ENST00000443908 POMT2Q9UKY4 750 aa12.91□□□□□ -0.34
SF1-210ENST00000443908 PCDHGA1Q9Y5H4 931 aa12.91□□□□□ -0.34
SF1-210ENST00000443908 RNF215Q9Y6U7 377 aa12.91□□□□□ -0.34
SF1-210ENST00000443908 ANKRD12Q6UB98 2062 aa12.91□□□□□ -0.34
SF1-210ENST00000443908 ARHGEF17Q96PE2 2063 aaPredicted RBP12.9□□□□□ -0.34
SF1-210ENST00000443908 IGKV1-8A0A0C4DH67 115 aa12.9□□□□□ -0.34
SF1-210ENST00000443908 TRBC2A0A5B9 178 aa12.9□□□□□ -0.34
SF1-210ENST00000443908 TRIM38O00635 465 aa12.9□□□□□ -0.34
SF1-210ENST00000443908 FFAR3O14843 346 aa12.9□□□□□ -0.34
SF1-210ENST00000443908 GPR42O15529 346 aa12.9□□□□□ -0.34
SF1-210ENST00000443908 UBXN7O94888 489 aa12.9□□□□□ -0.34
SF1-210ENST00000443908 ZIC2O95409 532 aaPredicted RBP12.9□□□□□ -0.34
SF1-210ENST00000443908 PRR35P0CG20 571 aa12.9□□□□□ -0.34
SF1-210ENST00000443908 UGT2B7P16662 529 aa12.9□□□□□ -0.34
SF1-210ENST00000443908 POLR2CP19387 275 aaPredicted RBP12.9□□□□□ -0.34
SF1-210ENST00000443908 PRPH2P23942 346 aa12.9□□□□□ -0.34
SF1-210ENST00000443908 VARSP26640 1264 aaKnown RBP12.9□□□□□ -0.34
SF1-210ENST00000443908 EIF2S3P41091 472 aaKnown RBP12.9□□□□□ -0.34
SF1-210ENST00000443908 CSNK1G2P78368 415 aa12.9□□□□□ -0.34
SF1-210ENST00000443908 GPLD1P80108 840 aa12.9□□□□□ -0.34
SF1-210ENST00000443908 NR0B2Q15466 257 aa12.9□□□□□ -0.34
SF1-210ENST00000443908 SF1Q15637 639 aaKnown RBP12.9□□□□□ -0.34
SF1-210ENST00000443908 SMU1Q2TAY7 513 aa12.9□□□□□ -0.34
SF1-210ENST00000443908 TCHHL1Q5QJ38 904 aaPredicted RBP12.9□□□□□ -0.34
SF1-210ENST00000443908 VWA5B1Q5TIE3 1220 aa12.9□□□□□ -0.34
SF1-210ENST00000443908 OGFOD2Q6N063 350 aa12.9□□□□□ -0.34
SF1-210ENST00000443908 ARMC6Q6NXE6 501 aa12.9□□□□□ -0.34
SF1-210ENST00000443908 SPESP1Q6UW49 350 aa12.9□□□□□ -0.34
SF1-210ENST00000443908 LARP4Q71RC2 724 aaKnown RBP eCLIP12.9□□□□□ -0.34
SF1-210ENST00000443908 DDIASQ8IXT1 998 aa12.9□□□□□ -0.34
SF1-210ENST00000443908 CARFQ8N187 725 aa12.9□□□□□ -0.34
SF1-210ENST00000443908 GBP7Q8N8V2 638 aaPredicted RBP12.9□□□□□ -0.34
SF1-210ENST00000443908 TTLQ8NG68 377 aa12.9□□□□□ -0.34
SF1-210ENST00000443908 OR7G3Q8NG95 312 aa12.9□□□□□ -0.34
SF1-210ENST00000443908 SELENOMQ8WWX9 145 aa12.9□□□□□ -0.34
SF1-210ENST00000443908 CCT6BQ92526 530 aa12.9□□□□□ -0.34
SF1-210ENST00000443908 BRF2Q9HAW0 419 aa12.9□□□□□ -0.34
SF1-210ENST00000443908 CUEDC1Q9NWM3 386 aaPredicted RBP12.9□□□□□ -0.34
SF1-210ENST00000443908 HRASLS2Q9NWW9 162 aa12.9□□□□□ -0.34
SF1-210ENST00000443908 LRIT1Q9P2V4 623 aa12.9□□□□□ -0.34
SF1-210ENST00000443908 EPHA6Q9UF33 1036 aa12.9□□□□□ -0.34
SF1-210ENST00000443908 ZNF490Q9ULM2 529 aaPredicted RBP12.9□□□□□ -0.34
SF1-210ENST00000443908 PADI4Q9UM07 663 aa12.9□□□□□ -0.34
SF1-210ENST00000443908 SNX7Q9UNH6 387 aa12.9□□□□□ -0.34
SF1-210ENST00000443908 BTRCQ9Y297 605 aa12.9□□□□□ -0.34
SF1-210ENST00000443908 A0A0J9YY10 115 aa12.89□□□□□ -0.35
SF1-210ENST00000443908 GSAPA4D1B5 854 aa12.89□□□□□ -0.35
SF1-210ENST00000443908 OR2A25A4D2G3 310 aa12.89□□□□□ -0.35
SF1-210ENST00000443908 FOXE1O00358 373 aaPredicted RBP12.89□□□□□ -0.35
SF1-210ENST00000443908 ZW10O43264 779 aa12.89□□□□□ -0.35
SF1-210ENST00000443908 RGS14O43566 566 aa12.89□□□□□ -0.35
SF1-210ENST00000443908 RSL1D1O76021 490 aaKnown RBP12.89□□□□□ -0.35
SF1-210ENST00000443908 PRB1P04280 392 aa12.89□□□□□ -0.35
SF1-210ENST00000443908 SERPINA6P08185 405 aa12.89□□□□□ -0.35
SF1-210ENST00000443908 AMD1P17707 334 aa12.89□□□□□ -0.35
SF1-210ENST00000443908 EPHA3P29320 983 aa12.89□□□□□ -0.35
SF1-210ENST00000443908 GRK3P35626 688 aa12.89□□□□□ -0.35
SF1-210ENST00000443908 PIK3CBP42338 1070 aa12.89□□□□□ -0.35
SF1-210ENST00000443908 PHEXP78562 749 aa12.89□□□□□ -0.35
SF1-210ENST00000443908 ABRAXAS2Q15018 415 aa12.89□□□□□ -0.35
SF1-210ENST00000443908 LSM12Q3MHD2 195 aaKnown RBP12.89□□□□□ -0.35
SF1-210ENST00000443908 HES3Q5TGS1 186 aa12.89□□□□□ -0.35
SF1-210ENST00000443908 KIAA1614Q5VZ46 1190 aa12.89□□□□□ -0.35
SF1-210ENST00000443908 TMIGD1Q6UXZ0 262 aa12.89□□□□□ -0.35
SF1-210ENST00000443908 PAQR7Q86WK9 346 aa12.89□□□□□ -0.35
SF1-210ENST00000443908 TBC1D19Q8N5T2 526 aa12.89□□□□□ -0.35
SF1-210ENST00000443908 OR10G6Q8NH81 332 aa12.89□□□□□ -0.35
SF1-210ENST00000443908 SLC39A7Q92504 469 aa12.89□□□□□ -0.35
SF1-210ENST00000443908 RSC1A1Q92681 617 aa12.89□□□□□ -0.35
SF1-210ENST00000443908 NAT6Q93015 286 aa12.89□□□□□ -0.35
SF1-210ENST00000443908 ZUFSPQ96AP4 578 aa12.89□□□□□ -0.35
SF1-210ENST00000443908 METTL2AQ96IZ6 378 aaKnown RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms