RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 KCNK5O95279 499 aa11.18□□□□□ -0.62
HMGCS1-202ENST00000433297 ERP29P30040 261 aaKnown RBP11.18□□□□□ -0.62
HMGCS1-202ENST00000433297 MAPK12P53778 367 aa11.18□□□□□ -0.62
HMGCS1-202ENST00000433297 SPIBQ01892 262 aa11.18□□□□□ -0.62
HMGCS1-202ENST00000433297 HYAL2Q12891 473 aa11.18□□□□□ -0.62
HMGCS1-202ENST00000433297 KLHL17Q6TDP4 642 aa11.18□□□□□ -0.62
HMGCS1-202ENST00000433297 KRT73Q86Y46 540 aa11.18□□□□□ -0.62
HMGCS1-202ENST00000433297 SPATA2LQ8IUW3 424 aaPredicted RBP11.18□□□□□ -0.62
HMGCS1-202ENST00000433297 VWA5B2Q8N398 1253 aa11.18□□□□□ -0.62
HMGCS1-202ENST00000433297 RNF175Q8N4F7 328 aa11.18□□□□□ -0.62
HMGCS1-202ENST00000433297 OR9Q2Q8NGE9 314 aa11.18□□□□□ -0.62
HMGCS1-202ENST00000433297 SKA2Q8WVK7 121 aaPredicted RBP11.18□□□□□ -0.62
HMGCS1-202ENST00000433297 MTERF3Q96E29 417 aa11.18□□□□□ -0.62
HMGCS1-202ENST00000433297 SERPINB11Q96P15 392 aa11.18□□□□□ -0.62
HMGCS1-202ENST00000433297 FAM83DQ9H4H8 585 aa11.18□□□□□ -0.62
HMGCS1-202ENST00000433297 CSNK1G1Q9HCP0 422 aa11.18□□□□□ -0.62
HMGCS1-202ENST00000433297 C12orf4Q9NQ89 552 aa11.18□□□□□ -0.62
HMGCS1-202ENST00000433297 ABI2Q9NYB9 513 aaPredicted RBP11.18□□□□□ -0.62
HMGCS1-202ENST00000433297 PPT2Q9UMR5 302 aa11.18□□□□□ -0.62
HMGCS1-202ENST00000433297 PCDHGB3Q9Y5G1 929 aa11.18□□□□□ -0.62
HMGCS1-202ENST00000433297 A0A0B4J293 547 aa11.17□□□□□ -0.62
HMGCS1-202ENST00000433297 MANBAO00462 879 aa11.17□□□□□ -0.62
HMGCS1-202ENST00000433297 TAPBPO15533 448 aa11.17□□□□□ -0.62
HMGCS1-202ENST00000433297 CDRT1O95170 752 aa11.17□□□□□ -0.62
HMGCS1-202ENST00000433297 SMIM10L2AP0DMW4 78 aa11.17□□□□□ -0.62
HMGCS1-202ENST00000433297 SMIM10L2BP0DMW5 78 aa11.17□□□□□ -0.62
HMGCS1-202ENST00000433297 KIR2DL3P43628 341 aa11.17□□□□□ -0.62
HMGCS1-202ENST00000433297 RGRP47804 291 aa11.17□□□□□ -0.62
HMGCS1-202ENST00000433297 KCNQ1P51787 676 aa11.17□□□□□ -0.62
HMGCS1-202ENST00000433297 PCBP2Q15366 365 aaKnown RBP eCLIP11.17□□□□□ -0.623e-7■■■■■ 36.2
HMGCS1-202ENST00000433297 SF1Q15637 639 aaKnown RBP11.17□□□□□ -0.62
HMGCS1-202ENST00000433297 TATDN3Q17R31 274 aa11.17□□□□□ -0.62
HMGCS1-202ENST00000433297 SLC39A12Q504Y0 691 aa11.17□□□□□ -0.62
HMGCS1-202ENST00000433297 FAHD1Q6P587 224 aa11.17□□□□□ -0.62
HMGCS1-202ENST00000433297 PTCHD4Q6ZW05 846 aa11.17□□□□□ -0.62
HMGCS1-202ENST00000433297 ADAMTSL2Q86TH1 951 aa11.17□□□□□ -0.62
HMGCS1-202ENST00000433297 CLECL1Q8IZS7 167 aa11.17□□□□□ -0.62
HMGCS1-202ENST00000433297 RNF31Q96EP0 1072 aa11.17□□□□□ -0.62
HMGCS1-202ENST00000433297 SRRQ9GZT4 340 aa11.17□□□□□ -0.62
HMGCS1-202ENST00000433297 MROH8Q9H579 483 aa11.17□□□□□ -0.62
HMGCS1-202ENST00000433297 PDYNP01213 254 aa11.17□□□□□ -0.62
HMGCS1-202ENST00000433297 ADRA2AP08913 450 aa11.17□□□□□ -0.62
HMGCS1-202ENST00000433297 EPB42P16452 691 aa11.17□□□□□ -0.62
HMGCS1-202ENST00000433297 LPOP22079 712 aaPredicted RBP11.17□□□□□ -0.62
HMGCS1-202ENST00000433297 PKLRP30613 574 aa11.17□□□□□ -0.62
HMGCS1-202ENST00000433297 ETV6P41212 452 aa11.17□□□□□ -0.62
HMGCS1-202ENST00000433297 ZNF140P52738 457 aaPredicted RBP11.17□□□□□ -0.62
HMGCS1-202ENST00000433297 PPIGQ13427 754 aaKnown RBP eCLIP11.17□□□□□ -0.62
HMGCS1-202ENST00000433297 DOC2BQ14184 412 aa11.17□□□□□ -0.62
HMGCS1-202ENST00000433297 DSC3Q14574 896 aa11.17□□□□□ -0.62
HMGCS1-202ENST00000433297 ARHGEF6Q15052 776 aa11.17□□□□□ -0.62
HMGCS1-202ENST00000433297 SSX1Q16384 188 aa11.17□□□□□ -0.62
HMGCS1-202ENST00000433297 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.17□□□□□ -0.62
HMGCS1-202ENST00000433297 SBSNQ6UWP8 590 aa11.17□□□□□ -0.62
HMGCS1-202ENST00000433297 ABI3BPQ7Z7G0 1075 aa11.17□□□□□ -0.62
HMGCS1-202ENST00000433297 ZFAND1Q8TCF1 268 aa11.17□□□□□ -0.62
HMGCS1-202ENST00000433297 GDF15Q99988 308 aa11.17□□□□□ -0.62
HMGCS1-202ENST00000433297 RTP3Q9BQQ7 232 aa11.17□□□□□ -0.62
HMGCS1-202ENST00000433297 TRIM62Q9BVG3 475 aa11.17□□□□□ -0.62
HMGCS1-202ENST00000433297 ACPTQ9BZG2 426 aa11.17□□□□□ -0.62
HMGCS1-202ENST00000433297 ABHD16BQ9H3Z7 469 aa11.17□□□□□ -0.62
HMGCS1-202ENST00000433297 ELOVL6Q9H5J4 265 aa11.17□□□□□ -0.62
HMGCS1-202ENST00000433297 TRIM45Q9H8W5 580 aaPredicted RBP11.17□□□□□ -0.62
HMGCS1-202ENST00000433297 ZNF556Q9HAH1 456 aa11.17□□□□□ -0.62
HMGCS1-202ENST00000433297 CMAHPQ9Y471 501 aa11.17□□□□□ -0.62
HMGCS1-202ENST00000433297 A0A1W2PQL4 384 aaPredicted RBP11.17□□□□□ -0.62
HMGCS1-202ENST00000433297 CYP17A1P05093 508 aa11.17□□□□□ -0.62
HMGCS1-202ENST00000433297 MMP3P08254 477 aa11.17□□□□□ -0.62
HMGCS1-202ENST00000433297 PSMA1P25786 263 aaKnown RBP11.17□□□□□ -0.62
HMGCS1-202ENST00000433297 PTGS2P35354 604 aa11.17□□□□□ -0.62
HMGCS1-202ENST00000433297 KIR3DL1P43629 444 aa11.17□□□□□ -0.62
HMGCS1-202ENST00000433297 RPS5P46782 204 aaKnown RBP11.17□□□□□ -0.62
HMGCS1-202ENST00000433297 ITGA1P56199 1179 aa11.17□□□□□ -0.62
HMGCS1-202ENST00000433297 CYP4F8P98187 520 aa11.17□□□□□ -0.62
HMGCS1-202ENST00000433297 IL10RBQ08334 325 aa11.17□□□□□ -0.62
HMGCS1-202ENST00000433297 GPR65Q8IYL9 337 aa11.17□□□□□ -0.62
HMGCS1-202ENST00000433297 OR7D4Q8NG98 312 aa11.17□□□□□ -0.62
HMGCS1-202ENST00000433297 OR10T2Q8NGX3 314 aa11.17□□□□□ -0.62
HMGCS1-202ENST00000433297 LRRC20Q8TCA0 184 aa11.17□□□□□ -0.62
HMGCS1-202ENST00000433297 TRMT61AQ96FX7 289 aaKnown RBP11.17□□□□□ -0.62
HMGCS1-202ENST00000433297 CRELD1Q96HD1 420 aa11.17□□□□□ -0.62
HMGCS1-202ENST00000433297 TTLL2Q9BWV7 592 aa11.17□□□□□ -0.62
HMGCS1-202ENST00000433297 CRISPLD1Q9H336 500 aa11.17□□□□□ -0.62
HMGCS1-202ENST00000433297 TLR8Q9NR97 1041 aaKnown RBP11.17□□□□□ -0.62
HMGCS1-202ENST00000433297 NYNRINQ9P2P1 1898 aaKnown RBP11.17□□□□□ -0.62
HMGCS1-202ENST00000433297 CLEC2DQ9UHP7 191 aa11.17□□□□□ -0.62
HMGCS1-202ENST00000433297 CLEC2LP0C7M8 214 aa11.16□□□□□ -0.62
HMGCS1-202ENST00000433297 IL1RNP18510 177 aa11.16□□□□□ -0.62
HMGCS1-202ENST00000433297 POU3F3P20264 500 aaPredicted RBP11.16□□□□□ -0.62
HMGCS1-202ENST00000433297 MOB2Q70IA6 237 aa11.16□□□□□ -0.62
HMGCS1-202ENST00000433297 TIGD4Q8IY51 512 aa11.16□□□□□ -0.62
HMGCS1-202ENST00000433297 LGI4Q8N135 537 aa11.16□□□□□ -0.62
HMGCS1-202ENST00000433297 BHMTQ93088 406 aa11.16□□□□□ -0.62
HMGCS1-202ENST00000433297 ZSCAN5AQ9BUG6 496 aa11.16□□□□□ -0.62
HMGCS1-202ENST00000433297 NLKQ9UBE8 527 aa11.16□□□□□ -0.62
HMGCS1-202ENST00000433297 RABL2BQ9UNT1 228 aa11.16□□□□□ -0.62
HMGCS1-202ENST00000433297 TRAPPC4Q9Y296 219 aa11.16□□□□□ -0.62
HMGCS1-202ENST00000433297 CFAP20Q9Y6A4 193 aaKnown RBP11.16□□□□□ -0.62
HMGCS1-202ENST00000433297 ZNF236Q9UL36 1845 aa11.16□□□□□ -0.62
HMGCS1-202ENST00000433297 MAGEB17A8MXT2 336 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms