RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 SPG21Q9NZD8 308 aa11.4□□□□□ -0.58
CD44-209ENST00000433892 ZSCAN9O15535 394 aaPredicted RBP11.39□□□□□ -0.59
CD44-209ENST00000433892 TSPAN6O43657 245 aa11.39□□□□□ -0.59
CD44-209ENST00000433892 UGDHO60701 494 aa11.39□□□□□ -0.59
CD44-209ENST00000433892 WBP4O75554 376 aaKnown RBP11.39□□□□□ -0.59
CD44-209ENST00000433892 SLCO2B1O94956 709 aa11.39□□□□□ -0.59
CD44-209ENST00000433892 ABCB1P08183 1280 aaPredicted RBP11.39□□□□□ -0.59
CD44-209ENST00000433892 GSTM1P09488 218 aa11.39□□□□□ -0.59
CD44-209ENST00000433892 PCSK2P16519 638 aa11.39□□□□□ -0.59
CD44-209ENST00000433892 GAB1Q13480 694 aa11.39□□□□□ -0.59
CD44-209ENST00000433892 CAMK2GQ13555 558 aaPredicted RBP11.39□□□□□ -0.59
CD44-209ENST00000433892 VEZF1Q14119 521 aa11.39□□□□□ -0.59
CD44-209ENST00000433892 TRIM16LQ309B1 348 aa11.39□□□□□ -0.59
CD44-209ENST00000433892 IQCCQ4KMZ1 466 aa11.39□□□□□ -0.59
CD44-209ENST00000433892 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.39□□□□□ -0.59
CD44-209ENST00000433892 TMEM236Q5W0B7 351 aa11.39□□□□□ -0.59
CD44-209ENST00000433892 FAHD1Q6P587 224 aa11.39□□□□□ -0.59
CD44-209ENST00000433892 Q6ZPB1 254 aaPredicted RBP11.39□□□□□ -0.59
CD44-209ENST00000433892 AHSA2Q719I0 299 aa11.39□□□□□ -0.59
CD44-209ENST00000433892 RPL3LQ92901 407 aaKnown RBP11.39□□□□□ -0.59
CD44-209ENST00000433892 C11orf24Q96F05 449 aaPredicted RBP11.39□□□□□ -0.59
CD44-209ENST00000433892 MAGEB10Q96LZ2 347 aaPredicted RBP11.39□□□□□ -0.59
CD44-209ENST00000433892 RIOK2Q9BVS4 552 aaKnown RBP11.39□□□□□ -0.59
CD44-209ENST00000433892 RUBCNLQ9H714 662 aa11.39□□□□□ -0.59
CD44-209ENST00000433892 AKIP1Q9NQ31 210 aa11.39□□□□□ -0.59
CD44-209ENST00000433892 NECTIN3Q9NQS3 549 aa11.39□□□□□ -0.59
CD44-209ENST00000433892 CREBZFQ9NS37 354 aa11.39□□□□□ -0.59
CD44-209ENST00000433892 TRNAU1APQ9NX07 287 aaKnown RBP11.39□□□□□ -0.59
CD44-209ENST00000433892 STOX2Q9P2F5 926 aaPredicted RBP11.39□□□□□ -0.59
CD44-209ENST00000433892 ZNF451Q9Y4E5 1061 aa11.39□□□□□ -0.59
CD44-209ENST00000433892 PMF1-BGLAPU3KQ54 211 aa11.39□□□□□ -0.59
CD44-209ENST00000433892 C5orf42Q9H799 3197 aa11.39□□□□□ -0.59
CD44-209ENST00000433892 COL4A6Q14031 1691 aa11.39□□□□□ -0.59
CD44-209ENST00000433892 FADS2P1A8MWK0 482 aa11.39□□□□□ -0.59
CD44-209ENST00000433892 SUV39H1O43463 412 aa11.39□□□□□ -0.59
CD44-209ENST00000433892 MYO1DO94832 1006 aa11.39□□□□□ -0.59
CD44-209ENST00000433892 SLC16A8O95907 504 aa11.39□□□□□ -0.59
CD44-209ENST00000433892 C9P02748 559 aa11.39□□□□□ -0.59
CD44-209ENST00000433892 LRG1P02750 347 aa11.39□□□□□ -0.59
CD44-209ENST00000433892 LCKP06239 509 aa11.39□□□□□ -0.59
CD44-209ENST00000433892 PORP16435 677 aaPredicted RBP11.39□□□□□ -0.59
CD44-209ENST00000433892 TGFBR1P36897 503 aa11.39□□□□□ -0.59
CD44-209ENST00000433892 BDKRB1P46663 353 aa11.39□□□□□ -0.59
CD44-209ENST00000433892 CTSCP53634 463 aa11.39□□□□□ -0.59
CD44-209ENST00000433892 KCNJ10P78508 379 aa11.39□□□□□ -0.59
CD44-209ENST00000433892 KCNC4Q03721 635 aa11.39□□□□□ -0.59
CD44-209ENST00000433892 RGNQ15493 299 aa11.39□□□□□ -0.59
CD44-209ENST00000433892 POM121L1PQ3SYA9 428 aa11.39□□□□□ -0.59
CD44-209ENST00000433892 SYTL3Q4VX76 610 aa11.39□□□□□ -0.59
CD44-209ENST00000433892 PAGE2BQ5JRK9 111 aa11.39□□□□□ -0.59
CD44-209ENST00000433892 GPR153Q6NV75 609 aa11.39□□□□□ -0.59
CD44-209ENST00000433892 NIPAL1Q6NVV3 410 aa11.39□□□□□ -0.59
CD44-209ENST00000433892 ANGPTL8Q6UXH0 198 aa11.39□□□□□ -0.59
CD44-209ENST00000433892 NEK10Q6ZWH5 1172 aa11.39□□□□□ -0.59
CD44-209ENST00000433892 DDX53Q86TM3 631 aaKnown RBP11.39□□□□□ -0.59
CD44-209ENST00000433892 NAGSQ8N159 534 aa11.39□□□□□ -0.59
CD44-209ENST00000433892 SLAIN1Q8ND83 568 aa11.39□□□□□ -0.59
CD44-209ENST00000433892 VMP1Q96GC9 406 aa11.39□□□□□ -0.59
CD44-209ENST00000433892 ZNF300Q96RE9 604 aaPredicted RBP11.39□□□□□ -0.59
CD44-209ENST00000433892 CORO1BQ9BR76 489 aa11.39□□□□□ -0.59
CD44-209ENST00000433892 SH3BP4Q9P0V3 963 aa11.39□□□□□ -0.59
CD44-209ENST00000433892 PCDH10Q9P2E7 1040 aa11.39□□□□□ -0.59
CD44-209ENST00000433892 DAPK2Q9UIK4 370 aa11.39□□□□□ -0.59
CD44-209ENST00000433892 DOCK6Q96HP0 2047 aa11.39□□□□□ -0.59
CD44-209ENST00000433892 GNG14A0A1W2PPG7 69 aa11.38□□□□□ -0.59
CD44-209ENST00000433892 C1orf226A1L170 272 aa11.38□□□□□ -0.59
CD44-209ENST00000433892 TMEM247A6NEH6 219 aa11.38□□□□□ -0.59
CD44-209ENST00000433892 MGAT4DA6NG13 374 aa11.38□□□□□ -0.59
CD44-209ENST00000433892 ZBBXA8MT70 800 aa11.38□□□□□ -0.59
CD44-209ENST00000433892 H0YIV9 168 aa11.38□□□□□ -0.59
CD44-209ENST00000433892 PSIP1O75475 530 aaKnown RBP11.38□□□□□ -0.59
CD44-209ENST00000433892 VIPP01282 170 aa11.38□□□□□ -0.59
CD44-209ENST00000433892 IMPDH2P12268 514 aa11.38□□□□□ -0.59
CD44-209ENST00000433892 TNFRSF1BP20333 461 aa11.38□□□□□ -0.59
CD44-209ENST00000433892 CDH3P22223 829 aa11.38□□□□□ -0.59
CD44-209ENST00000433892 RRM2P31350 389 aa11.38□□□□□ -0.59
CD44-209ENST00000433892 HPCAL1P37235 193 aa11.38□□□□□ -0.59
CD44-209ENST00000433892 KCNC3Q14003 757 aa11.38□□□□□ -0.59
CD44-209ENST00000433892 DGUOKQ16854 277 aa11.38□□□□□ -0.59
CD44-209ENST00000433892 PROX2Q3B8N5 592 aa11.38□□□□□ -0.59
CD44-209ENST00000433892 GRHL2Q6ISB3 625 aa11.38□□□□□ -0.59
CD44-209ENST00000433892 ADCK1Q86TW2 530 aa11.38□□□□□ -0.59
CD44-209ENST00000433892 RASGRP3Q8IV61 690 aa11.38□□□□□ -0.59
CD44-209ENST00000433892 RAVER1Q8IY67 606 aaKnown RBP11.38□□□□□ -0.59
CD44-209ENST00000433892 ENTHD1Q8IYW4 607 aa11.38□□□□□ -0.59
CD44-209ENST00000433892 SVOPQ8N4V2 548 aa11.38□□□□□ -0.59
CD44-209ENST00000433892 OR7G3Q8NG95 312 aa11.38□□□□□ -0.59
CD44-209ENST00000433892 HUS1BQ8NHY5 278 aa11.38□□□□□ -0.59
CD44-209ENST00000433892 SPPL2AQ8TCT8 520 aa11.38□□□□□ -0.59
CD44-209ENST00000433892 APH1BQ8WW43 257 aa11.38□□□□□ -0.59
CD44-209ENST00000433892 SORCS1Q8WY21 1168 aa11.38□□□□□ -0.59
CD44-209ENST00000433892 ITFG2Q969R8 447 aa11.38□□□□□ -0.59
CD44-209ENST00000433892 FAM210AQ96ND0 272 aa11.38□□□□□ -0.59
CD44-209ENST00000433892 KCNC2Q96PR1 638 aa11.38□□□□□ -0.59
CD44-209ENST00000433892 ALPK1Q96QP1 1244 aa11.38□□□□□ -0.59
CD44-209ENST00000433892 BCL7BQ9BQE9 202 aa11.38□□□□□ -0.59
CD44-209ENST00000433892 NEURL2Q9BR09 285 aa11.38□□□□□ -0.59
CD44-209ENST00000433892 CEP44Q9C0F1 390 aa11.38□□□□□ -0.59
CD44-209ENST00000433892 WDR12Q9GZL7 423 aaKnown RBP11.38□□□□□ -0.59
CD44-209ENST00000433892 CHST8Q9H2A9 424 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms