RNA–Protein interactions for RNA: ENST00000437983.2

SMAD9-IT1-201, SMAD9 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene SMAD9-IT1, Length 504 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-IT1-201ENST00000437983 EPOP01588 193 aa11.5□□□□□ -0.57
SMAD9-IT1-201ENST00000437983 ANXA5P08758 320 aa11.5□□□□□ -0.57
SMAD9-IT1-201ENST00000437983 ERVK-10P10266 1014 aa11.5□□□□□ -0.57
SMAD9-IT1-201ENST00000437983 FERP16591 822 aa11.5□□□□□ -0.57
SMAD9-IT1-201ENST00000437983 BMP7P18075 431 aa11.5□□□□□ -0.57
SMAD9-IT1-201ENST00000437983 NFKB1P19838 968 aa11.5□□□□□ -0.57
SMAD9-IT1-201ENST00000437983 EEF1GP26641 437 aaKnown RBP11.5□□□□□ -0.57
SMAD9-IT1-201ENST00000437983 PEX19P40855 299 aa11.5□□□□□ -0.57
SMAD9-IT1-201ENST00000437983 CYB561P49447 251 aa11.5□□□□□ -0.57
SMAD9-IT1-201ENST00000437983 ARF3P61204 181 aaPredicted RBP11.5□□□□□ -0.57
SMAD9-IT1-201ENST00000437983 MINDY4Q4G0A6 757 aa11.5□□□□□ -0.57
SMAD9-IT1-201ENST00000437983 PPP1R2P3Q6NXS1 205 aa11.5□□□□□ -0.57
SMAD9-IT1-201ENST00000437983 LRRC8BQ6P9F7 803 aa11.5□□□□□ -0.57
SMAD9-IT1-201ENST00000437983 PRSS57Q6UWY2 283 aa11.5□□□□□ -0.57
SMAD9-IT1-201ENST00000437983 RNF44Q7L0R7 432 aa11.5□□□□□ -0.57
SMAD9-IT1-201ENST00000437983 RPS19BP1Q86WX3 136 aaKnown RBP11.5□□□□□ -0.57
SMAD9-IT1-201ENST00000437983 ZFP62Q8NB50 900 aaPredicted RBP11.5□□□□□ -0.57
SMAD9-IT1-201ENST00000437983 IPMKQ8NFU5 416 aa11.5□□□□□ -0.57
SMAD9-IT1-201ENST00000437983 EPS8L3Q8TE67 593 aaKnown RBP11.5□□□□□ -0.57
SMAD9-IT1-201ENST00000437983 ELMO1Q92556 727 aa11.5□□□□□ -0.57
SMAD9-IT1-201ENST00000437983 RNASE6Q93091 150 aaKnown RBP11.5□□□□□ -0.57
SMAD9-IT1-201ENST00000437983 SLC22A18Q96BI1 424 aa11.5□□□□□ -0.57
SMAD9-IT1-201ENST00000437983 ULK4Q96C45 1275 aa11.5□□□□□ -0.57
SMAD9-IT1-201ENST00000437983 PERPQ96FX8 193 aa11.5□□□□□ -0.57
SMAD9-IT1-201ENST00000437983 TEKT5Q96M29 485 aa11.5□□□□□ -0.57
SMAD9-IT1-201ENST00000437983 ZNF830Q96NB3 372 aaPredicted RBP11.5□□□□□ -0.57
SMAD9-IT1-201ENST00000437983 FICDQ9BVA6 458 aa11.5□□□□□ -0.57
SMAD9-IT1-201ENST00000437983 TRIM45Q9H8W5 580 aaPredicted RBP11.5□□□□□ -0.57
SMAD9-IT1-201ENST00000437983 VPS37BQ9H9H4 285 aa11.5□□□□□ -0.57
SMAD9-IT1-201ENST00000437983 A0A0U1RQJ8 604 aa11.49□□□□□ -0.57
SMAD9-IT1-201ENST00000437983 SLC5A10A0PJK1 596 aa11.49□□□□□ -0.57
SMAD9-IT1-201ENST00000437983 PINLYPA6NC86 204 aa11.49□□□□□ -0.57
SMAD9-IT1-201ENST00000437983 MBD3L4A6NDZ8 208 aaPredicted RBP11.49□□□□□ -0.57
SMAD9-IT1-201ENST00000437983 TUBAL3A6NHL2 446 aa11.49□□□□□ -0.57
SMAD9-IT1-201ENST00000437983 MBD3L5A6NJ08 208 aaPredicted RBP11.49□□□□□ -0.57
SMAD9-IT1-201ENST00000437983 FAM166BA8MTA8 275 aa11.49□□□□□ -0.57
SMAD9-IT1-201ENST00000437983 KLRC4-KLRK1H3BQV0 150 aa11.49□□□□□ -0.57
SMAD9-IT1-201ENST00000437983 CLDN4O14493 209 aa11.49□□□□□ -0.57
SMAD9-IT1-201ENST00000437983 LIN7AO14910 233 aaPredicted RBP11.49□□□□□ -0.57
SMAD9-IT1-201ENST00000437983 PRPF4O43172 522 aaKnown RBP eCLIP11.49□□□□□ -0.57
SMAD9-IT1-201ENST00000437983 CNOT4O95628 575 aaKnown RBP11.49□□□□□ -0.57
SMAD9-IT1-201ENST00000437983 AGTP01019 485 aa11.49□□□□□ -0.57
SMAD9-IT1-201ENST00000437983 CSE1LP55060 971 aaKnown RBP11.49□□□□□ -0.57
SMAD9-IT1-201ENST00000437983 TAF1AQ15573 450 aaPredicted RBP11.49□□□□□ -0.57
SMAD9-IT1-201ENST00000437983 EXT1Q16394 746 aa11.49□□□□□ -0.57
SMAD9-IT1-201ENST00000437983 DPCR1Q3MIW9 517 aa11.49□□□□□ -0.57
SMAD9-IT1-201ENST00000437983 FKBP15Q5T1M5 1219 aa11.49□□□□□ -0.57
SMAD9-IT1-201ENST00000437983 C10orf62Q5T681 223 aaPredicted RBP11.49□□□□□ -0.57
SMAD9-IT1-201ENST00000437983 PAPD4Q6PIY7 484 aaKnown RBP11.49□□□□□ -0.57
SMAD9-IT1-201ENST00000437983 ZNF571Q7Z3V5 609 aaPredicted RBP11.49□□□□□ -0.57
SMAD9-IT1-201ENST00000437983 SNX20Q7Z614 316 aa11.49□□□□□ -0.57
SMAD9-IT1-201ENST00000437983 SERPINA9Q86WD7 417 aa11.49□□□□□ -0.57
SMAD9-IT1-201ENST00000437983 ARHGEF39Q8N4T4 335 aa11.49□□□□□ -0.57
SMAD9-IT1-201ENST00000437983 OR2L8Q8NGY9 312 aa11.49□□□□□ -0.57
SMAD9-IT1-201ENST00000437983 HEXDCQ8WVB3 486 aa11.49□□□□□ -0.57
SMAD9-IT1-201ENST00000437983 KIAA1191Q96A73 305 aa11.49□□□□□ -0.57
SMAD9-IT1-201ENST00000437983 MVB12AQ96EY5 273 aa11.49□□□□□ -0.57
SMAD9-IT1-201ENST00000437983 RNF157Q96PX1 679 aa11.49□□□□□ -0.57
SMAD9-IT1-201ENST00000437983 CNPPD1Q9BV87 410 aa11.49□□□□□ -0.57
SMAD9-IT1-201ENST00000437983 C12orf49Q9H741 205 aa11.49□□□□□ -0.57
SMAD9-IT1-201ENST00000437983 CHMP5Q9NZZ3 219 aa11.49□□□□□ -0.57
SMAD9-IT1-201ENST00000437983 ADGRE2Q9UHX3 823 aa11.49□□□□□ -0.57
SMAD9-IT1-201ENST00000437983 KLF13Q9Y2Y9 288 aaPredicted RBP11.49□□□□□ -0.57
SMAD9-IT1-201ENST00000437983 KRT87PA6NCN2 255 aa11.48□□□□□ -0.57
SMAD9-IT1-201ENST00000437983 FIGNL2A6NMB9 653 aa11.48□□□□□ -0.57
SMAD9-IT1-201ENST00000437983 C2orf81A6NN90 581 aa11.48□□□□□ -0.57
SMAD9-IT1-201ENST00000437983 ARHGEF33A8MVX0 844 aa11.48□□□□□ -0.57
SMAD9-IT1-201ENST00000437983 DNAJB6O75190 326 aa11.48□□□□□ -0.57
SMAD9-IT1-201ENST00000437983 SIX3O95343 332 aaPredicted RBP11.48□□□□□ -0.57
SMAD9-IT1-201ENST00000437983 ITGALP20701 1170 aa11.48□□□□□ -0.57
SMAD9-IT1-201ENST00000437983 ACRV1P26436 265 aa11.48□□□□□ -0.57
SMAD9-IT1-201ENST00000437983 HLCSP50747 726 aa11.48□□□□□ -0.57
SMAD9-IT1-201ENST00000437983 TAS2R40P59535 323 aa11.48□□□□□ -0.57
SMAD9-IT1-201ENST00000437983 PDK2Q15119 407 aa11.48□□□□□ -0.57
SMAD9-IT1-201ENST00000437983 HADHQ16836 314 aaKnown RBP11.48□□□□□ -0.57
SMAD9-IT1-201ENST00000437983 SFT2D3Q587I9 215 aa11.48□□□□□ -0.57
SMAD9-IT1-201ENST00000437983 CATSPEREQ5SY80 951 aa11.48□□□□□ -0.57
SMAD9-IT1-201ENST00000437983 MDGA2Q7Z553 956 aa11.48□□□□□ -0.57
SMAD9-IT1-201ENST00000437983 VRK3Q8IV63 474 aa11.48□□□□□ -0.57
SMAD9-IT1-201ENST00000437983 CSNK1A1LQ8N752 337 aa11.48□□□□□ -0.57
SMAD9-IT1-201ENST00000437983 CFAP61Q8NHU2 1237 aa11.48□□□□□ -0.57
SMAD9-IT1-201ENST00000437983 RAPGEF5Q92565 580 aa11.48□□□□□ -0.57
SMAD9-IT1-201ENST00000437983 OLFM3Q96PB7 478 aa11.48□□□□□ -0.57
SMAD9-IT1-201ENST00000437983 SMC6Q96SB8 1091 aa11.48□□□□□ -0.57
SMAD9-IT1-201ENST00000437983 YIPF4Q9BSR8 244 aa11.48□□□□□ -0.57
SMAD9-IT1-201ENST00000437983 HAUS4Q9H6D7 363 aa11.48□□□□□ -0.57
SMAD9-IT1-201ENST00000437983 DEPPQ9NTK1 212 aa11.48□□□□□ -0.57
SMAD9-IT1-201ENST00000437983 TRMT1Q9NXH9 659 aaKnown RBP11.48□□□□□ -0.57
SMAD9-IT1-201ENST00000437983 ALKBH4Q9NXW9 302 aa11.48□□□□□ -0.57
SMAD9-IT1-201ENST00000437983 C19orf25Q9UFG5 118 aaPredicted RBP11.48□□□□□ -0.57
SMAD9-IT1-201ENST00000437983 IP6K2Q9UHH9 426 aa11.48□□□□□ -0.57
SMAD9-IT1-201ENST00000437983 ANAPC7Q9UJX3 599 aa11.48□□□□□ -0.57
SMAD9-IT1-201ENST00000437983 KDM1AO60341 852 aa11.47□□□□□ -0.57
SMAD9-IT1-201ENST00000437983 GZMAP12544 262 aa11.47□□□□□ -0.57
SMAD9-IT1-201ENST00000437983 EPB42P16452 691 aa11.47□□□□□ -0.57
SMAD9-IT1-201ENST00000437983 BMP5P22003 454 aa11.47□□□□□ -0.57
SMAD9-IT1-201ENST00000437983 MC4RP32245 332 aa11.47□□□□□ -0.57
SMAD9-IT1-201ENST00000437983 ASCL1P50553 236 aa11.47□□□□□ -0.57
SMAD9-IT1-201ENST00000437983 MLF1P58340 268 aa11.47□□□□□ -0.57
SMAD9-IT1-201ENST00000437983 TAS2R50P59544 299 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms