RNA–Protein interactions for RNA: ENST00000443660.5

MRPL40-202, Transcript of mitochondrial ribosomal protein L40, humanhuman

TSL 2

Gene MRPL40, Length 954 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-202ENST00000443660 ARHGEF39Q8N4T4 335 aa13.99□□□□□ -0.17
MRPL40-202ENST00000443660 CPSF7Q8N684 471 aaKnown RBP13.99□□□□□ -0.17
MRPL40-202ENST00000443660 POGLUT1Q8NBL1 392 aa13.99□□□□□ -0.17
MRPL40-202ENST00000443660 NRGNQ92686 78 aa13.99□□□□□ -0.17
MRPL40-202ENST00000443660 TMEM125Q96AQ2 219 aa13.99□□□□□ -0.17
MRPL40-202ENST00000443660 LPAR4Q99677 370 aa13.99□□□□□ -0.17
MRPL40-202ENST00000443660 NPAS2Q99743 824 aa13.99□□□□□ -0.17
MRPL40-202ENST00000443660 EBNA1BP2Q99848 306 aaKnown RBP13.99□□□□□ -0.17
MRPL40-202ENST00000443660 CATSPERZQ9NTU4 200 aa13.99□□□□□ -0.17
MRPL40-202ENST00000443660 RNF6Q9Y252 685 aa13.99□□□□□ -0.17
MRPL40-202ENST00000443660 CPAMD8Q8IZJ3 1885 aa13.98□□□□□ -0.17
MRPL40-202ENST00000443660 ZNF839A8K0R7 811 aa13.98□□□□□ -0.17
MRPL40-202ENST00000443660 ERI2A8K979 691 aaKnown RBP13.98□□□□□ -0.17
MRPL40-202ENST00000443660 TFECO14948 347 aaPredicted RBP13.98□□□□□ -0.17
MRPL40-202ENST00000443660 NME2P1O60361 137 aa13.98□□□□□ -0.17
MRPL40-202ENST00000443660 MAN1A2O60476 641 aa13.98□□□□□ -0.17
MRPL40-202ENST00000443660 PRMT3O60678 531 aa13.98□□□□□ -0.17
MRPL40-202ENST00000443660 NDUFS3O75489 264 aa13.98□□□□□ -0.17
MRPL40-202ENST00000443660 NSA2O95478 260 aaKnown RBP13.98□□□□□ -0.17
MRPL40-202ENST00000443660 FOSL1P15407 271 aa13.98□□□□□ -0.17
MRPL40-202ENST00000443660 NME2P22392 152 aa13.98□□□□□ -0.17
MRPL40-202ENST00000443660 PTGER1P34995 402 aa13.98□□□□□ -0.17
MRPL40-202ENST00000443660 CTNNA1P35221 906 aaKnown RBP13.98□□□□□ -0.17
MRPL40-202ENST00000443660 CYB561P49447 251 aa13.98□□□□□ -0.17
MRPL40-202ENST00000443660 RWDD2BP57060 319 aa13.98□□□□□ -0.17
MRPL40-202ENST00000443660 ABATP80404 500 aa13.98□□□□□ -0.17
MRPL40-202ENST00000443660 ACVR1Q04771 509 aa13.98□□□□□ -0.17
MRPL40-202ENST00000443660 ARHGAP19Q14CB8 494 aa13.98□□□□□ -0.17
MRPL40-202ENST00000443660 NSDHLQ15738 373 aa13.98□□□□□ -0.17
MRPL40-202ENST00000443660 SFT2D3Q587I9 215 aa13.98□□□□□ -0.17
MRPL40-202ENST00000443660 ICE2Q659A1 982 aa13.98□□□□□ -0.17
MRPL40-202ENST00000443660 ZNF425Q6IV72 752 aa13.98□□□□□ -0.17
MRPL40-202ENST00000443660 PAPD4Q6PIY7 484 aaKnown RBP13.98□□□□□ -0.17
MRPL40-202ENST00000443660 LRRC6Q86X45 466 aa13.98□□□□□ -0.17
MRPL40-202ENST00000443660 TP63Q9H3D4 680 aaPredicted RBP13.98□□□□□ -0.17
MRPL40-202ENST00000443660 SYNPO2LQ9H987 977 aa13.98□□□□□ -0.17
MRPL40-202ENST00000443660 FAM114A2Q9NRY5 505 aa13.98□□□□□ -0.17
MRPL40-202ENST00000443660 DNAJB12Q9NXW2 375 aaKnown RBP13.98□□□□□ -0.17
MRPL40-202ENST00000443660 TAC3Q9UHF0 121 aa13.98□□□□□ -0.17
MRPL40-202ENST00000443660 GTF3C3Q9Y5Q9 886 aa13.98□□□□□ -0.17
MRPL40-202ENST00000443660 SPG11Q96JI7 2443 aa13.98□□□□□ -0.17
MRPL40-202ENST00000443660 IGKV1-8A0A0C4DH67 115 aa13.97□□□□□ -0.17
MRPL40-202ENST00000443660 OR2W5A6NFC9 320 aa13.97□□□□□ -0.17
MRPL40-202ENST00000443660 TMEM200CA6NKL6 621 aa13.97□□□□□ -0.17
MRPL40-202ENST00000443660 KLRC4-KLRK1H3BQV0 150 aa13.97□□□□□ -0.17
MRPL40-202ENST00000443660 CD3EAPO15446 510 aaKnown RBP13.97□□□□□ -0.17
MRPL40-202ENST00000443660 CBFA2T2O43439 604 aa13.97□□□□□ -0.17
MRPL40-202ENST00000443660 CDC40O60508 579 aaKnown RBP eCLIP13.97□□□□□ -0.17
MRPL40-202ENST00000443660 MATN4O95460 622 aa13.97□□□□□ -0.17
MRPL40-202ENST00000443660 TFF3Q07654 80 aa13.97□□□□□ -0.17
MRPL40-202ENST00000443660 MEI1Q5TIA1 1274 aa13.97□□□□□ -0.17
MRPL40-202ENST00000443660 MYRIPQ8NFW9 859 aa13.97□□□□□ -0.17
MRPL40-202ENST00000443660 PEX13Q92968 403 aa13.97□□□□□ -0.17
MRPL40-202ENST00000443660 ZNF778Q96MU6 729 aa13.97□□□□□ -0.17
MRPL40-202ENST00000443660 P2RY12Q9H244 342 aa13.97□□□□□ -0.17
MRPL40-202ENST00000443660 GSX1Q9H4S2 264 aaPredicted RBP13.97□□□□□ -0.17
MRPL40-202ENST00000443660 ABCF3Q9NUQ8 709 aa13.97□□□□□ -0.17
MRPL40-202ENST00000443660 HCN3Q9P1Z3 774 aa13.97□□□□□ -0.17
MRPL40-202ENST00000443660 TSR3Q9UJK0 312 aaKnown RBP13.97□□□□□ -0.17
MRPL40-202ENST00000443660 R3HDM2Q9Y2K5 976 aaKnown RBP13.97□□□□□ -0.17
MRPL40-202ENST00000443660 CACNA1CQ13936 2221 aa13.96□□□□□ -0.17
MRPL40-202ENST00000443660 MAP1AP78559 2803 aaPredicted RBP13.96□□□□□ -0.17
MRPL40-202ENST00000443660 E7EVH7 732 aa13.96□□□□□ -0.17
MRPL40-202ENST00000443660 P2RX6O15547 441 aa13.96□□□□□ -0.17
MRPL40-202ENST00000443660 MFAP3LO75121 409 aa13.96□□□□□ -0.17
MRPL40-202ENST00000443660 ERGP11308 486 aa13.96□□□□□ -0.17
MRPL40-202ENST00000443660 BCL6P41182 706 aa13.96□□□□□ -0.17
MRPL40-202ENST00000443660 PNLIPRP1P54315 467 aa13.96□□□□□ -0.17
MRPL40-202ENST00000443660 PMPCAQ10713 525 aa13.96□□□□□ -0.17
MRPL40-202ENST00000443660 ACAD11Q709F0 780 aa13.96□□□□□ -0.17
MRPL40-202ENST00000443660 PCGF5Q86SE9 256 aa13.96□□□□□ -0.17
MRPL40-202ENST00000443660 CCDC71Q8IV32 467 aaPredicted RBP13.96□□□□□ -0.17
MRPL40-202ENST00000443660 MARVELD2Q8N4S9 558 aa13.96□□□□□ -0.17
MRPL40-202ENST00000443660 ANKHQ9HCJ1 492 aa13.96□□□□□ -0.17
MRPL40-202ENST00000443660 KLF13Q9Y2Y9 288 aaPredicted RBP13.96□□□□□ -0.17
MRPL40-202ENST00000443660 SGK494L7N484 410 aa13.95□□□□□ -0.18
MRPL40-202ENST00000443660 HAT1O14929 419 aa13.95□□□□□ -0.18
MRPL40-202ENST00000443660 TFEBP19484 476 aa13.95□□□□□ -0.18
MRPL40-202ENST00000443660 IL10P22301 178 aa13.95□□□□□ -0.18
MRPL40-202ENST00000443660 RPS3P23396 243 aaKnown RBP eCLIP13.95□□□□□ -0.187e-16■■■□□ 19
MRPL40-202ENST00000443660 DNASE1P24855 282 aa13.95□□□□□ -0.18
MRPL40-202ENST00000443660 TPP2P29144 1249 aaPredicted RBP13.95□□□□□ -0.18
MRPL40-202ENST00000443660 EIF3BP55884 814 aaKnown RBP13.95□□□□□ -0.18
MRPL40-202ENST00000443660 OR4D2P58180 307 aa13.95□□□□□ -0.18
MRPL40-202ENST00000443660 SLC26A5P58743 744 aa13.95□□□□□ -0.18
MRPL40-202ENST00000443660 FOXD4Q12950 439 aaPredicted RBP13.95□□□□□ -0.18
MRPL40-202ENST00000443660 USP10Q14694 798 aaKnown RBP13.95□□□□□ -0.18
MRPL40-202ENST00000443660 ABRAXAS2Q15018 415 aa13.95□□□□□ -0.18
MRPL40-202ENST00000443660 CEBPEQ15744 281 aa13.95□□□□□ -0.18
MRPL40-202ENST00000443660 THEMIS2Q5TEJ8 643 aa13.95□□□□□ -0.18
MRPL40-202ENST00000443660 ZNF468Q5VIY5 522 aaPredicted RBP13.95□□□□□ -0.18
MRPL40-202ENST00000443660 ARHGAP11AQ6P4F7 1023 aa13.95□□□□□ -0.18
MRPL40-202ENST00000443660 PAOXQ6QHF9 649 aa13.95□□□□□ -0.18
MRPL40-202ENST00000443660 PLD3Q8IV08 490 aa13.95□□□□□ -0.18
MRPL40-202ENST00000443660 PLPP5Q8NEB5 264 aa13.95□□□□□ -0.18
MRPL40-202ENST00000443660 PPHLN1Q8NEY8 458 aaKnown RBP13.95□□□□□ -0.18
MRPL40-202ENST00000443660 CALR3Q96L12 384 aaKnown RBP13.95□□□□□ -0.18
MRPL40-202ENST00000443660 POLDIP3Q9BY77 421 aaKnown RBP13.95□□□□□ -0.18
MRPL40-202ENST00000443660 MARCH4Q9P2E8 410 aaPredicted RBP13.95□□□□□ -0.18
MRPL40-202ENST00000443660 ST6GALNAC2Q9UJ37 374 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms