RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 HORMAD1Q86X24 394 aa24.73■■□□□ 1.55
CPNE1-216ENST00000437340 FAM129CQ86XR2 697 aa24.73■■□□□ 1.55
CPNE1-216ENST00000437340 EPHX4Q8IUS5 362 aa24.73■■□□□ 1.55
CPNE1-216ENST00000437340 DEFB123Q8N688 67 aa24.73■■□□□ 1.55
CPNE1-216ENST00000437340 PANX1Q96RD7 426 aa24.73■■□□□ 1.55
CPNE1-216ENST00000437340 CENPKQ9BS16 269 aa24.73■■□□□ 1.55
CPNE1-216ENST00000437340 BDH2Q9BUT1 245 aa24.73■■□□□ 1.55
CPNE1-216ENST00000437340 TRPV5Q9NQA5 729 aa24.73■■□□□ 1.55
CPNE1-216ENST00000437340 ADGRE2Q9UHX3 823 aa24.73■■□□□ 1.55
CPNE1-216ENST00000437340 SLC17A4Q9Y2C5 497 aa24.73■■□□□ 1.55
CPNE1-216ENST00000437340 A0A1W2PQF6 199 aa24.72■■□□□ 1.55
CPNE1-216ENST00000437340 EVPLLA8MZ36 301 aa24.72■■□□□ 1.55
CPNE1-216ENST00000437340 FPGTO14772 594 aa24.72■■□□□ 1.55
CPNE1-216ENST00000437340 PCDH7O60245 1069 aa24.72■■□□□ 1.55
CPNE1-216ENST00000437340 ADAM23O75077 832 aa24.72■■□□□ 1.55
CPNE1-216ENST00000437340 GSNP06396 782 aa24.72■■□□□ 1.55
CPNE1-216ENST00000437340 HOXB2P14652 356 aa24.72■■□□□ 1.55
CPNE1-216ENST00000437340 ADPRHP54922 357 aa24.72■■□□□ 1.55
CPNE1-216ENST00000437340 CHRNB3Q05901 458 aa24.72■■□□□ 1.55
CPNE1-216ENST00000437340 CPTPQ5TA50 214 aa24.72■■□□□ 1.55
CPNE1-216ENST00000437340 ANXA8L1Q5VT79 327 aa24.72■■□□□ 1.55
CPNE1-216ENST00000437340 GPR153Q6NV75 609 aa24.72■■□□□ 1.55
CPNE1-216ENST00000437340 SERPINA11Q86U17 422 aa24.72■■□□□ 1.55
CPNE1-216ENST00000437340 CHERPQ8IWX8 916 aaKnown RBP24.72■■□□□ 1.55
CPNE1-216ENST00000437340 CBR4Q8N4T8 237 aa24.72■■□□□ 1.55
CPNE1-216ENST00000437340 LMNTD1Q8N9Z9 388 aa24.72■■□□□ 1.55
CPNE1-216ENST00000437340 VPS37AQ8NEZ2 397 aa24.72■■□□□ 1.55
CPNE1-216ENST00000437340 MIEF2Q96C03 454 aa24.72■■□□□ 1.55
CPNE1-216ENST00000437340 COQ8BQ96D53 544 aa24.72■■□□□ 1.55
CPNE1-216ENST00000437340 AURKBQ96GD4 344 aaPredicted RBP24.72■■□□□ 1.55
CPNE1-216ENST00000437340 CNBD2Q96M20 576 aa24.72■■□□□ 1.55
CPNE1-216ENST00000437340 TBCDQ9BTW9 1192 aa24.72■■□□□ 1.55
CPNE1-216ENST00000437340 DUSP26Q9BV47 211 aa24.72■■□□□ 1.55
CPNE1-216ENST00000437340 CXorf56Q9H5V9 222 aa24.72■■□□□ 1.55
CPNE1-216ENST00000437340 PELI2Q9HAT8 420 aa24.72■■□□□ 1.55
CPNE1-216ENST00000437340 BTNL2Q9UIR0 455 aa24.72■■□□□ 1.55
CPNE1-216ENST00000437340 PLAGL1Q9UM63 463 aa24.72■■□□□ 1.55
CPNE1-216ENST00000437340 AK5Q9Y6K8 562 aa24.72■■□□□ 1.55
CPNE1-216ENST00000437340 RASAL1O95294 804 aa24.72■■□□□ 1.55
CPNE1-216ENST00000437340 IL1RNP18510 177 aa24.72■■□□□ 1.55
CPNE1-216ENST00000437340 CLCNKAP51800 687 aa24.72■■□□□ 1.55
CPNE1-216ENST00000437340 TMIGD1Q6UXZ0 262 aa24.72■■□□□ 1.55
CPNE1-216ENST00000437340 C17orf64Q86WR6 236 aa24.72■■□□□ 1.55
CPNE1-216ENST00000437340 SLC44A3Q8N4M1 653 aa24.72■■□□□ 1.55
CPNE1-216ENST00000437340 GPR156Q8NFN8 814 aa24.72■■□□□ 1.55
CPNE1-216ENST00000437340 ASB12Q8WXK4 309 aa24.72■■□□□ 1.55
CPNE1-216ENST00000437340 SMPDL3AQ92484 453 aa24.72■■□□□ 1.55
CPNE1-216ENST00000437340 KLK6Q92876 244 aa24.72■■□□□ 1.55
CPNE1-216ENST00000437340 MENTQ9BUN1 341 aa24.72■■□□□ 1.55
CPNE1-216ENST00000437340 FZD4Q9ULV1 537 aa24.72■■□□□ 1.55
CPNE1-216ENST00000437340 ATG2BQ96BY7 2078 aa24.71■■□□□ 1.55
CPNE1-216ENST00000437340 PCM1Q15154 2024 aa24.71■■□□□ 1.55
CPNE1-216ENST00000437340 GNG14A0A1W2PPG7 69 aa24.71■■□□□ 1.55
CPNE1-216ENST00000437340 ARHGAP10A1A4S6 786 aa24.71■■□□□ 1.55
CPNE1-216ENST00000437340 B3GALT4O96024 378 aa24.71■■□□□ 1.55
CPNE1-216ENST00000437340 EGFP01133 1207 aa24.71■■□□□ 1.55
CPNE1-216ENST00000437340 LAMP1P11279 417 aa24.71■■□□□ 1.55
CPNE1-216ENST00000437340 ZNF763Q0D2J5 394 aa24.71■■□□□ 1.55
CPNE1-216ENST00000437340 SF1Q15637 639 aaKnown RBP24.71■■□□□ 1.55
CPNE1-216ENST00000437340 SMAD2Q15796 467 aaKnown RBP24.71■■□□□ 1.55
CPNE1-216ENST00000437340 NHSL2Q5HYW2 709 aa24.71■■□□□ 1.55
CPNE1-216ENST00000437340 FKBP9P1Q75LS8 142 aa24.71■■□□□ 1.55
CPNE1-216ENST00000437340 CHST15Q7LFX5 561 aaPredicted RBP24.71■■□□□ 1.55
CPNE1-216ENST00000437340 RAB42Q8N4Z0 105 aa24.71■■□□□ 1.55
CPNE1-216ENST00000437340 CDC26Q8NHZ8 85 aa24.71■■□□□ 1.55
CPNE1-216ENST00000437340 PUM2Q8TB72 1066 aaKnown RBP eCLIP24.71■■□□□ 1.558e-8■■■■■ 32.7
CPNE1-216ENST00000437340 FAM162AQ96A26 154 aa24.71■■□□□ 1.55
CPNE1-216ENST00000437340 PHF12Q96QT6 1004 aa24.71■■□□□ 1.55
CPNE1-216ENST00000437340 SPNS1Q9H2V7 528 aa24.71■■□□□ 1.55
CPNE1-216ENST00000437340 OLAHQ9NV23 265 aa24.71■■□□□ 1.55
CPNE1-216ENST00000437340 ATP6V1HQ9UI12 483 aa24.71■■□□□ 1.55
CPNE1-216ENST00000437340 ZNF639Q9UID6 485 aa24.71■■□□□ 1.55
CPNE1-216ENST00000437340 OAZ3Q9UMX2 235 aa24.71■■□□□ 1.55
CPNE1-216ENST00000437340 NUMA1Q14980 2115 aa24.71■■□□□ 1.55
CPNE1-216ENST00000437340 GABRR3A8MPY1 467 aa24.7■■□□□ 1.55
CPNE1-216ENST00000437340 ACOX3O15254 700 aa24.7■■□□□ 1.55
CPNE1-216ENST00000437340 CLOCKO15516 846 aa24.7■■□□□ 1.55
CPNE1-216ENST00000437340 CREG1O75629 220 aa24.7■■□□□ 1.55
CPNE1-216ENST00000437340 EPN2O95208 641 aa24.7■■□□□ 1.55
CPNE1-216ENST00000437340 KLF8O95600 359 aaPredicted RBP24.7■■□□□ 1.55
CPNE1-216ENST00000437340 CEACAM5P06731 702 aa24.7■■□□□ 1.55
CPNE1-216ENST00000437340 ASGR2P07307 311 aa24.7■■□□□ 1.55
CPNE1-216ENST00000437340 DRD1P21728 446 aa24.7■■□□□ 1.55
CPNE1-216ENST00000437340 IDSP22304 550 aa24.7■■□□□ 1.55
CPNE1-216ENST00000437340 CXCR2P25025 360 aa24.7■■□□□ 1.55
CPNE1-216ENST00000437340 PTX3P26022 381 aaPredicted RBP24.7■■□□□ 1.55
CPNE1-216ENST00000437340 CTBSQ01459 385 aa24.7■■□□□ 1.55
CPNE1-216ENST00000437340 HKDC1Q2TB90 917 aa24.7■■□□□ 1.55
CPNE1-216ENST00000437340 ARMCX6Q7L4S7 300 aa24.7■■□□□ 1.55
CPNE1-216ENST00000437340 COMMD6Q7Z4G1 85 aa24.7■■□□□ 1.55
CPNE1-216ENST00000437340 METTL4Q8N3J2 472 aa24.7■■□□□ 1.55
CPNE1-216ENST00000437340 WASH6PQ9NQA3 447 aa24.7■■□□□ 1.55
CPNE1-216ENST00000437340 DCAF13Q9NV06 445 aaKnown RBP24.7■■□□□ 1.55
CPNE1-216ENST00000437340 GMEB1Q9Y692 573 aa24.7■■□□□ 1.55
CPNE1-216ENST00000437340 RNF103-CHMP3A0A140T963 221 aa24.7■■□□□ 1.54
CPNE1-216ENST00000437340 CLIC1O00299 241 aa24.7■■□□□ 1.54
CPNE1-216ENST00000437340 SH3BGRLO75368 114 aa24.7■■□□□ 1.54
CPNE1-216ENST00000437340 DEAF1O75398 565 aaPredicted RBP24.7■■□□□ 1.54
CPNE1-216ENST00000437340 PRSS23O95084 383 aa24.7■■□□□ 1.54
CPNE1-216ENST00000437340 TNFAIP8O95379 198 aa24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms