RNA–Protein interactions for RNA: ENST00000430328.6

RIF1-204, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,992 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-204ENST00000430328 C2orf72A6NCS6 295 aa16.03■□□□□ 0.16
RIF1-204ENST00000430328 MT-ND2P03891 347 aa16.03■□□□□ 0.16
RIF1-204ENST00000430328 RIDAP52758 137 aaKnown RBP16.03■□□□□ 0.16
RIF1-204ENST00000430328 ERVK-25P63136 954 aa16.03■□□□□ 0.16
RIF1-204ENST00000430328 CYCSP99999 105 aaKnown RBP16.03■□□□□ 0.16
RIF1-204ENST00000430328 OR2T5Q6IEZ7 315 aa16.03■□□□□ 0.16
RIF1-204ENST00000430328 OR2T29Q8NH02 315 aa16.03■□□□□ 0.16
RIF1-204ENST00000430328 DNTTIP1Q9H147 329 aa16.03■□□□□ 0.16
RIF1-204ENST00000430328 PPIL3Q9H2H8 161 aaKnown RBP16.03■□□□□ 0.16
RIF1-204ENST00000430328 NLGN3Q9NZ94 848 aa16.03■□□□□ 0.16
RIF1-204ENST00000430328 SHANK2Q9UPX8 1470 aa16.03■□□□□ 0.16
RIF1-204ENST00000430328 SLC2A5P22732 501 aa16.03■□□□□ 0.16
RIF1-204ENST00000430328 OC90Q02509 493 aaPredicted RBP16.03■□□□□ 0.16
RIF1-204ENST00000430328 KCNIP4Q6PIL6 250 aa16.03■□□□□ 0.16
RIF1-204ENST00000430328 MYLIPQ8WY64 445 aa16.03■□□□□ 0.16
RIF1-204ENST00000430328 SLC35A5Q9BS91 424 aa16.03■□□□□ 0.16
RIF1-204ENST00000430328 CCDC32Q9BV29 185 aa16.03■□□□□ 0.16
RIF1-204ENST00000430328 ZNF223Q9UK11 482 aaPredicted RBP16.03■□□□□ 0.16
RIF1-204ENST00000430328 CA5BQ9Y2D0 317 aa16.03■□□□□ 0.16
RIF1-204ENST00000430328 TSPOAP1O95153 1857 aa16.03■□□□□ 0.16
RIF1-204ENST00000430328 NRKQ7Z2Y5 1582 aa16.03■□□□□ 0.16
RIF1-204ENST00000430328 TREHO43280 583 aa16.02■□□□□ 0.16
RIF1-204ENST00000430328 HABP2Q14520 560 aaPredicted RBP16.02■□□□□ 0.16
RIF1-204ENST00000430328 TMCO2Q7Z6W1 182 aaPredicted RBP16.02■□□□□ 0.16
RIF1-204ENST00000430328 ZNF675Q8TD23 568 aa16.02■□□□□ 0.16
RIF1-204ENST00000430328 HYLS1Q96M11 299 aa16.02■□□□□ 0.16
RIF1-204ENST00000430328 GPR21Q99679 349 aa16.02■□□□□ 0.16
RIF1-204ENST00000430328 WDR6Q9NNW5 1121 aaKnown RBP16.02■□□□□ 0.16
RIF1-204ENST00000430328 IGSF9Q9P2J2 1179 aa16.02■□□□□ 0.16
RIF1-204ENST00000430328 CBY1Q9Y3M2 126 aa16.02■□□□□ 0.16
RIF1-204ENST00000430328 J3QR89 54 aa16.02■□□□□ 0.16
RIF1-204ENST00000430328 EEF1E1O43324 174 aaKnown RBP16.02■□□□□ 0.16
RIF1-204ENST00000430328 DPP6P42658 865 aa16.02■□□□□ 0.16
RIF1-204ENST00000430328 RFX5P48382 616 aaPredicted RBP16.02■□□□□ 0.16
RIF1-204ENST00000430328 RPS14P62263 151 aaKnown RBP16.02■□□□□ 0.16
RIF1-204ENST00000430328 PARP15Q460N3 678 aa16.02■□□□□ 0.16
RIF1-204ENST00000430328 SLC15A3Q8IY34 581 aa16.02■□□□□ 0.16
RIF1-204ENST00000430328 METTL4Q8N3J2 472 aa16.02■□□□□ 0.16
RIF1-204ENST00000430328 NATD1Q8N6N6 113 aa16.02■□□□□ 0.16
RIF1-204ENST00000430328 FAM46DQ8NEK8 389 aa16.02■□□□□ 0.16
RIF1-204ENST00000430328 EPS8L1Q8TE68 723 aa16.02■□□□□ 0.16
RIF1-204ENST00000430328 BTNL10A8MVZ5 291 aa16.02■□□□□ 0.16
RIF1-204ENST00000430328 S1PR1P21453 382 aa16.02■□□□□ 0.16
RIF1-204ENST00000430328 CHRNA4P43681 627 aa16.02■□□□□ 0.16
RIF1-204ENST00000430328 RFWD3Q6PCD5 774 aa16.02■□□□□ 0.16
RIF1-204ENST00000430328 MTMR9Q96QG7 549 aa16.02■□□□□ 0.16
RIF1-204ENST00000430328 NIFKQ9BYG3 293 aaKnown RBP16.02■□□□□ 0.16
RIF1-204ENST00000430328 OR2AG2A6NM03 316 aa16.02■□□□□ 0.15
RIF1-204ENST00000430328 CHATP28329 748 aa16.02■□□□□ 0.15
RIF1-204ENST00000430328 EVI2BP34910 448 aa16.02■□□□□ 0.15
RIF1-204ENST00000430328 ZNF781Q8N8C0 355 aa16.02■□□□□ 0.15
RIF1-204ENST00000430328 PRELID2Q8N945 189 aa16.02■□□□□ 0.15
RIF1-204ENST00000430328 TGM7Q96PF1 710 aa16.02■□□□□ 0.15
RIF1-204ENST00000430328 CELF2O95319 508 aaKnown RBP16.02■□□□□ 0.15
RIF1-204ENST00000430328 MAOAP21397 527 aa16.02■□□□□ 0.15
RIF1-204ENST00000430328 MAP2K3P46734 347 aa16.02■□□□□ 0.15
RIF1-204ENST00000430328 SOX10P56693 466 aa16.02■□□□□ 0.15
RIF1-204ENST00000430328 LRP8Q14114 963 aa16.02■□□□□ 0.15
RIF1-204ENST00000430328 NOXRED1Q6NXP6 359 aa16.02■□□□□ 0.15
RIF1-204ENST00000430328 NFATC4Q14934 902 aa16.02■□□□□ 0.15
RIF1-204ENST00000430328 DCBLD1Q8N8Z6 715 aa16.02■□□□□ 0.15
RIF1-204ENST00000430328 OR6Q1Q8NGQ2 317 aa16.02■□□□□ 0.15
RIF1-204ENST00000430328 PGAP3Q96FM1 320 aaPredicted RBP16.02■□□□□ 0.15
RIF1-204ENST00000430328 AURKBQ96GD4 344 aaPredicted RBP16.02■□□□□ 0.15
RIF1-204ENST00000430328 OSBPL7Q9BZF2 842 aa16.02■□□□□ 0.15
RIF1-204ENST00000430328 TP63Q9H3D4 680 aaPredicted RBP16.02■□□□□ 0.15
RIF1-204ENST00000430328 SMCO4Q9NRQ5 59 aa16.02■□□□□ 0.15
RIF1-204ENST00000430328 NPHS1O60500 1241 aa16.01■□□□□ 0.15
RIF1-204ENST00000430328 ERCC1P07992 297 aaPredicted RBP16.01■□□□□ 0.15
RIF1-204ENST00000430328 IGFBP4P22692 258 aa16.01■□□□□ 0.15
RIF1-204ENST00000430328 MFSD5Q6N075 450 aa16.01■□□□□ 0.15
RIF1-204ENST00000430328 ZNF367Q7RTV3 350 aa16.01■□□□□ 0.15
RIF1-204ENST00000430328 OR6K2Q8NGY2 324 aa16.01■□□□□ 0.15
RIF1-204ENST00000430328 ZNF420Q8TAQ5 688 aaPredicted RBP16.01■□□□□ 0.15
RIF1-204ENST00000430328 SLC25A44Q96H78 314 aaPredicted RBP16.01■□□□□ 0.15
RIF1-204ENST00000430328 OR4K3Q96R72 315 aa16.01■□□□□ 0.15
RIF1-204ENST00000430328 NCANO14594 1321 aa16.01■□□□□ 0.15
RIF1-204ENST00000430328 C9JVG2 144 aa16.01■□□□□ 0.15
RIF1-204ENST00000430328 PRKCGP05129 697 aa16.01■□□□□ 0.15
RIF1-204ENST00000430328 CLRN1P58418 232 aa16.01■□□□□ 0.15
RIF1-204ENST00000430328 PLP2Q04941 152 aa16.01■□□□□ 0.15
RIF1-204ENST00000430328 LY6KQ17RY6 165 aa16.01■□□□□ 0.15
RIF1-204ENST00000430328 PIGGQ5H8A4 983 aa16.01■□□□□ 0.15
RIF1-204ENST00000430328 PDSS1Q5T2R2 415 aa16.01■□□□□ 0.15
RIF1-204ENST00000430328 SLC36A4Q6YBV0 504 aa16.01■□□□□ 0.15
RIF1-204ENST00000430328 OR2AP1Q8NGE2 309 aa16.01■□□□□ 0.15
RIF1-204ENST00000430328 NEIL3Q8TAT5 605 aa16.01■□□□□ 0.15
RIF1-204ENST00000430328 C17orf62Q9BQA9 187 aa16.01■□□□□ 0.15
RIF1-204ENST00000430328 URM1Q9BTM9 101 aaKnown RBP16.01■□□□□ 0.15
RIF1-204ENST00000430328 MRPS30Q9NP92 439 aaKnown RBP16.01■□□□□ 0.15
RIF1-204ENST00000430328 USP42Q9H9J4 1324 aaKnown RBP16.01■□□□□ 0.15
RIF1-204ENST00000430328 A0A1B0GVT2 93 aa16.01■□□□□ 0.15
RIF1-204ENST00000430328 HOXD8P13378 290 aaPredicted RBP16.01■□□□□ 0.15
RIF1-204ENST00000430328 PLA2G16P53816 162 aa16.01■□□□□ 0.15
RIF1-204ENST00000430328 PAOXQ6QHF9 649 aa16.01■□□□□ 0.15
RIF1-204ENST00000430328 FTMTQ8N4E7 242 aa16.01■□□□□ 0.15
RIF1-204ENST00000430328 OR7G1Q8NGA0 311 aa16.01■□□□□ 0.15
RIF1-204ENST00000430328 P2RY11Q96G91 374 aa16.01■□□□□ 0.15
RIF1-204ENST00000430328 FAIMQ9NVQ4 179 aa16.01■□□□□ 0.15
RIF1-204ENST00000430328 AQP12BA6NM10 295 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms