RNA–Protein interactions for RNA: ENST00000442679.5

USP1-203, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 2

Gene USP1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-203ENST00000442679 PCBP2Q15366 365 aaKnown RBP eCLIP11.76□□□□□ -0.53
USP1-203ENST00000442679 XKR6Q5GH73 641 aa11.76□□□□□ -0.53
USP1-203ENST00000442679 LCN10Q6JVE6 187 aa11.76□□□□□ -0.53
USP1-203ENST00000442679 C19orf48Q6RUI8 117 aa11.76□□□□□ -0.53
USP1-203ENST00000442679 CCDC81Q6ZN84 652 aa11.76□□□□□ -0.53
USP1-203ENST00000442679 VN1R4Q7Z5H5 301 aa11.76□□□□□ -0.53
USP1-203ENST00000442679 ASPGQ86U10 573 aa11.76□□□□□ -0.53
USP1-203ENST00000442679 IQCKQ8N0W5 287 aa11.76□□□□□ -0.53
USP1-203ENST00000442679 C4orf33Q8N1A6 199 aa11.76□□□□□ -0.53
USP1-203ENST00000442679 CAMKVQ8NCB2 501 aa11.76□□□□□ -0.53
USP1-203ENST00000442679 PROKR1Q8TCW9 393 aa11.76□□□□□ -0.53
USP1-203ENST00000442679 SLC13A3Q8WWT9 602 aa11.76□□□□□ -0.53
USP1-203ENST00000442679 TM4SF19Q96DZ7 209 aa11.76□□□□□ -0.53
USP1-203ENST00000442679 GBP5Q96PP8 586 aa11.76□□□□□ -0.53
USP1-203ENST00000442679 MACROD1Q9BQ69 325 aa11.76□□□□□ -0.53
USP1-203ENST00000442679 EFHD1Q9BUP0 239 aa11.76□□□□□ -0.53
USP1-203ENST00000442679 SPNS1Q9H2V7 528 aa11.76□□□□□ -0.53
USP1-203ENST00000442679 EHD1Q9H4M9 534 aa11.76□□□□□ -0.53
USP1-203ENST00000442679 GEMIN8Q9NWZ8 242 aaKnown RBP11.76□□□□□ -0.53
USP1-203ENST00000442679 RUVBL1Q9Y265 456 aaKnown RBP11.76□□□□□ -0.53
USP1-203ENST00000442679 TPRP12270 2363 aaKnown RBP11.75□□□□□ -0.53
USP1-203ENST00000442679 A0A1B0GX78 115 aa11.75□□□□□ -0.53
USP1-203ENST00000442679 C21orf140B9A014 251 aa11.75□□□□□ -0.53
USP1-203ENST00000442679 STX16-NPEPL1H3BU86 382 aa11.75□□□□□ -0.53
USP1-203ENST00000442679 COPEO14579 308 aa11.75□□□□□ -0.53
USP1-203ENST00000442679 STX16O14662 325 aa11.75□□□□□ -0.53
USP1-203ENST00000442679 TERTO14746 1132 aaKnown RBP11.75□□□□□ -0.53
USP1-203ENST00000442679 P2RX6O15547 441 aa11.75□□□□□ -0.53
USP1-203ENST00000442679 PRAMEF4O60810 478 aa11.75□□□□□ -0.53
USP1-203ENST00000442679 GLRA3O75311 464 aa11.75□□□□□ -0.53
USP1-203ENST00000442679 KATNA1O75449 491 aa11.75□□□□□ -0.53
USP1-203ENST00000442679 MED26O95402 600 aa11.75□□□□□ -0.53
USP1-203ENST00000442679 SERPIND1P05546 499 aa11.75□□□□□ -0.53
USP1-203ENST00000442679 F8A1P23610 371 aa11.75□□□□□ -0.53
USP1-203ENST00000442679 EEF1DP29692 281 aaKnown RBP11.75□□□□□ -0.53
USP1-203ENST00000442679 CRHR1P34998 444 aa11.75□□□□□ -0.53
USP1-203ENST00000442679 AHRP35869 848 aa11.75□□□□□ -0.53
USP1-203ENST00000442679 CASP2P42575 452 aa11.75□□□□□ -0.53
USP1-203ENST00000442679 SCTRP47872 440 aa11.75□□□□□ -0.53
USP1-203ENST00000442679 TMPRSS3P57727 454 aa11.75□□□□□ -0.53
USP1-203ENST00000442679 RPS15P62841 145 aaKnown RBP11.75□□□□□ -0.53
USP1-203ENST00000442679 IRF8Q02556 426 aa11.75□□□□□ -0.53
USP1-203ENST00000442679 SLC18A2Q05940 514 aa11.75□□□□□ -0.53
USP1-203ENST00000442679 ZNF844Q08AG5 666 aa11.75□□□□□ -0.53
USP1-203ENST00000442679 CHIT1Q13231 466 aa11.75□□□□□ -0.53
USP1-203ENST00000442679 DNASE1L3Q13609 305 aa11.75□□□□□ -0.53
USP1-203ENST00000442679 GTF2H2Q13888 395 aa11.75□□□□□ -0.53
USP1-203ENST00000442679 DOC2AQ14183 400 aa11.75□□□□□ -0.53
USP1-203ENST00000442679 SLBPQ14493 270 aaKnown RBP eCLIP11.75□□□□□ -0.53
USP1-203ENST00000442679 HIST2H2ACQ16777 129 aaPredicted RBP11.75□□□□□ -0.53
USP1-203ENST00000442679 MUM1Q2TAK8 710 aa11.75□□□□□ -0.53
USP1-203ENST00000442679 KRT71Q3SY84 523 aa11.75□□□□□ -0.53
USP1-203ENST00000442679 NKAIN1Q4KMZ8 207 aa11.75□□□□□ -0.53
USP1-203ENST00000442679 BEND6Q5SZJ8 279 aaPredicted RBP11.75□□□□□ -0.53
USP1-203ENST00000442679 GARNL3Q5VVW2 1013 aa11.75□□□□□ -0.53
USP1-203ENST00000442679 PRAMEF9Q5VWM5 478 aa11.75□□□□□ -0.53
USP1-203ENST00000442679 ZNF385CQ66K41 422 aaPredicted RBP11.75□□□□□ -0.53
USP1-203ENST00000442679 HIST2H2AA3Q6FI13 130 aa11.75□□□□□ -0.53
USP1-203ENST00000442679 GTF2H2CQ6P1K8 395 aa11.75□□□□□ -0.53
USP1-203ENST00000442679 METTL2BQ6P1Q9 378 aaKnown RBP11.75□□□□□ -0.53
USP1-203ENST00000442679 ZNF517Q6ZMY9 492 aaPredicted RBP11.75□□□□□ -0.53
USP1-203ENST00000442679 TRABD2AQ86V40 505 aa11.75□□□□□ -0.53
USP1-203ENST00000442679 KRT78Q8N1N4 520 aa11.75□□□□□ -0.53
USP1-203ENST00000442679 ZSCAN1Q8NBB4 408 aa11.75□□□□□ -0.53
USP1-203ENST00000442679 WDR34Q96EX3 536 aa11.75□□□□□ -0.53
USP1-203ENST00000442679 PTCD3Q96EY7 689 aaKnown RBP11.75□□□□□ -0.53
USP1-203ENST00000442679 C10orf90Q96M02 699 aa11.75□□□□□ -0.53
USP1-203ENST00000442679 GPR87Q9BY21 358 aa11.75□□□□□ -0.53
USP1-203ENST00000442679 CPNE5Q9HCH3 593 aa11.75□□□□□ -0.53
USP1-203ENST00000442679 IFT80Q9P2H3 777 aaPredicted RBP11.75□□□□□ -0.53
USP1-203ENST00000442679 IL17BQ9UHF5 180 aa11.75□□□□□ -0.53
USP1-203ENST00000442679 ZFP69BQ9UJL9 534 aa11.75□□□□□ -0.53
USP1-203ENST00000442679 KCND3Q9UK17 655 aa11.75□□□□□ -0.53
USP1-203ENST00000442679 EMCNQ9ULC0 261 aa11.75□□□□□ -0.53
USP1-203ENST00000442679 GRID1Q9ULK0 1009 aa11.75□□□□□ -0.53
USP1-203ENST00000442679 FARSAQ9Y285 508 aaKnown RBP11.75□□□□□ -0.53
USP1-203ENST00000442679 SDK2Q58EX2 2172 aa11.75□□□□□ -0.53
USP1-203ENST00000442679 DSPP15924 2871 aaKnown RBP11.74□□□□□ -0.53
USP1-203ENST00000442679 A8MT66 165 aa11.74□□□□□ -0.53
USP1-203ENST00000442679 C9J4A7 227 aa11.74□□□□□ -0.53
USP1-203ENST00000442679 E2F3O00716 465 aa11.74□□□□□ -0.53
USP1-203ENST00000442679 NDUFS4O43181 175 aa11.74□□□□□ -0.53
USP1-203ENST00000442679 CTIFO43310 598 aaKnown RBP11.74□□□□□ -0.53
USP1-203ENST00000442679 DLX3O60479 287 aa11.74□□□□□ -0.53
USP1-203ENST00000442679 RAB40ALP0C0E4 278 aa11.74□□□□□ -0.53
USP1-203ENST00000442679 SLC35G6P0C7Q6 338 aa11.74□□□□□ -0.53
USP1-203ENST00000442679 PIM1P11309 404 aaPredicted RBP11.74□□□□□ -0.53
USP1-203ENST00000442679 WT1P19544 449 aaPredicted RBP11.74□□□□□ -0.53
USP1-203ENST00000442679 ATP5F1P24539 256 aaPredicted RBP11.74□□□□□ -0.53
USP1-203ENST00000442679 PIK3CGP48736 1102 aa11.74□□□□□ -0.53
USP1-203ENST00000442679 CXADRP78310 365 aa11.74□□□□□ -0.53
USP1-203ENST00000442679 PCDH1Q08174 1060 aa11.74□□□□□ -0.53
USP1-203ENST00000442679 VAC14Q08AM6 782 aa11.74□□□□□ -0.53
USP1-203ENST00000442679 LAPTM5Q13571 262 aa11.74□□□□□ -0.53
USP1-203ENST00000442679 PWP1Q13610 501 aa11.74□□□□□ -0.53
USP1-203ENST00000442679 SLC9A5Q14940 896 aa11.74□□□□□ -0.53
USP1-203ENST00000442679 TBCCQ15814 346 aa11.74□□□□□ -0.53
USP1-203ENST00000442679 NDUFA9Q16795 377 aa11.74□□□□□ -0.53
USP1-203ENST00000442679 CCDC153Q494R4 210 aa11.74□□□□□ -0.53
USP1-203ENST00000442679 PAGE2BQ5JRK9 111 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms