RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 ZNF304Q9HCX3 659 aa12.11□□□□□ -0.47
SGCE-203ENST00000425444 CTSFQ9UBX1 484 aa12.11□□□□□ -0.47
SGCE-203ENST00000425444 PDE10AQ9Y233 779 aa12.11□□□□□ -0.47
SGCE-203ENST00000425444 PCSK5Q92824 1860 aa12.1□□□□□ -0.47
SGCE-203ENST00000425444 HAT1O14929 419 aa12.1□□□□□ -0.47
SGCE-203ENST00000425444 PRPF4O43172 522 aaKnown RBP eCLIP12.1□□□□□ -0.472e-6■■■■□ 25.8
SGCE-203ENST00000425444 RAD51CO43502 376 aa12.1□□□□□ -0.47
SGCE-203ENST00000425444 ANXA5P08758 320 aa12.1□□□□□ -0.47
SGCE-203ENST00000425444 FDXRP22570 491 aa12.1□□□□□ -0.47
SGCE-203ENST00000425444 CCND1P24385 295 aa12.1□□□□□ -0.47
SGCE-203ENST00000425444 GLRBP48167 497 aa12.1□□□□□ -0.47
SGCE-203ENST00000425444 PGGT1BP53609 377 aa12.1□□□□□ -0.47
SGCE-203ENST00000425444 ETF1P62495 437 aaKnown RBP12.1□□□□□ -0.47
SGCE-203ENST00000425444 OCA2Q04671 838 aa12.1□□□□□ -0.47
SGCE-203ENST00000425444 NAE1Q13564 534 aa12.1□□□□□ -0.47
SGCE-203ENST00000425444 FRG1Q14331 258 aaKnown RBP12.1□□□□□ -0.47
SGCE-203ENST00000425444 NKG7Q16617 165 aa12.1□□□□□ -0.47
SGCE-203ENST00000425444 HKDC1Q2TB90 917 aa12.1□□□□□ -0.47
SGCE-203ENST00000425444 ZNF425Q6IV72 752 aa12.1□□□□□ -0.47
SGCE-203ENST00000425444 FBXO42Q6P3S6 717 aa12.1□□□□□ -0.47
SGCE-203ENST00000425444 AGTRAPQ6RW13 159 aa12.1□□□□□ -0.47
SGCE-203ENST00000425444 PPP1R32Q7Z5V6 425 aa12.1□□□□□ -0.47
SGCE-203ENST00000425444 STRA8Q7Z7C7 330 aa12.1□□□□□ -0.47
SGCE-203ENST00000425444 PLD3Q8IV08 490 aa12.1□□□□□ -0.47
SGCE-203ENST00000425444 LRRC56Q8IYG6 542 aaPredicted RBP12.1□□□□□ -0.47
SGCE-203ENST00000425444 PYROXD1Q8WU10 500 aa12.1□□□□□ -0.47
SGCE-203ENST00000425444 C10orf90Q96M02 699 aa12.1□□□□□ -0.47
SGCE-203ENST00000425444 SPSB2Q99619 263 aa12.1□□□□□ -0.47
SGCE-203ENST00000425444 SMAD5Q99717 465 aaKnown RBP12.1□□□□□ -0.47
SGCE-203ENST00000425444 OLFM1Q99784 485 aa12.1□□□□□ -0.47
SGCE-203ENST00000425444 ERP44Q9BS26 406 aa12.1□□□□□ -0.47
SGCE-203ENST00000425444 CRB3Q9BUF7 120 aa12.1□□□□□ -0.47
SGCE-203ENST00000425444 YIPF2Q9BWQ6 316 aa12.1□□□□□ -0.47
SGCE-203ENST00000425444 TRIM54Q9BYV2 358 aa12.1□□□□□ -0.47
SGCE-203ENST00000425444 PCBD2Q9H0N5 130 aa12.1□□□□□ -0.47
SGCE-203ENST00000425444 ATG10Q9H0Y0 220 aa12.1□□□□□ -0.47
SGCE-203ENST00000425444 SLC26A1Q9H2B4 701 aa12.1□□□□□ -0.47
SGCE-203ENST00000425444 WDR54Q9H977 334 aa12.1□□□□□ -0.47
SGCE-203ENST00000425444 ENAMQ9NRM1 1142 aa12.1□□□□□ -0.47
SGCE-203ENST00000425444 AGPAT4Q9NRZ5 378 aa12.1□□□□□ -0.47
SGCE-203ENST00000425444 P4HTMQ9NXG6 502 aa12.1□□□□□ -0.47
SGCE-203ENST00000425444 ARL15Q9NXU5 204 aa12.1□□□□□ -0.47
SGCE-203ENST00000425444 NSMCE4AQ9NXX6 385 aa12.1□□□□□ -0.47
SGCE-203ENST00000425444 WHRNQ9P202 907 aa12.1□□□□□ -0.47
SGCE-203ENST00000425444 CDC14AQ9UNH5 594 aa12.1□□□□□ -0.47
SGCE-203ENST00000425444 RUVBL1Q9Y265 456 aaKnown RBP12.1□□□□□ -0.47
SGCE-203ENST00000425444 NTNG1Q9Y2I2 539 aa12.1□□□□□ -0.47
SGCE-203ENST00000425444 VWA7Q9Y334 891 aa12.1□□□□□ -0.47
SGCE-203ENST00000425444 UTP11Q9Y3A2 253 aaKnown RBP12.1□□□□□ -0.47
SGCE-203ENST00000425444 NBEAL1Q6ZS30 2694 aa12.09□□□□□ -0.47
SGCE-203ENST00000425444 FAM95CA0A1B0GW59 222 aa12.09□□□□□ -0.47
SGCE-203ENST00000425444 E7ESA3 106 aa12.09□□□□□ -0.47
SGCE-203ENST00000425444 H7BY64 318 aa12.09□□□□□ -0.47
SGCE-203ENST00000425444 TXNDC9O14530 226 aa12.09□□□□□ -0.47
SGCE-203ENST00000425444 TP73O15350 636 aa12.09□□□□□ -0.47
SGCE-203ENST00000425444 MED26O95402 600 aa12.09□□□□□ -0.47
SGCE-203ENST00000425444 COX6B1P14854 86 aa12.09□□□□□ -0.47
SGCE-203ENST00000425444 HOXB4P17483 251 aaPredicted RBP12.09□□□□□ -0.47
SGCE-203ENST00000425444 HRH2P25021 359 aa12.09□□□□□ -0.47
SGCE-203ENST00000425444 ART3Q13508 389 aa12.09□□□□□ -0.47
SGCE-203ENST00000425444 RBBP7Q16576 425 aa12.09□□□□□ -0.47
SGCE-203ENST00000425444 PHKG1Q16816 387 aa12.09□□□□□ -0.47
SGCE-203ENST00000425444 PRTGQ2VWP7 1150 aa12.09□□□□□ -0.47
SGCE-203ENST00000425444 DCAF10Q5QP82 559 aa12.09□□□□□ -0.47
SGCE-203ENST00000425444 CAPN13Q6MZZ7 669 aaPredicted RBP12.09□□□□□ -0.47
SGCE-203ENST00000425444 FJX1Q86VR8 437 aa12.09□□□□□ -0.47
SGCE-203ENST00000425444 SLC26A11Q86WA9 606 aa12.09□□□□□ -0.47
SGCE-203ENST00000425444 C17orf64Q86WR6 236 aa12.09□□□□□ -0.47
SGCE-203ENST00000425444 PRSS58Q8IYP2 241 aa12.09□□□□□ -0.47
SGCE-203ENST00000425444 CDKL2Q92772 493 aa12.09□□□□□ -0.47
SGCE-203ENST00000425444 VPS50Q96JG6 964 aa12.09□□□□□ -0.47
SGCE-203ENST00000425444 PRAP1Q96NZ9 151 aa12.09□□□□□ -0.47
SGCE-203ENST00000425444 OR2A5Q96R48 311 aa12.09□□□□□ -0.47
SGCE-203ENST00000425444 BARD1Q99728 777 aaKnown RBP12.09□□□□□ -0.47
SGCE-203ENST00000425444 SAYSD1Q9NPB0 183 aa12.09□□□□□ -0.47
SGCE-203ENST00000425444 C5AR2Q9P296 337 aa12.09□□□□□ -0.47
SGCE-203ENST00000425444 TXNDC16Q9P2K2 825 aa12.09□□□□□ -0.47
SGCE-203ENST00000425444 ZNF282Q9UDV7 671 aaPredicted RBP12.09□□□□□ -0.47
SGCE-203ENST00000425444 PSAT1Q9Y617 370 aa12.09□□□□□ -0.47
SGCE-203ENST00000425444 AGPSO00116 658 aa12.08□□□□□ -0.48
SGCE-203ENST00000425444 KLHL41O60662 606 aa12.08□□□□□ -0.48
SGCE-203ENST00000425444 GUCA1CO95843 209 aa12.08□□□□□ -0.48
SGCE-203ENST00000425444 TSPAN12O95859 305 aa12.08□□□□□ -0.48
SGCE-203ENST00000425444 ONECUT2O95948 504 aa12.08□□□□□ -0.48
SGCE-203ENST00000425444 STATHP02808 62 aa12.08□□□□□ -0.48
SGCE-203ENST00000425444 ALPPP05187 535 aa12.08□□□□□ -0.48
SGCE-203ENST00000425444 ENO2P09104 434 aaPredicted RBP12.08□□□□□ -0.48
SGCE-203ENST00000425444 MMP11P24347 488 aa12.08□□□□□ -0.48
SGCE-203ENST00000425444 GRK3P35626 688 aa12.08□□□□□ -0.48
SGCE-203ENST00000425444 EMP3P54852 163 aa12.08□□□□□ -0.48
SGCE-203ENST00000425444 SLC12A2P55011 1212 aa12.08□□□□□ -0.48
SGCE-203ENST00000425444 AP1S2P56377 157 aa12.08□□□□□ -0.48
SGCE-203ENST00000425444 RPS15AP62244 130 aaKnown RBP12.08□□□□□ -0.48
SGCE-203ENST00000425444 NDUFA9Q16795 377 aa12.08□□□□□ -0.48
SGCE-203ENST00000425444 VWA5B1Q5TIE3 1220 aa12.08□□□□□ -0.48
SGCE-203ENST00000425444 IRAK1BP1Q5VVH5 260 aa12.08□□□□□ -0.48
SGCE-203ENST00000425444 GARNL3Q5VVW2 1013 aa12.08□□□□□ -0.48
SGCE-203ENST00000425444 ZC3HC1Q86WB0 502 aaKnown RBP12.08□□□□□ -0.48
SGCE-203ENST00000425444 TMEM151BQ8IW70 566 aa12.08□□□□□ -0.48
SGCE-203ENST00000425444 GALNT16Q8N428 558 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms