RNA–Protein interactions for RNA: ENST00000430158.5

USP40-205, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 1,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-205ENST00000430158 OR7A17O14581 309 aa11.86□□□□□ -0.51
USP40-205ENST00000430158 TERTO14746 1132 aaKnown RBP11.86□□□□□ -0.51
USP40-205ENST00000430158 SMIM24O75264 130 aa11.86□□□□□ -0.51
USP40-205ENST00000430158 SPAG7O75391 227 aa11.86□□□□□ -0.51
USP40-205ENST00000430158 SASH3O75995 380 aa11.86□□□□□ -0.51
USP40-205ENST00000430158 OR2B3O76000 313 aa11.86□□□□□ -0.51
USP40-205ENST00000430158 STK17BO94768 372 aa11.86□□□□□ -0.51
USP40-205ENST00000430158 KIAA0754O94854 1291 aa11.86□□□□□ -0.51
USP40-205ENST00000430158 ONECUT2O95948 504 aa11.86□□□□□ -0.51
USP40-205ENST00000430158 ITGAXP20702 1163 aa11.86□□□□□ -0.51
USP40-205ENST00000430158 IMPDH1P20839 514 aa11.86□□□□□ -0.51
USP40-205ENST00000430158 CD82P27701 267 aa11.86□□□□□ -0.51
USP40-205ENST00000430158 EEF1DP29692 281 aaKnown RBP11.86□□□□□ -0.51
USP40-205ENST00000430158 VSX2P58304 361 aaPredicted RBP11.86□□□□□ -0.51
USP40-205ENST00000430158 RPS15AP62244 130 aaKnown RBP11.86□□□□□ -0.51
USP40-205ENST00000430158 GTF2H2Q13888 395 aa11.86□□□□□ -0.51
USP40-205ENST00000430158 DOC2AQ14183 400 aa11.86□□□□□ -0.51
USP40-205ENST00000430158 MAP7Q14244 749 aa11.86□□□□□ -0.51
USP40-205ENST00000430158 CCDC153Q494R4 210 aa11.86□□□□□ -0.51
USP40-205ENST00000430158 WASHC2DQ5SRD0 308 aa11.86□□□□□ -0.51
USP40-205ENST00000430158 ZNF678Q5SXM1 525 aa11.86□□□□□ -0.51
USP40-205ENST00000430158 TMEM164Q5U3C3 297 aa11.86□□□□□ -0.51
USP40-205ENST00000430158 GTF2H2CQ6P1K8 395 aa11.86□□□□□ -0.51
USP40-205ENST00000430158 RPS27LQ71UM5 84 aaKnown RBP11.86□□□□□ -0.51
USP40-205ENST00000430158 GOLGA7Q7Z5G4 137 aa11.86□□□□□ -0.51
USP40-205ENST00000430158 VN1R5Q7Z5H4 357 aa11.86□□□□□ -0.51
USP40-205ENST00000430158 TEX9Q8N6V9 391 aa11.86□□□□□ -0.51
USP40-205ENST00000430158 ANKRD53Q8N9V6 530 aa11.86□□□□□ -0.51
USP40-205ENST00000430158 TCP10LQ8TDR4 215 aa11.86□□□□□ -0.51
USP40-205ENST00000430158 CREB3L4Q8TEY5 395 aa11.86□□□□□ -0.51
USP40-205ENST00000430158 ARL8AQ96BM9 186 aa11.86□□□□□ -0.51
USP40-205ENST00000430158 L3HYPDHQ96EM0 354 aa11.86□□□□□ -0.51
USP40-205ENST00000430158 RNF31Q96EP0 1072 aa11.86□□□□□ -0.51
USP40-205ENST00000430158 C10orf90Q96M02 699 aa11.86□□□□□ -0.51
USP40-205ENST00000430158 TMEM237Q96Q45 408 aa11.86□□□□□ -0.51
USP40-205ENST00000430158 SH3GL2Q99962 352 aa11.86□□□□□ -0.51
USP40-205ENST00000430158 SELENOSQ9BQE4 189 aa11.86□□□□□ -0.51
USP40-205ENST00000430158 CAPS2Q9BXY5 557 aa11.86□□□□□ -0.51
USP40-205ENST00000430158 AICDAQ9GZX7 198 aa11.86□□□□□ -0.51
USP40-205ENST00000430158 NT5DC2Q9H857 520 aa11.86□□□□□ -0.51
USP40-205ENST00000430158 VIPAS39Q9H9C1 493 aa11.86□□□□□ -0.51
USP40-205ENST00000430158 STARD5Q9NSY2 213 aa11.86□□□□□ -0.51
USP40-205ENST00000430158 OPTCQ9UBM4 332 aa11.86□□□□□ -0.51
USP40-205ENST00000430158 ZNF225Q9UK10 706 aa11.86□□□□□ -0.51
USP40-205ENST00000430158 AP1M2Q9Y6Q5 423 aa11.86□□□□□ -0.51
USP40-205ENST00000430158 MGAQ8IWI9 3026 aa11.85□□□□□ -0.51
USP40-205ENST00000430158 TEX51A0A1B0GUA7 166 aa11.85□□□□□ -0.51
USP40-205ENST00000430158 ZSCAN9O15535 394 aaPredicted RBP11.85□□□□□ -0.51
USP40-205ENST00000430158 MAP3K7O43318 606 aa11.85□□□□□ -0.51
USP40-205ENST00000430158 ZNF749O43361 778 aa11.85□□□□□ -0.51
USP40-205ENST00000430158 SCRG1O75711 98 aa11.85□□□□□ -0.51
USP40-205ENST00000430158 NTRK1P04629 796 aa11.85□□□□□ -0.51
USP40-205ENST00000430158 CAPN1P07384 714 aa11.85□□□□□ -0.51
USP40-205ENST00000430158 DHRS4L1P0CG22 281 aa11.85□□□□□ -0.51
USP40-205ENST00000430158 DNAJB13P59910 316 aa11.85□□□□□ -0.51
USP40-205ENST00000430158 HERVK_113P63132 956 aa11.85□□□□□ -0.51
USP40-205ENST00000430158 HYAL2Q12891 473 aa11.85□□□□□ -0.51
USP40-205ENST00000430158 TRAF3Q13114 568 aa11.85□□□□□ -0.51
USP40-205ENST00000430158 GPS2Q13227 327 aa11.85□□□□□ -0.51
USP40-205ENST00000430158 CHIT1Q13231 466 aa11.85□□□□□ -0.51
USP40-205ENST00000430158 CLN3Q13286 438 aa11.85□□□□□ -0.51
USP40-205ENST00000430158 PCLAFQ15004 111 aa11.85□□□□□ -0.51
USP40-205ENST00000430158 TGIF1Q15583 401 aa11.85□□□□□ -0.51
USP40-205ENST00000430158 HKDC1Q2TB90 917 aa11.85□□□□□ -0.51
USP40-205ENST00000430158 TCTE1Q5JU00 501 aa11.85□□□□□ -0.51
USP40-205ENST00000430158 LCN10Q6JVE6 187 aa11.85□□□□□ -0.51
USP40-205ENST00000430158 RHBDD2Q6NTF9 364 aa11.85□□□□□ -0.51
USP40-205ENST00000430158 TLDC1Q6P9B6 456 aa11.85□□□□□ -0.51
USP40-205ENST00000430158 CYB5D1Q6P9G0 228 aa11.85□□□□□ -0.51
USP40-205ENST00000430158 HDXQ7Z353 690 aa11.85□□□□□ -0.51
USP40-205ENST00000430158 TMPRSS11BQ86T26 416 aa11.85□□□□□ -0.51
USP40-205ENST00000430158 ZNF655Q8N720 491 aaPredicted RBP11.85□□□□□ -0.51
USP40-205ENST00000430158 SNX31Q8N9S9 440 aa11.85□□□□□ -0.51
USP40-205ENST00000430158 L3MBTL4Q8NA19 623 aa11.85□□□□□ -0.51
USP40-205ENST00000430158 OR6Y1Q8NGX8 325 aa11.85□□□□□ -0.51
USP40-205ENST00000430158 RDH11Q8TC12 318 aa11.85□□□□□ -0.51
USP40-205ENST00000430158 NKD1Q969G9 470 aa11.85□□□□□ -0.51
USP40-205ENST00000430158 PTCD3Q96EY7 689 aaKnown RBP11.85□□□□□ -0.51
USP40-205ENST00000430158 GBP5Q96PP8 586 aa11.85□□□□□ -0.51
USP40-205ENST00000430158 SMC6Q96SB8 1091 aa11.85□□□□□ -0.51
USP40-205ENST00000430158 NTMT1Q9BV86 223 aa11.85□□□□□ -0.51
USP40-205ENST00000430158 ERVK-6Q9BXR3 956 aa11.85□□□□□ -0.51
USP40-205ENST00000430158 ULBP3Q9BZM4 244 aa11.85□□□□□ -0.51
USP40-205ENST00000430158 PITHD1Q9GZP4 211 aaPredicted RBP11.85□□□□□ -0.51
USP40-205ENST00000430158 FANCEQ9HB96 536 aa11.85□□□□□ -0.51
USP40-205ENST00000430158 ACSS2Q9NR19 701 aa11.85□□□□□ -0.51
USP40-205ENST00000430158 SLC22A11Q9NSA0 550 aa11.85□□□□□ -0.51
USP40-205ENST00000430158 OXSMQ9NWU1 459 aa11.85□□□□□ -0.51
USP40-205ENST00000430158 RUVBL1Q9Y265 456 aaKnown RBP11.85□□□□□ -0.51
USP40-205ENST00000430158 MRPS2Q9Y399 296 aaKnown RBP11.85□□□□□ -0.51
USP40-205ENST00000430158 SCN2AQ99250 2005 aa11.85□□□□□ -0.51
USP40-205ENST00000430158 MED13Q9UHV7 2174 aa11.84□□□□□ -0.51
USP40-205ENST00000430158 TMEM8BA6NDV4 472 aa11.84□□□□□ -0.51
USP40-205ENST00000430158 PRPF4O43172 522 aaKnown RBP eCLIP11.84□□□□□ -0.51
USP40-205ENST00000430158 CPA3P15088 417 aa11.84□□□□□ -0.51
USP40-205ENST00000430158 EPB42P16452 691 aa11.84□□□□□ -0.51
USP40-205ENST00000430158 TAC1P20366 129 aa11.84□□□□□ -0.51
USP40-205ENST00000430158 AHRP35869 848 aa11.84□□□□□ -0.51
USP40-205ENST00000430158 EIF2S3P41091 472 aaKnown RBP11.84□□□□□ -0.51
USP40-205ENST00000430158 COL9A2Q14055 689 aaPredicted RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms