RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 ZNF585BQ52M93 769 aa2.83□□□□□ -1.96
HMGB1P27-201ENST00000431429 AGAP6Q5VW22 663 aa2.83□□□□□ -1.96
HMGB1P27-201ENST00000431429 PRAMEF8Q5VWM4 474 aa2.83□□□□□ -1.96
HMGB1P27-201ENST00000431429 KCTD11Q693B1 232 aa2.83□□□□□ -1.96
HMGB1P27-201ENST00000431429 C19orf48Q6RUI8 117 aa2.83□□□□□ -1.96
HMGB1P27-201ENST00000431429 PRSS42Q7Z5A4 293 aa2.83□□□□□ -1.96
HMGB1P27-201ENST00000431429 ISCA2Q86U28 154 aa2.83□□□□□ -1.96
HMGB1P27-201ENST00000431429 CCDC83Q8IWF9 413 aa2.83□□□□□ -1.96
HMGB1P27-201ENST00000431429 RCOR2Q8IZ40 523 aa2.83□□□□□ -1.96
HMGB1P27-201ENST00000431429 TDHQ8IZJ6 230 aa2.83□□□□□ -1.96
HMGB1P27-201ENST00000431429 MARVELD2Q8N4S9 558 aa2.83□□□□□ -1.96
HMGB1P27-201ENST00000431429 KLHDC1Q8N7A1 406 aa2.83□□□□□ -1.96
HMGB1P27-201ENST00000431429 RTL3Q8N8U3 475 aaKnown RBP2.83□□□□□ -1.96
HMGB1P27-201ENST00000431429 ZNF383Q8NA42 475 aa2.83□□□□□ -1.96
HMGB1P27-201ENST00000431429 LPCAT1Q8NF37 534 aa2.83□□□□□ -1.96
HMGB1P27-201ENST00000431429 OR13A1Q8NGR1 328 aa2.83□□□□□ -1.96
HMGB1P27-201ENST00000431429 MGARPQ8TDB4 240 aa2.83□□□□□ -1.96
HMGB1P27-201ENST00000431429 SLC26A7Q8TE54 656 aa2.83□□□□□ -1.96
HMGB1P27-201ENST00000431429 HPSE2Q8WWQ2 592 aa2.83□□□□□ -1.96
HMGB1P27-201ENST00000431429 CD101Q93033 1021 aa2.83□□□□□ -1.96
HMGB1P27-201ENST00000431429 PGM2Q96G03 612 aa2.83□□□□□ -1.96
HMGB1P27-201ENST00000431429 TSSK2Q96PF2 358 aa2.83□□□□□ -1.96
HMGB1P27-201ENST00000431429 CDCA3Q99618 268 aaPredicted RBP2.83□□□□□ -1.96
HMGB1P27-201ENST00000431429 PRMT1Q99873 361 aaKnown RBP2.83□□□□□ -1.96
HMGB1P27-201ENST00000431429 PSD2Q9BQI7 771 aa2.83□□□□□ -1.96
HMGB1P27-201ENST00000431429 ACAT2Q9BWD1 397 aa2.83□□□□□ -1.96
HMGB1P27-201ENST00000431429 OSBPL8Q9BZF1 889 aa2.83□□□□□ -1.96
HMGB1P27-201ENST00000431429 TSPYL1Q9H0U9 437 aa2.83□□□□□ -1.96
HMGB1P27-201ENST00000431429 MMP28Q9H239 520 aa2.83□□□□□ -1.96
HMGB1P27-201ENST00000431429 P2RY12Q9H244 342 aa2.83□□□□□ -1.96
HMGB1P27-201ENST00000431429 C5orf66Q9H5L9 145 aa2.83□□□□□ -1.96
HMGB1P27-201ENST00000431429 ZDHHC6Q9H6R6 413 aa2.83□□□□□ -1.96
HMGB1P27-201ENST00000431429 TMEM161AQ9NX61 479 aa2.83□□□□□ -1.96
HMGB1P27-201ENST00000431429 MAN1B1Q9UKM7 699 aa2.83□□□□□ -1.96
HMGB1P27-201ENST00000431429 TNFRSF18Q9Y5U5 241 aa2.83□□□□□ -1.96
HMGB1P27-201ENST00000431429 TEX264Q9Y6I9 313 aa2.83□□□□□ -1.96
HMGB1P27-201ENST00000431429 ACEP12821 1306 aa2.83□□□□□ -1.96
HMGB1P27-201ENST00000431429 TRAPPC8Q9Y2L5 1435 aa2.83□□□□□ -1.96
HMGB1P27-201ENST00000431429 MAGI2Q86UL8 1455 aa2.83□□□□□ -1.96
HMGB1P27-201ENST00000431429 NEO1Q92859 1461 aa2.83□□□□□ -1.96
HMGB1P27-201ENST00000431429 TRAV18A0A075B6X5 111 aa2.82□□□□□ -1.96
HMGB1P27-201ENST00000431429 A0A087X0K7 114 aa2.82□□□□□ -1.96
HMGB1P27-201ENST00000431429 GTPBP10A4D1E9 387 aaKnown RBP2.82□□□□□ -1.96
HMGB1P27-201ENST00000431429 FAM149AA5PLN7 773 aa2.82□□□□□ -1.96
HMGB1P27-201ENST00000431429 ANTXRLA6NF34 631 aa2.82□□□□□ -1.96
HMGB1P27-201ENST00000431429 SERINC4A6NH21 518 aa2.82□□□□□ -1.96
HMGB1P27-201ENST00000431429 ANKDD1BA6NHY2 528 aa2.82□□□□□ -1.96
HMGB1P27-201ENST00000431429 MSGN1A6NI15 193 aa2.82□□□□□ -1.96
HMGB1P27-201ENST00000431429 P2RY10O00398 339 aa2.82□□□□□ -1.96
HMGB1P27-201ENST00000431429 PGRMC2O15173 223 aa2.82□□□□□ -1.96
HMGB1P27-201ENST00000431429 SCO2O43819 266 aa2.82□□□□□ -1.96
HMGB1P27-201ENST00000431429 ATP9AO75110 1047 aa2.82□□□□□ -1.96
HMGB1P27-201ENST00000431429 KHDRBS3O75525 346 aaKnown RBP2.82□□□□□ -1.96
HMGB1P27-201ENST00000431429 PAK4O96013 591 aaPredicted RBP2.82□□□□□ -1.96
HMGB1P27-201ENST00000431429 VTNP04004 478 aa2.82□□□□□ -1.96
HMGB1P27-201ENST00000431429 THEGLP0DJG4 465 aa2.82□□□□□ -1.96
HMGB1P27-201ENST00000431429 STMN1P16949 149 aa2.82□□□□□ -1.96
HMGB1P27-201ENST00000431429 CYP2A7P20853 494 aa2.82□□□□□ -1.96
HMGB1P27-201ENST00000431429 ITGA3P26006 1051 aa2.82□□□□□ -1.96
HMGB1P27-201ENST00000431429 UCP2P55851 309 aa2.82□□□□□ -1.96
HMGB1P27-201ENST00000431429 NME5P56597 212 aa2.82□□□□□ -1.96
HMGB1P27-201ENST00000431429 HERV-K104P61576 105 aa2.82□□□□□ -1.96
HMGB1P27-201ENST00000431429 POU3F1Q03052 451 aaPredicted RBP2.82□□□□□ -1.96
HMGB1P27-201ENST00000431429 TEFQ10587 303 aa2.82□□□□□ -1.96
HMGB1P27-201ENST00000431429 FHL1Q13642 323 aa2.82□□□□□ -1.96
HMGB1P27-201ENST00000431429 STXBP2Q15833 593 aa2.82□□□□□ -1.96
HMGB1P27-201ENST00000431429 ZNF672Q499Z4 452 aaPredicted RBP2.82□□□□□ -1.96
HMGB1P27-201ENST00000431429 C20orf194Q5TEA3 1177 aa2.82□□□□□ -1.96
HMGB1P27-201ENST00000431429 ZNF772Q68DY9 489 aaPredicted RBP2.82□□□□□ -1.96
HMGB1P27-201ENST00000431429 RABEPKQ7Z6M1 372 aa2.82□□□□□ -1.96
HMGB1P27-201ENST00000431429 TRPT1Q86TN4 253 aaKnown RBP2.82□□□□□ -1.96
HMGB1P27-201ENST00000431429 PRUNE1Q86TP1 453 aa2.82□□□□□ -1.96
HMGB1P27-201ENST00000431429 KIRREL3Q8IZU9 778 aa2.82□□□□□ -1.96
HMGB1P27-201ENST00000431429 ZNF619Q8N2I2 560 aa2.82□□□□□ -1.96
HMGB1P27-201ENST00000431429 PRSS35Q8N3Z0 413 aa2.82□□□□□ -1.96
HMGB1P27-201ENST00000431429 CHCHD4Q8N4Q1 142 aa2.82□□□□□ -1.96
HMGB1P27-201ENST00000431429 MAB21L3Q8N8X9 362 aa2.82□□□□□ -1.96
HMGB1P27-201ENST00000431429 LRTM2Q8N967 370 aa2.82□□□□□ -1.96
HMGB1P27-201ENST00000431429 LMNTD1Q8N9Z9 388 aa2.82□□□□□ -1.96
HMGB1P27-201ENST00000431429 DMBX1Q8NFW5 382 aa2.82□□□□□ -1.96
HMGB1P27-201ENST00000431429 OR1L3Q8NH93 324 aa2.82□□□□□ -1.96
HMGB1P27-201ENST00000431429 TSACCQ96A04 125 aaPredicted RBP2.82□□□□□ -1.96
HMGB1P27-201ENST00000431429 ZNF524Q96C55 264 aa2.82□□□□□ -1.96
HMGB1P27-201ENST00000431429 C5orf30Q96GV9 206 aa2.82□□□□□ -1.96
HMGB1P27-201ENST00000431429 RBM41Q96IZ5 413 aaKnown RBP2.82□□□□□ -1.96
HMGB1P27-201ENST00000431429 RHNO1Q9BSD3 238 aa2.82□□□□□ -1.96
HMGB1P27-201ENST00000431429 URM1Q9BTM9 101 aaKnown RBP2.82□□□□□ -1.96
HMGB1P27-201ENST00000431429 PANK2Q9BZ23 570 aa2.82□□□□□ -1.96
HMGB1P27-201ENST00000431429 C10orf88Q9H8K7 445 aa2.82□□□□□ -1.96
HMGB1P27-201ENST00000431429 MAGEF1Q9HAY2 307 aa2.82□□□□□ -1.96
HMGB1P27-201ENST00000431429 SIX2Q9NPC8 291 aa2.82□□□□□ -1.96
HMGB1P27-201ENST00000431429 CHST11Q9NPF2 352 aa2.82□□□□□ -1.96
HMGB1P27-201ENST00000431429 C2orf42Q9NWW7 574 aa2.82□□□□□ -1.96
HMGB1P27-201ENST00000431429 DONSONQ9NYP3 566 aa2.82□□□□□ -1.96
HMGB1P27-201ENST00000431429 OR6C2Q9NZP2 312 aa2.82□□□□□ -1.96
HMGB1P27-201ENST00000431429 TAAR2Q9P1P5 351 aa2.82□□□□□ -1.96
HMGB1P27-201ENST00000431429 ZNF624Q9P2J8 865 aaPredicted RBP2.82□□□□□ -1.96
HMGB1P27-201ENST00000431429 GRID1Q9ULK0 1009 aa2.82□□□□□ -1.96
HMGB1P27-201ENST00000431429 STX8Q9UNK0 236 aa2.82□□□□□ -1.96
HMGB1P27-201ENST00000431429 AGTPBP1Q9UPW5 1226 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms