RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 SLC5A11Q8WWX8 675 aa9.14□□□□□ -0.95
HMGCLL1-206ENST00000428842 CCDC126Q96EE4 140 aa9.14□□□□□ -0.95
HMGCLL1-206ENST00000428842 C19orf60Q96EN9 201 aa9.14□□□□□ -0.95
HMGCLL1-206ENST00000428842 APIPQ96GX9 242 aa9.14□□□□□ -0.95
HMGCLL1-206ENST00000428842 NSL1Q96IY1 281 aa9.14□□□□□ -0.95
HMGCLL1-206ENST00000428842 BTBD10Q9BSF8 475 aa9.14□□□□□ -0.95
HMGCLL1-206ENST00000428842 CADM1Q9BY67 442 aaKnown RBP9.14□□□□□ -0.95
HMGCLL1-206ENST00000428842 ABCG4Q9H172 646 aa9.14□□□□□ -0.95
HMGCLL1-206ENST00000428842 DENND2DQ9H6A0 471 aaPredicted RBP9.14□□□□□ -0.95
HMGCLL1-206ENST00000428842 ARL8BQ9NVJ2 186 aa9.14□□□□□ -0.95
HMGCLL1-206ENST00000428842 ACTR10Q9NZ32 417 aa9.14□□□□□ -0.95
HMGCLL1-206ENST00000428842 KCNE2Q9Y6J6 123 aa9.14□□□□□ -0.95
HMGCLL1-206ENST00000428842 FER1L5A0AVI2 2057 aa9.14□□□□□ -0.95
HMGCLL1-206ENST00000428842 IGF2RP11717 2491 aa9.14□□□□□ -0.95
HMGCLL1-206ENST00000428842 A0A1W2PQM1 296 aa9.13□□□□□ -0.95
HMGCLL1-206ENST00000428842 C4orf47A7E2U8 309 aa9.13□□□□□ -0.95
HMGCLL1-206ENST00000428842 TMEM114B3SHH9 223 aa9.13□□□□□ -0.95
HMGCLL1-206ENST00000428842 KHNYNO15037 678 aaKnown RBP9.13□□□□□ -0.95
HMGCLL1-206ENST00000428842 HDAC3O15379 428 aa9.13□□□□□ -0.95
HMGCLL1-206ENST00000428842 P2RX6O15547 441 aa9.13□□□□□ -0.95
HMGCLL1-206ENST00000428842 CCDC22O60826 627 aa9.13□□□□□ -0.95
HMGCLL1-206ENST00000428842 RSL1D1O76021 490 aaKnown RBP9.13□□□□□ -0.95
HMGCLL1-206ENST00000428842 HMOX2P30519 316 aa9.13□□□□□ -0.95
HMGCLL1-206ENST00000428842 RPS13P62277 151 aaKnown RBP9.13□□□□□ -0.95
HMGCLL1-206ENST00000428842 CYP2A13Q16696 494 aa9.13□□□□□ -0.95
HMGCLL1-206ENST00000428842 C14orf28Q4W4Y0 310 aa9.13□□□□□ -0.95
HMGCLL1-206ENST00000428842 EPGNQ6UW88 154 aa9.13□□□□□ -0.95
HMGCLL1-206ENST00000428842 B3GNT8Q7Z7M8 397 aa9.13□□□□□ -0.95
HMGCLL1-206ENST00000428842 C17orf64Q86WR6 236 aa9.13□□□□□ -0.95
HMGCLL1-206ENST00000428842 HMGCLL1Q8TB92 370 aa9.13□□□□□ -0.95
HMGCLL1-206ENST00000428842 UBTD2Q8WUN7 234 aa9.13□□□□□ -0.95
HMGCLL1-206ENST00000428842 SELENOMQ8WWX9 145 aa9.13□□□□□ -0.95
HMGCLL1-206ENST00000428842 SREK1Q8WXA9 508 aaKnown RBP9.13□□□□□ -0.95
HMGCLL1-206ENST00000428842 F2RL3Q96RI0 385 aa9.13□□□□□ -0.95
HMGCLL1-206ENST00000428842 ZNF382Q96SR6 550 aa9.13□□□□□ -0.95
HMGCLL1-206ENST00000428842 C1QTNF3Q9BXJ4 246 aa9.13□□□□□ -0.95
HMGCLL1-206ENST00000428842 MRPS30Q9NP92 439 aaKnown RBP9.13□□□□□ -0.95
HMGCLL1-206ENST00000428842 PADI4Q9UM07 663 aa9.13□□□□□ -0.95
HMGCLL1-206ENST00000428842 DLGAP4Q9Y2H0 992 aa9.13□□□□□ -0.95
HMGCLL1-206ENST00000428842 ZNF860A6NHJ4 632 aa9.13□□□□□ -0.95
HMGCLL1-206ENST00000428842 MANBAO00462 879 aa9.13□□□□□ -0.95
HMGCLL1-206ENST00000428842 GIPC1O14908 333 aa9.13□□□□□ -0.95
HMGCLL1-206ENST00000428842 OTCP00480 354 aa9.13□□□□□ -0.95
HMGCLL1-206ENST00000428842 LMNAP02545 664 aaKnown RBP9.13□□□□□ -0.95
HMGCLL1-206ENST00000428842 ERGP11308 486 aa9.13□□□□□ -0.95
HMGCLL1-206ENST00000428842 NUDT1P36639 197 aa9.13□□□□□ -0.95
HMGCLL1-206ENST00000428842 PLA2G16P53816 162 aa9.13□□□□□ -0.95
HMGCLL1-206ENST00000428842 RAB8AP61006 207 aa9.13□□□□□ -0.95
HMGCLL1-206ENST00000428842 CSNK1G2P78368 415 aa9.13□□□□□ -0.95
HMGCLL1-206ENST00000428842 OLR1P78380 273 aa9.13□□□□□ -0.95
HMGCLL1-206ENST00000428842 CDKL1Q00532 357 aa9.13□□□□□ -0.95
HMGCLL1-206ENST00000428842 PLOD1Q02809 727 aaPredicted RBP9.13□□□□□ -0.95
HMGCLL1-206ENST00000428842 PLA2G2CQ5R387 149 aa9.13□□□□□ -0.95
HMGCLL1-206ENST00000428842 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.13□□□□□ -0.95
HMGCLL1-206ENST00000428842 FCRL6Q6DN72 434 aa9.13□□□□□ -0.95
HMGCLL1-206ENST00000428842 NXPE4Q6UWF7 544 aa9.13□□□□□ -0.95
HMGCLL1-206ENST00000428842 ZNF574Q6ZN55 896 aaPredicted RBP9.13□□□□□ -0.95
HMGCLL1-206ENST00000428842 SLC9B2Q86UD5 537 aa9.13□□□□□ -0.95
HMGCLL1-206ENST00000428842 DCP2Q8IU60 420 aaKnown RBP9.13□□□□□ -0.95
HMGCLL1-206ENST00000428842 TRIM42Q8IWZ5 723 aa9.13□□□□□ -0.95
HMGCLL1-206ENST00000428842 OR2L8Q8NGY9 312 aa9.13□□□□□ -0.95
HMGCLL1-206ENST00000428842 DOK4Q8TEW6 326 aa9.13□□□□□ -0.95
HMGCLL1-206ENST00000428842 SMPDL3AQ92484 453 aa9.13□□□□□ -0.95
HMGCLL1-206ENST00000428842 NUSAP1Q9BXS6 441 aaKnown RBP9.13□□□□□ -0.95
HMGCLL1-206ENST00000428842 MVB12BQ9H7P6 319 aa9.13□□□□□ -0.95
HMGCLL1-206ENST00000428842 WASH6PQ9NQA3 447 aa9.13□□□□□ -0.95
HMGCLL1-206ENST00000428842 SEMA4GQ9NTN9 838 aa9.13□□□□□ -0.95
HMGCLL1-206ENST00000428842 KCNK4Q9NYG8 393 aa9.13□□□□□ -0.95
HMGCLL1-206ENST00000428842 C5AR2Q9P296 337 aa9.13□□□□□ -0.95
HMGCLL1-206ENST00000428842 MID2Q9UJV3 735 aa9.13□□□□□ -0.95
HMGCLL1-206ENST00000428842 RAB23Q9ULC3 237 aa9.13□□□□□ -0.95
HMGCLL1-206ENST00000428842 TNPO3Q9Y5L0 923 aaKnown RBP9.13□□□□□ -0.95
HMGCLL1-206ENST00000428842 PIEZO2Q9H5I5 2752 aa9.13□□□□□ -0.95
HMGCLL1-206ENST00000428842 PRR5-ARHGAP8B1AHC4 643 aa9.12□□□□□ -0.95
HMGCLL1-206ENST00000428842 GSC2O15499 205 aa9.12□□□□□ -0.95
HMGCLL1-206ENST00000428842 ULK1O75385 1050 aa9.12□□□□□ -0.95
HMGCLL1-206ENST00000428842 MED26O95402 600 aa9.12□□□□□ -0.95
HMGCLL1-206ENST00000428842 GCKP35557 465 aa9.12□□□□□ -0.95
HMGCLL1-206ENST00000428842 ERFP50548 548 aa9.12□□□□□ -0.95
HMGCLL1-206ENST00000428842 RPL38P63173 70 aaKnown RBP9.12□□□□□ -0.95
HMGCLL1-206ENST00000428842 CCL7P80098 99 aa9.12□□□□□ -0.95
HMGCLL1-206ENST00000428842 PRDX1Q06830 199 aaKnown RBP9.12□□□□□ -0.95
HMGCLL1-206ENST00000428842 NR6A1Q15406 480 aa9.12□□□□□ -0.95
HMGCLL1-206ENST00000428842 FAM69BQ5VUD6 431 aa9.12□□□□□ -0.95
HMGCLL1-206ENST00000428842 ASCL5Q7RTU5 278 aa9.12□□□□□ -0.95
HMGCLL1-206ENST00000428842 LRRC70Q7Z2Q7 622 aa9.12□□□□□ -0.95
HMGCLL1-206ENST00000428842 CLYBLQ8N0X4 340 aa9.12□□□□□ -0.95
HMGCLL1-206ENST00000428842 EFCAB3Q8N7B9 438 aa9.12□□□□□ -0.95
HMGCLL1-206ENST00000428842 WDR48Q8TAF3 677 aa9.12□□□□□ -0.95
HMGCLL1-206ENST00000428842 ZCCHC10Q8TBK6 192 aa9.12□□□□□ -0.95
HMGCLL1-206ENST00000428842 RAB3IL1Q8TBN0 382 aa9.12□□□□□ -0.95
HMGCLL1-206ENST00000428842 ELOVL6Q9H5J4 265 aa9.12□□□□□ -0.95
HMGCLL1-206ENST00000428842 DCLRE1BQ9H816 532 aa9.12□□□□□ -0.95
HMGCLL1-206ENST00000428842 TCF7L2Q9NQB0 619 aa9.12□□□□□ -0.95
HMGCLL1-206ENST00000428842 PACSIN3Q9UKS6 424 aa9.12□□□□□ -0.95
HMGCLL1-206ENST00000428842 DYRK1BQ9Y463 629 aa9.12□□□□□ -0.95
HMGCLL1-206ENST00000428842 CNTRLQ7Z7A1 2325 aa9.12□□□□□ -0.95
HMGCLL1-206ENST00000428842 KIR2DS5A0A0G2JLQ3 304 aa9.12□□□□□ -0.95
HMGCLL1-206ENST00000428842 A0A0G2JNG1 304 aa9.12□□□□□ -0.95
HMGCLL1-206ENST00000428842 A0A1W2PS29 197 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms