RNA–Protein interactions for RNA: ENST00000427755.2

DEPDC7-203, Transcript of DEP domain containing 7, humanhuman

TSL 2

Gene DEPDC7, Length 1,212 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC7-203ENST00000427755 HSP90AA5PQ58FG0 334 aa12.34□□□□□ -0.43
DEPDC7-203ENST00000427755 MBOAT1Q6ZNC8 495 aa12.34□□□□□ -0.43
DEPDC7-203ENST00000427755 LANCL3Q6ZV70 420 aa12.34□□□□□ -0.43
DEPDC7-203ENST00000427755 CPEB2Q7Z5Q1 589 aaKnown RBP12.34□□□□□ -0.43
DEPDC7-203ENST00000427755 SLC34A3Q8N130 599 aa12.34□□□□□ -0.43
DEPDC7-203ENST00000427755 CALML6Q8TD86 181 aa12.34□□□□□ -0.43
DEPDC7-203ENST00000427755 TM4SF19Q96DZ7 209 aa12.34□□□□□ -0.43
DEPDC7-203ENST00000427755 THAP11Q96EK4 314 aa12.34□□□□□ -0.43
DEPDC7-203ENST00000427755 CYTH2Q99418 400 aa12.34□□□□□ -0.43
DEPDC7-203ENST00000427755 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.34□□□□□ -0.43
DEPDC7-203ENST00000427755 CCDC177Q9NQR7 707 aaPredicted RBP12.34□□□□□ -0.43
DEPDC7-203ENST00000427755 ABI3Q9P2A4 366 aa12.34□□□□□ -0.43
DEPDC7-203ENST00000427755 ENTPD4Q9Y227 616 aa12.34□□□□□ -0.43
DEPDC7-203ENST00000427755 PPP2R2CQ9Y2T4 447 aa12.34□□□□□ -0.43
DEPDC7-203ENST00000427755 MAD1L1Q9Y6D9 718 aa12.34□□□□□ -0.43
DEPDC7-203ENST00000427755 CROCCQ5TZA2 2017 aa12.33□□□□□ -0.43
DEPDC7-203ENST00000427755 FEZF1A0PJY2 475 aa12.33□□□□□ -0.44
DEPDC7-203ENST00000427755 OR5H15A6NDH6 313 aa12.33□□□□□ -0.44
DEPDC7-203ENST00000427755 OR2W5A6NFC9 320 aa12.33□□□□□ -0.44
DEPDC7-203ENST00000427755 LCMT2O60294 686 aaKnown RBP12.33□□□□□ -0.44
DEPDC7-203ENST00000427755 PRAMEF2O60811 474 aa12.33□□□□□ -0.44
DEPDC7-203ENST00000427755 WISP2O76076 250 aa12.33□□□□□ -0.44
DEPDC7-203ENST00000427755 SEC24DO94855 1032 aaPredicted RBP12.33□□□□□ -0.44
DEPDC7-203ENST00000427755 PRF1P14222 555 aa12.33□□□□□ -0.44
DEPDC7-203ENST00000427755 IL1RNP18510 177 aa12.33□□□□□ -0.44
DEPDC7-203ENST00000427755 GABRB3P28472 473 aa12.33□□□□□ -0.44
DEPDC7-203ENST00000427755 AP2B1P63010 937 aa12.33□□□□□ -0.44
DEPDC7-203ENST00000427755 SRSF11Q05519 484 aaKnown RBP12.33□□□□□ -0.44
DEPDC7-203ENST00000427755 PTK6Q13882 451 aa12.33□□□□□ -0.44
DEPDC7-203ENST00000427755 ZXDCQ2QGD7 858 aaPredicted RBP12.33□□□□□ -0.44
DEPDC7-203ENST00000427755 ABHD17BQ5VST6 288 aa12.33□□□□□ -0.44
DEPDC7-203ENST00000427755 PLAG1Q6DJT9 500 aa12.33□□□□□ -0.44
DEPDC7-203ENST00000427755 H3F3CQ6NXT2 135 aa12.33□□□□□ -0.44
DEPDC7-203ENST00000427755 CCDC137Q6PK04 289 aaKnown RBP12.33□□□□□ -0.44
DEPDC7-203ENST00000427755 PCGF5Q86SE9 256 aa12.33□□□□□ -0.44
DEPDC7-203ENST00000427755 PDSS2Q86YH6 399 aa12.33□□□□□ -0.44
DEPDC7-203ENST00000427755 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.33□□□□□ -0.44
DEPDC7-203ENST00000427755 C2CD4AQ8NCU7 369 aaPredicted RBP12.33□□□□□ -0.44
DEPDC7-203ENST00000427755 OR51Q1Q8NH59 317 aa12.33□□□□□ -0.44
DEPDC7-203ENST00000427755 EEF1AKMT1Q8WVE0 214 aa12.33□□□□□ -0.44
DEPDC7-203ENST00000427755 METTL21AQ8WXB1 218 aa12.33□□□□□ -0.44
DEPDC7-203ENST00000427755 PBKQ96KB5 322 aa12.33□□□□□ -0.44
DEPDC7-203ENST00000427755 CCDC138Q96M89 665 aa12.33□□□□□ -0.44
DEPDC7-203ENST00000427755 NDNQ99608 321 aa12.33□□□□□ -0.44
DEPDC7-203ENST00000427755 FAM167BQ9BTA0 163 aa12.33□□□□□ -0.44
DEPDC7-203ENST00000427755 SGPP1Q9BX95 441 aa12.33□□□□□ -0.44
DEPDC7-203ENST00000427755 PCBD2Q9H0N5 130 aa12.33□□□□□ -0.44
DEPDC7-203ENST00000427755 IARS2Q9NSE4 1012 aaKnown RBP12.33□□□□□ -0.44
DEPDC7-203ENST00000427755 STMN3Q9NZ72 180 aa12.33□□□□□ -0.44
DEPDC7-203ENST00000427755 HCN3Q9P1Z3 774 aa12.33□□□□□ -0.44
DEPDC7-203ENST00000427755 ITPR2Q14571 2701 aa12.32□□□□□ -0.44
DEPDC7-203ENST00000427755 SGK494L7N484 410 aa12.32□□□□□ -0.44
DEPDC7-203ENST00000427755 HNRNPRO43390 633 aaKnown RBP12.32□□□□□ -0.44
DEPDC7-203ENST00000427755 RASAL1O95294 804 aa12.32□□□□□ -0.44
DEPDC7-203ENST00000427755 TSPAN12O95859 305 aa12.32□□□□□ -0.44
DEPDC7-203ENST00000427755 C8GP07360 202 aa12.32□□□□□ -0.44
DEPDC7-203ENST00000427755 XCR1P46094 333 aa12.32□□□□□ -0.44
DEPDC7-203ENST00000427755 ZNF33BQ06732 778 aa12.32□□□□□ -0.44
DEPDC7-203ENST00000427755 NAE1Q13564 534 aa12.32□□□□□ -0.44
DEPDC7-203ENST00000427755 CRYMQ14894 314 aa12.32□□□□□ -0.44
DEPDC7-203ENST00000427755 PHKG1Q16816 387 aa12.32□□□□□ -0.44
DEPDC7-203ENST00000427755 MINDY4Q4G0A6 757 aa12.32□□□□□ -0.44
DEPDC7-203ENST00000427755 RNASEH2BQ5TBB1 312 aaKnown RBP12.32□□□□□ -0.44
DEPDC7-203ENST00000427755 AGTRAPQ6RW13 159 aa12.32□□□□□ -0.44
DEPDC7-203ENST00000427755 PAQR3Q6TCH7 311 aa12.32□□□□□ -0.44
DEPDC7-203ENST00000427755 GFRALQ6UXV0 394 aa12.32□□□□□ -0.44
DEPDC7-203ENST00000427755 ANKRD37Q7Z713 158 aa12.32□□□□□ -0.44
DEPDC7-203ENST00000427755 KCT2Q8NC54 265 aa12.32□□□□□ -0.44
DEPDC7-203ENST00000427755 CAMKVQ8NCB2 501 aa12.32□□□□□ -0.44
DEPDC7-203ENST00000427755 DNAJB8Q8NHS0 232 aa12.32□□□□□ -0.44
DEPDC7-203ENST00000427755 MCOLN3Q8TDD5 553 aa12.32□□□□□ -0.44
DEPDC7-203ENST00000427755 ITLN2Q8WWU7 325 aaPredicted RBP12.32□□□□□ -0.44
DEPDC7-203ENST00000427755 ATG10Q9H0Y0 220 aa12.32□□□□□ -0.44
DEPDC7-203ENST00000427755 PARVBQ9HBI1 364 aa12.32□□□□□ -0.44
DEPDC7-203ENST00000427755 TRMT6Q9UJA5 497 aaKnown RBP12.32□□□□□ -0.44
DEPDC7-203ENST00000427755 JRKLQ9Y4A0 524 aa12.32□□□□□ -0.44
DEPDC7-203ENST00000427755 MDC1Q14676 2089 aaKnown RBP12.32□□□□□ -0.44
DEPDC7-203ENST00000427755 CREBBPQ92793 2442 aa12.31□□□□□ -0.44
DEPDC7-203ENST00000427755 CACNA1DQ01668 2161 aa12.31□□□□□ -0.44
DEPDC7-203ENST00000427755 ENO4A6NNW6 628 aa12.31□□□□□ -0.44
DEPDC7-203ENST00000427755 SLC16A5O15375 505 aa12.31□□□□□ -0.44
DEPDC7-203ENST00000427755 RDH16O75452 317 aa12.31□□□□□ -0.44
DEPDC7-203ENST00000427755 UNC5CO95185 931 aa12.31□□□□□ -0.44
DEPDC7-203ENST00000427755 CRYABP02511 175 aaKnown RBP12.31□□□□□ -0.44
DEPDC7-203ENST00000427755 UQCRHP07919 91 aa12.31□□□□□ -0.44
DEPDC7-203ENST00000427755 CDH1P12830 882 aa12.31□□□□□ -0.44
DEPDC7-203ENST00000427755 NPPBP16860 134 aa12.31□□□□□ -0.44
DEPDC7-203ENST00000427755 PGAM1P18669 254 aa12.31□□□□□ -0.44
DEPDC7-203ENST00000427755 CDKN2DP55273 166 aa12.31□□□□□ -0.44
DEPDC7-203ENST00000427755 DHX9Q08211 1270 aaKnown RBP12.31□□□□□ -0.44
DEPDC7-203ENST00000427755 SP140Q13342 867 aa12.31□□□□□ -0.44
DEPDC7-203ENST00000427755 BTBD16Q32M84 506 aa12.31□□□□□ -0.44
DEPDC7-203ENST00000427755 RBM20Q5T481 1227 aaKnown RBP12.31□□□□□ -0.44
DEPDC7-203ENST00000427755 FCRLBQ6BAA4 426 aa12.31□□□□□ -0.44
DEPDC7-203ENST00000427755 SP5Q6BEB4 398 aaPredicted RBP12.31□□□□□ -0.44
DEPDC7-203ENST00000427755 LRRC8EQ6NSJ5 796 aa12.31□□□□□ -0.44
DEPDC7-203ENST00000427755 UGT3A1Q6NUS8 523 aa12.31□□□□□ -0.44
DEPDC7-203ENST00000427755 LCTLQ6UWM7 567 aa12.31□□□□□ -0.44
DEPDC7-203ENST00000427755 ASPGQ86U10 573 aa12.31□□□□□ -0.44
DEPDC7-203ENST00000427755 SLC26A11Q86WA9 606 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms