RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 SLC39A8Q9C0K1 460 aa4.87□□□□□ -1.63
HERC1-201ENST00000443617 RAD18Q9NS91 495 aa4.87□□□□□ -1.63
HERC1-201ENST00000443617 C5P01031 1676 aa4.87□□□□□ -1.63
HERC1-201ENST00000443617 MYO7AQ13402 2215 aa4.87□□□□□ -1.63
HERC1-201ENST00000443617 A0A1B0GVI7 797 aa4.87□□□□□ -1.63
HERC1-201ENST00000443617 M0R233 179 aa4.87□□□□□ -1.63
HERC1-201ENST00000443617 WNT9AO14904 365 aa4.87□□□□□ -1.63
HERC1-201ENST00000443617 F8A1P23610 371 aa4.87□□□□□ -1.63
HERC1-201ENST00000443617 LCN1P31025 176 aa4.87□□□□□ -1.63
HERC1-201ENST00000443617 CHI3L1P36222 383 aaPredicted RBP4.87□□□□□ -1.63
HERC1-201ENST00000443617 TEKQ02763 1124 aa4.87□□□□□ -1.63
HERC1-201ENST00000443617 NOTUMQ6P988 496 aa4.87□□□□□ -1.63
HERC1-201ENST00000443617 SIDT2Q8NBJ9 832 aaKnown RBP4.87□□□□□ -1.63
HERC1-201ENST00000443617 QRFPRQ96P65 431 aa4.87□□□□□ -1.63
HERC1-201ENST00000443617 IFT46Q9NQC8 304 aa4.87□□□□□ -1.63
HERC1-201ENST00000443617 OR4F21O95013 312 aa4.87□□□□□ -1.63
HERC1-201ENST00000443617 HOXB1P14653 301 aaPredicted RBP4.87□□□□□ -1.63
HERC1-201ENST00000443617 TARBP2Q15633 366 aaKnown RBP4.87□□□□□ -1.63
HERC1-201ENST00000443617 CRYBG2Q8N1P7 616 aa4.87□□□□□ -1.63
HERC1-201ENST00000443617 LHFPL5Q8TAF8 219 aa4.87□□□□□ -1.63
HERC1-201ENST00000443617 PLCXD1Q9NUJ7 323 aa4.87□□□□□ -1.63
HERC1-201ENST00000443617 SDHAF2Q9NX18 166 aa4.87□□□□□ -1.63
HERC1-201ENST00000443617 PSIP1O75475 530 aaKnown RBP4.87□□□□□ -1.63
HERC1-201ENST00000443617 CSF3P09919 207 aa4.87□□□□□ -1.63
HERC1-201ENST00000443617 HOXD10P28358 340 aa4.87□□□□□ -1.63
HERC1-201ENST00000443617 PITX1P78337 314 aaPredicted RBP4.87□□□□□ -1.63
HERC1-201ENST00000443617 B3GNT7Q8NFL0 401 aa4.87□□□□□ -1.63
HERC1-201ENST00000443617 CDCA4Q9BXL8 241 aa4.87□□□□□ -1.63
HERC1-201ENST00000443617 POLR2J3Q9H1A7 115 aaKnown RBP4.87□□□□□ -1.63
HERC1-201ENST00000443617 MINDY3Q9H8M7 445 aa4.87□□□□□ -1.63
HERC1-201ENST00000443617 SDK1Q7Z5N4 2213 aa4.87□□□□□ -1.63
HERC1-201ENST00000443617 SLC9A3R1O14745 358 aaPredicted RBP4.87□□□□□ -1.63
HERC1-201ENST00000443617 PTPN5P54829 565 aa4.87□□□□□ -1.63
HERC1-201ENST00000443617 SPANXN4Q5MJ08 99 aa4.87□□□□□ -1.63
HERC1-201ENST00000443617 RHNO1Q9BSD3 238 aa4.87□□□□□ -1.63
HERC1-201ENST00000443617 AARSD1Q9BTE6 412 aaKnown RBP4.87□□□□□ -1.63
HERC1-201ENST00000443617 TSSK6Q9BXA6 273 aa4.87□□□□□ -1.63
HERC1-201ENST00000443617 PIGUQ9H490 435 aa4.87□□□□□ -1.63
HERC1-201ENST00000443617 SLC52A3Q9NQ40 469 aa4.87□□□□□ -1.63
HERC1-201ENST00000443617 CORO2BQ9UQ03 480 aa4.87□□□□□ -1.63
HERC1-201ENST00000443617 ZNF451Q9Y4E5 1061 aa4.87□□□□□ -1.63
HERC1-201ENST00000443617 H7C2Y5 167 aa4.86□□□□□ -1.63
HERC1-201ENST00000443617 ACSL4O60488 711 aa4.86□□□□□ -1.63
HERC1-201ENST00000443617 TAF6P49848 677 aa4.86□□□□□ -1.63
HERC1-201ENST00000443617 BAMBIQ13145 260 aa4.86□□□□□ -1.63
HERC1-201ENST00000443617 HEPACAMQ14CZ8 416 aa4.86□□□□□ -1.63
HERC1-201ENST00000443617 GPR68Q15743 365 aa4.86□□□□□ -1.63
HERC1-201ENST00000443617 NLRP8Q86W28 1048 aa4.86□□□□□ -1.63
HERC1-201ENST00000443617 NUDT8Q8WV74 236 aa4.86□□□□□ -1.63
HERC1-201ENST00000443617 IPPKQ9H8X2 491 aa4.86□□□□□ -1.63
HERC1-201ENST00000443617 RNF19AQ9NV58 838 aa4.86□□□□□ -1.63
HERC1-201ENST00000443617 J3KR12 359 aa4.86□□□□□ -1.63
HERC1-201ENST00000443617 M0R082 166 aa4.86□□□□□ -1.63
HERC1-201ENST00000443617 TGM4P49221 684 aa4.86□□□□□ -1.63
HERC1-201ENST00000443617 CXCR3P49682 368 aa4.86□□□□□ -1.63
HERC1-201ENST00000443617 SWI5Q1ZZU3 235 aa4.86□□□□□ -1.63
HERC1-201ENST00000443617 NADSYN1Q6IA69 706 aa4.86□□□□□ -1.63
HERC1-201ENST00000443617 APOLD1Q96LR9 279 aa4.86□□□□□ -1.63
HERC1-201ENST00000443617 HBEGFQ99075 208 aa4.86□□□□□ -1.63
HERC1-201ENST00000443617 TTYH1Q9H313 450 aaPredicted RBP4.86□□□□□ -1.63
HERC1-201ENST00000443617 GALNT9Q9HCQ5 603 aa4.86□□□□□ -1.63
HERC1-201ENST00000443617 ARL5AQ9Y689 179 aa4.86□□□□□ -1.63
HERC1-201ENST00000443617 IRGMA1A4Y4 181 aa4.86□□□□□ -1.63
HERC1-201ENST00000443617 CASKO14936 926 aa4.86□□□□□ -1.63
HERC1-201ENST00000443617 AXIN1O15169 862 aa4.86□□□□□ -1.63
HERC1-201ENST00000443617 EEF1E1O43324 174 aaKnown RBP4.86□□□□□ -1.63
HERC1-201ENST00000443617 WEE1P30291 646 aa4.86□□□□□ -1.63
HERC1-201ENST00000443617 SRSF11Q05519 484 aaKnown RBP4.86□□□□□ -1.63
HERC1-201ENST00000443617 FCN2Q15485 313 aa4.86□□□□□ -1.63
HERC1-201ENST00000443617 RBPMSQ93062 196 aaKnown RBP4.86□□□□□ -1.63
HERC1-201ENST00000443617 COQ8BQ96D53 544 aa4.86□□□□□ -1.63
HERC1-201ENST00000443617 FAM129BQ96TA1 746 aa4.86□□□□□ -1.63
HERC1-201ENST00000443617 TMEM43Q9BTV4 400 aa4.86□□□□□ -1.63
HERC1-201ENST00000443617 IFT22Q9H7X7 185 aa4.86□□□□□ -1.63
HERC1-201ENST00000443617 QTRT2Q9H974 415 aaKnown RBP4.86□□□□□ -1.63
HERC1-201ENST00000443617 TMEM39AQ9NV64 488 aa4.86□□□□□ -1.63
HERC1-201ENST00000443617 TAS2R16Q9NYV7 291 aa4.86□□□□□ -1.63
HERC1-201ENST00000443617 LYRM1O43325 122 aa4.86□□□□□ -1.63
HERC1-201ENST00000443617 RRAS2P62070 204 aaPredicted RBP4.86□□□□□ -1.63
HERC1-201ENST00000443617 KLHL22Q53GT1 634 aa4.86□□□□□ -1.63
HERC1-201ENST00000443617 OR4M2Q8NGB6 313 aa4.86□□□□□ -1.63
HERC1-201ENST00000443617 OR2T11Q8NH01 316 aa4.86□□□□□ -1.63
HERC1-201ENST00000443617 SEMA3CQ99985 751 aa4.86□□□□□ -1.63
HERC1-201ENST00000443617 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.86□□□□□ -1.63
HERC1-201ENST00000443617 TMEM168Q9H0V1 697 aa4.86□□□□□ -1.63
HERC1-201ENST00000443617 ASAH2Q9NR71 780 aa4.86□□□□□ -1.63
HERC1-201ENST00000443617 VNN3Q9NY84 501 aa4.86□□□□□ -1.63
HERC1-201ENST00000443617 EMC3Q9P0I2 261 aa4.86□□□□□ -1.63
HERC1-201ENST00000443617 PFDN2Q9UHV9 154 aa4.86□□□□□ -1.63
HERC1-201ENST00000443617 SPIN1Q9Y657 262 aaPredicted RBP4.86□□□□□ -1.63
HERC1-201ENST00000443617 ZNF806P0C7X5 589 aa4.86□□□□□ -1.63
HERC1-201ENST00000443617 ITGB7P26010 798 aa4.86□□□□□ -1.63
HERC1-201ENST00000443617 HTR7P34969 479 aa4.86□□□□□ -1.63
HERC1-201ENST00000443617 DSC2Q02487 901 aa4.86□□□□□ -1.63
HERC1-201ENST00000443617 NOMO2Q5JPE7 1267 aa4.86□□□□□ -1.63
HERC1-201ENST00000443617 RRM2BQ7LG56 351 aa4.86□□□□□ -1.63
HERC1-201ENST00000443617 KCTD13Q8WZ19 329 aa4.86□□□□□ -1.63
HERC1-201ENST00000443617 UFD1Q92890 307 aa4.86□□□□□ -1.63
HERC1-201ENST00000443617 CDCA5Q96FF9 252 aa4.86□□□□□ -1.63
HERC1-201ENST00000443617 C11orf84Q9BUA3 381 aaPredicted RBP4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms