RNA–Protein interactions for RNA: ENST00000439185.1

UPP2-IT1-201, UPP2 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene UPP2-IT1, Length 357 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPP2-IT1-201ENST00000439185 TDRD1Q9BXT4 1180 aaKnown RBP3□□□□□ -1.93
UPP2-IT1-201ENST00000439185 RABEP2Q9H5N1 569 aa3□□□□□ -1.93
UPP2-IT1-201ENST00000439185 DNAJC4Q9NNZ3 241 aa3□□□□□ -1.93
UPP2-IT1-201ENST00000439185 B3GAT2Q9NPZ5 323 aa3□□□□□ -1.93
UPP2-IT1-201ENST00000439185 GSN-AS1Q9NRJ2 163 aa3□□□□□ -1.93
UPP2-IT1-201ENST00000439185 CLIC5Q9NZA1 410 aa3□□□□□ -1.93
UPP2-IT1-201ENST00000439185 C5AR2Q9P296 337 aa3□□□□□ -1.93
UPP2-IT1-201ENST00000439185 CCL27Q9Y4X3 112 aa3□□□□□ -1.93
UPP2-IT1-201ENST00000439185 COL4A4P53420 1690 aaPredicted RBP3□□□□□ -1.93
UPP2-IT1-201ENST00000439185 COL16A1Q07092 1604 aaPredicted RBP3□□□□□ -1.93
UPP2-IT1-201ENST00000439185 TRAV24A0A0B4J272 114 aa2.99□□□□□ -1.93
UPP2-IT1-201ENST00000439185 SHISA9B4DS77 424 aa2.99□□□□□ -1.93
UPP2-IT1-201ENST00000439185 AP5Z1O43299 807 aa2.99□□□□□ -1.93
UPP2-IT1-201ENST00000439185 KRT33AO76009 404 aa2.99□□□□□ -1.93
UPP2-IT1-201ENST00000439185 ERCC2P18074 760 aa2.99□□□□□ -1.93
UPP2-IT1-201ENST00000439185 CD27P26842 260 aa2.99□□□□□ -1.93
UPP2-IT1-201ENST00000439185 OXTRP30559 389 aa2.99□□□□□ -1.93
UPP2-IT1-201ENST00000439185 MYL7Q01449 175 aa2.99□□□□□ -1.93
UPP2-IT1-201ENST00000439185 TRAP1Q12931 704 aaKnown RBP2.99□□□□□ -1.93
UPP2-IT1-201ENST00000439185 ZNF74Q16587 644 aa2.99□□□□□ -1.93
UPP2-IT1-201ENST00000439185 GDPGP1Q6ZNW5 385 aa2.99□□□□□ -1.93
UPP2-IT1-201ENST00000439185 IL17RELQ6ZVW7 336 aa2.99□□□□□ -1.93
UPP2-IT1-201ENST00000439185 CHST3Q7LGC8 479 aa2.99□□□□□ -1.93
UPP2-IT1-201ENST00000439185 GPD1LQ8N335 351 aa2.99□□□□□ -1.93
UPP2-IT1-201ENST00000439185 SUMF1Q8NBK3 374 aa2.99□□□□□ -1.93
UPP2-IT1-201ENST00000439185 NOA1Q8NC60 698 aaKnown RBP2.99□□□□□ -1.93
UPP2-IT1-201ENST00000439185 CCDC191Q8NCU4 936 aa2.99□□□□□ -1.93
UPP2-IT1-201ENST00000439185 OR6J1Q8NGC5 347 aa2.99□□□□□ -1.93
UPP2-IT1-201ENST00000439185 TYMSOSQ8TAI1 123 aa2.99□□□□□ -1.93
UPP2-IT1-201ENST00000439185 PROX1Q92786 737 aa2.99□□□□□ -1.93
UPP2-IT1-201ENST00000439185 ATXN7L3BQ96GX2 97 aa2.99□□□□□ -1.93
UPP2-IT1-201ENST00000439185 LPAR4Q99677 370 aa2.99□□□□□ -1.93
UPP2-IT1-201ENST00000439185 MAP3K3Q99759 626 aa2.99□□□□□ -1.93
UPP2-IT1-201ENST00000439185 SLC25A23Q9BV35 468 aa2.99□□□□□ -1.93
UPP2-IT1-201ENST00000439185 SLC2A11Q9BYW1 496 aa2.99□□□□□ -1.93
UPP2-IT1-201ENST00000439185 TERF2IPQ9NYB0 399 aa2.99□□□□□ -1.93
UPP2-IT1-201ENST00000439185 TXNDC16Q9P2K2 825 aa2.99□□□□□ -1.93
UPP2-IT1-201ENST00000439185 FRMD4AQ9P2Q2 1039 aaPredicted RBP2.99□□□□□ -1.93
UPP2-IT1-201ENST00000439185 CHKBQ9Y259 395 aa2.99□□□□□ -1.93
UPP2-IT1-201ENST00000439185 R4GN57 208 aa2.99□□□□□ -1.93
UPP2-IT1-201ENST00000439185 A0A087WUV0 522 aaPredicted RBP2.98□□□□□ -1.93
UPP2-IT1-201ENST00000439185 TRBV5-5A0A0J9YX44 114 aa2.98□□□□□ -1.93
UPP2-IT1-201ENST00000439185 SNURFLB1AK76 121 aa2.98□□□□□ -1.93
UPP2-IT1-201ENST00000439185 C2CD4DB7Z1M9 353 aa2.98□□□□□ -1.93
UPP2-IT1-201ENST00000439185 H0YAE9 185 aa2.98□□□□□ -1.93
UPP2-IT1-201ENST00000439185 SNX3O60493 162 aa2.98□□□□□ -1.93
UPP2-IT1-201ENST00000439185 RPS6KA5O75582 802 aa2.98□□□□□ -1.93
UPP2-IT1-201ENST00000439185 ATP6AP2O75787 350 aa2.98□□□□□ -1.93
UPP2-IT1-201ENST00000439185 POP4O95707 220 aaKnown RBP2.98□□□□□ -1.93
UPP2-IT1-201ENST00000439185 ZBTB25P24278 435 aa2.98□□□□□ -1.93
UPP2-IT1-201ENST00000439185 AZGP1P25311 298 aaKnown RBP2.98□□□□□ -1.93
UPP2-IT1-201ENST00000439185 LBX1P52954 281 aa2.98□□□□□ -1.93
UPP2-IT1-201ENST00000439185 FCHO2Q0JRZ9 810 aa2.98□□□□□ -1.93
UPP2-IT1-201ENST00000439185 KCTD2Q14681 263 aa2.98□□□□□ -1.93
UPP2-IT1-201ENST00000439185 EFTUD2Q15029 972 aaKnown RBP eCLIP2.98□□□□□ -1.93
UPP2-IT1-201ENST00000439185 EXT1Q16394 746 aa2.98□□□□□ -1.93
UPP2-IT1-201ENST00000439185 TMED8Q6PL24 325 aaPredicted RBP2.98□□□□□ -1.93
UPP2-IT1-201ENST00000439185 VITQ6UXI7 678 aa2.98□□□□□ -1.93
UPP2-IT1-201ENST00000439185 LEKR1Q6ZMV7 388 aa2.98□□□□□ -1.93
UPP2-IT1-201ENST00000439185 CAMKVQ8NCB2 501 aa2.98□□□□□ -1.93
UPP2-IT1-201ENST00000439185 SLC37A3Q8NCC5 494 aa2.98□□□□□ -1.93
UPP2-IT1-201ENST00000439185 OR7A2PQ8NGA2 310 aa2.98□□□□□ -1.93
UPP2-IT1-201ENST00000439185 NPRL2Q8WTW4 380 aa2.98□□□□□ -1.93
UPP2-IT1-201ENST00000439185 SNRNP27Q8WVK2 155 aaKnown RBP2.98□□□□□ -1.93
UPP2-IT1-201ENST00000439185 KCNE4Q8WWG9 221 aa2.98□□□□□ -1.93
UPP2-IT1-201ENST00000439185 EXT2Q93063 718 aa2.98□□□□□ -1.93
UPP2-IT1-201ENST00000439185 CNOT6LQ96LI5 555 aaKnown RBP2.98□□□□□ -1.93
UPP2-IT1-201ENST00000439185 ZNF558Q96NG5 402 aa2.98□□□□□ -1.93
UPP2-IT1-201ENST00000439185 SERINC2Q96SA4 455 aa2.98□□□□□ -1.93
UPP2-IT1-201ENST00000439185 NAA11Q9BSU3 229 aaPredicted RBP2.98□□□□□ -1.93
UPP2-IT1-201ENST00000439185 ANKRD2Q9GZV1 360 aa2.98□□□□□ -1.93
UPP2-IT1-201ENST00000439185 TUBB1Q9H4B7 451 aa2.98□□□□□ -1.93
UPP2-IT1-201ENST00000439185 SHISA7A6NL88 538 aa2.97□□□□□ -1.93
UPP2-IT1-201ENST00000439185 FPGTO14772 594 aa2.97□□□□□ -1.93
UPP2-IT1-201ENST00000439185 TFECO14948 347 aaPredicted RBP2.97□□□□□ -1.93
UPP2-IT1-201ENST00000439185 TEX28O15482 410 aa2.97□□□□□ -1.93
UPP2-IT1-201ENST00000439185 DIAPH2O60879 1101 aa2.97□□□□□ -1.93
UPP2-IT1-201ENST00000439185 GSRP00390 522 aa2.97□□□□□ -1.93
UPP2-IT1-201ENST00000439185 CCDC175P0C221 793 aa2.97□□□□□ -1.93
UPP2-IT1-201ENST00000439185 PDHA2P29803 388 aa2.97□□□□□ -1.93
UPP2-IT1-201ENST00000439185 HSPA4P34932 840 aa2.97□□□□□ -1.93
UPP2-IT1-201ENST00000439185 HSD17B3P37058 310 aa2.97□□□□□ -1.93
UPP2-IT1-201ENST00000439185 ETV5P41161 510 aa2.97□□□□□ -1.93
UPP2-IT1-201ENST00000439185 DNA2P51530 1060 aa2.97□□□□□ -1.93
UPP2-IT1-201ENST00000439185 RAD23AP54725 363 aa2.97□□□□□ -1.93
UPP2-IT1-201ENST00000439185 XGP55808 180 aa2.97□□□□□ -1.93
UPP2-IT1-201ENST00000439185 UBASH3AP57075 661 aa2.97□□□□□ -1.93
UPP2-IT1-201ENST00000439185 POU5F1Q01860 360 aaKnown RBP2.97□□□□□ -1.93
UPP2-IT1-201ENST00000439185 RASGEF1BQ0VAM2 473 aa2.97□□□□□ -1.93
UPP2-IT1-201ENST00000439185 ILF2Q12905 390 aaKnown RBP2.97□□□□□ -1.93
UPP2-IT1-201ENST00000439185 COG2Q14746 738 aa2.97□□□□□ -1.93
UPP2-IT1-201ENST00000439185 GPR33Q49SQ1 333 aa2.97□□□□□ -1.93
UPP2-IT1-201ENST00000439185 KRBOX4Q5JUW0 171 aa2.97□□□□□ -1.93
UPP2-IT1-201ENST00000439185 CCDC186Q7Z3E2 898 aa2.97□□□□□ -1.93
UPP2-IT1-201ENST00000439185 ZFAND4Q86XD8 727 aa2.97□□□□□ -1.93
UPP2-IT1-201ENST00000439185 KLHDC1Q8N7A1 406 aa2.97□□□□□ -1.93
UPP2-IT1-201ENST00000439185 KLHL30-AS1Q8NEE0 82 aa2.97□□□□□ -1.93
UPP2-IT1-201ENST00000439185 MRPS27Q92552 414 aaKnown RBP2.97□□□□□ -1.93
UPP2-IT1-201ENST00000439185 VPS33AQ96AX1 596 aa2.97□□□□□ -1.93
UPP2-IT1-201ENST00000439185 CNDP2Q96KP4 475 aaKnown RBP2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms