RNA–Protein interactions for RNA: ENST00000424634.5

NUP50-207, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-207ENST00000424634 VPS50Q96JG6 964 aa17.51■□□□□ 0.39
NUP50-207ENST00000424634 ILKAPQ9H0C8 392 aaPredicted RBP17.51■□□□□ 0.39
NUP50-207ENST00000424634 PCDHGA10Q9Y5H3 936 aa17.51■□□□□ 0.39
NUP50-207ENST00000424634 A0A1W2PQ72 361 aa17.5■□□□□ 0.39
NUP50-207ENST00000424634 BLACEA4D250 179 aa17.5■□□□□ 0.39
NUP50-207ENST00000424634 E7ESA3 106 aa17.5■□□□□ 0.39
NUP50-207ENST00000424634 MAP2K7O14733 419 aa17.5■□□□□ 0.39
NUP50-207ENST00000424634 SEMA7AO75326 666 aa17.5■□□□□ 0.39
NUP50-207ENST00000424634 JRKO75564 520 aa17.5■□□□□ 0.39
NUP50-207ENST00000424634 HEXBP07686 556 aa17.5■□□□□ 0.39
NUP50-207ENST00000424634 ANXA5P08758 320 aa17.5■□□□□ 0.39
NUP50-207ENST00000424634 HIST1H2AGP0C0S8 130 aaPredicted RBP17.5■□□□□ 0.39
NUP50-207ENST00000424634 CDH1P12830 882 aa17.5■□□□□ 0.39
NUP50-207ENST00000424634 HIST1H2ADP20671 130 aa17.5■□□□□ 0.39
NUP50-207ENST00000424634 VARSP26640 1264 aaKnown RBP17.5■□□□□ 0.39
NUP50-207ENST00000424634 GLRBP48167 497 aa17.5■□□□□ 0.39
NUP50-207ENST00000424634 PDIA2Q13087 525 aaKnown RBP17.5■□□□□ 0.39
NUP50-207ENST00000424634 FHL5Q5TD97 284 aa17.5■□□□□ 0.39
NUP50-207ENST00000424634 FAM45BPQ6NSW5 357 aa17.5■□□□□ 0.39
NUP50-207ENST00000424634 KCT2Q8NC54 265 aa17.5■□□□□ 0.39
NUP50-207ENST00000424634 FBXO36Q8NEA4 188 aa17.5■□□□□ 0.39
NUP50-207ENST00000424634 OR56A3Q8NH54 315 aa17.5■□□□□ 0.39
NUP50-207ENST00000424634 FAM45AQ8TCE6 357 aa17.5■□□□□ 0.39
NUP50-207ENST00000424634 PPP4R1Q8TF05 950 aa17.5■□□□□ 0.39
NUP50-207ENST00000424634 PSMF1Q92530 271 aa17.5■□□□□ 0.39
NUP50-207ENST00000424634 HIST1H2AHQ96KK5 128 aa17.5■□□□□ 0.39
NUP50-207ENST00000424634 OR4K3Q96R72 315 aa17.5■□□□□ 0.39
NUP50-207ENST00000424634 KRT12Q99456 494 aa17.5■□□□□ 0.39
NUP50-207ENST00000424634 BARD1Q99728 777 aaKnown RBP17.5■□□□□ 0.39
NUP50-207ENST00000424634 HIST1H2AJQ99878 128 aa17.5■□□□□ 0.39
NUP50-207ENST00000424634 WDR77Q9BQA1 342 aaPredicted RBP17.5■□□□□ 0.39
NUP50-207ENST00000424634 H2AFJQ9BTM1 129 aa17.5■□□□□ 0.39
NUP50-207ENST00000424634 C14orf105Q9NVL8 296 aa17.5■□□□□ 0.39
NUP50-207ENST00000424634 ARL15Q9NXU5 204 aa17.5■□□□□ 0.39
NUP50-207ENST00000424634 MOCS1Q9NZB8 636 aa17.5■□□□□ 0.39
NUP50-207ENST00000424634 CORO1CQ9ULV4 474 aaPredicted RBP17.5■□□□□ 0.39
NUP50-207ENST00000424634 SNX24Q9Y343 169 aa17.5■□□□□ 0.39
NUP50-207ENST00000424634 SCN2AQ99250 2005 aa17.49■□□□□ 0.39
NUP50-207ENST00000424634 IGHV1-45A0A0A0MS14 117 aa17.49■□□□□ 0.39
NUP50-207ENST00000424634 EFCAB8A8MWE9 144 aa17.49■□□□□ 0.39
NUP50-207ENST00000424634 BMP10O95393 424 aa17.49■□□□□ 0.39
NUP50-207ENST00000424634 CBX6O95503 412 aa17.49■□□□□ 0.39
NUP50-207ENST00000424634 CELA2AP08217 269 aa17.49■□□□□ 0.39
NUP50-207ENST00000424634 PAFAH1B1P43034 410 aa17.49■□□□□ 0.39
NUP50-207ENST00000424634 EEF1A2Q05639 463 aaKnown RBP17.49■□□□□ 0.39
NUP50-207ENST00000424634 CBLBQ13191 982 aa17.49■□□□□ 0.39
NUP50-207ENST00000424634 NR6A1Q15406 480 aa17.49■□□□□ 0.39
NUP50-207ENST00000424634 NDUFA9Q16795 377 aa17.49■□□□□ 0.39
NUP50-207ENST00000424634 IRAK1BP1Q5VVH5 260 aa17.49■□□□□ 0.39
NUP50-207ENST00000424634 DUPD1Q68J44 220 aa17.49■□□□□ 0.39
NUP50-207ENST00000424634 TMEM214Q6NUQ4 689 aaKnown RBP17.49■□□□□ 0.39
NUP50-207ENST00000424634 TMEM205Q6UW68 189 aa17.49■□□□□ 0.39
NUP50-207ENST00000424634 LINC00696Q6ZRV3 163 aa17.49■□□□□ 0.39
NUP50-207ENST00000424634 SLC26A11Q86WA9 606 aa17.49■□□□□ 0.39
NUP50-207ENST00000424634 DNAJB14Q8TBM8 379 aa17.49■□□□□ 0.39
NUP50-207ENST00000424634 THAP11Q96EK4 314 aa17.49■□□□□ 0.39
NUP50-207ENST00000424634 PDLIM5Q96HC4 596 aaKnown RBP17.49■□□□□ 0.39
NUP50-207ENST00000424634 MKL2Q9ULH7 1088 aa17.49■□□□□ 0.39
NUP50-207ENST00000424634 NOVA2Q9UNW9 492 aaKnown RBP17.49■□□□□ 0.39
NUP50-207ENST00000424634 COPG1Q9Y678 874 aaKnown RBP17.49■□□□□ 0.39
NUP50-207ENST00000424634 LOC102723996A0A087X1L8 192 aa17.48■□□□□ 0.39
NUP50-207ENST00000424634 NSG1A0A0A6YYJ2 146 aa17.48■□□□□ 0.39
NUP50-207ENST00000424634 OR2W5A6NFC9 320 aa17.48■□□□□ 0.39
NUP50-207ENST00000424634 H0YIG0 161 aa17.48■□□□□ 0.39
NUP50-207ENST00000424634 NSA2O95478 260 aaKnown RBP17.48■□□□□ 0.39
NUP50-207ENST00000424634 PRR35P0CG20 571 aa17.48■□□□□ 0.39
NUP50-207ENST00000424634 RNF224P0DH78 156 aa17.48■□□□□ 0.39
NUP50-207ENST00000424634 IL1RNP18510 177 aa17.48■□□□□ 0.39
NUP50-207ENST00000424634 CCND1P24385 295 aa17.48■□□□□ 0.39
NUP50-207ENST00000424634 CXCR2P25025 360 aa17.48■□□□□ 0.39
NUP50-207ENST00000424634 AVPR1BP47901 424 aa17.48■□□□□ 0.39
NUP50-207ENST00000424634 MEF2AQ02078 507 aaPredicted RBP17.48■□□□□ 0.39
NUP50-207ENST00000424634 MGAT5Q09328 741 aa17.48■□□□□ 0.39
NUP50-207ENST00000424634 CAPN13Q6MZZ7 669 aaPredicted RBP17.48■□□□□ 0.39
NUP50-207ENST00000424634 SBSNQ6UWP8 590 aa17.48■□□□□ 0.39
NUP50-207ENST00000424634 ISLR2Q6UXK2 745 aa17.48■□□□□ 0.39
NUP50-207ENST00000424634 ZC3HC1Q86WB0 502 aaKnown RBP17.48■□□□□ 0.39
NUP50-207ENST00000424634 PDSS2Q86YH6 399 aa17.48■□□□□ 0.39
NUP50-207ENST00000424634 KBTBD2Q8IY47 623 aa17.48■□□□□ 0.39
NUP50-207ENST00000424634 CATSPER1Q8NEC5 780 aa17.48■□□□□ 0.39
NUP50-207ENST00000424634 ABHD11Q8NFV4 315 aa17.48■□□□□ 0.39
NUP50-207ENST00000424634 OR4K1Q8NGD4 311 aa17.48■□□□□ 0.39
NUP50-207ENST00000424634 FBXL8Q96CD0 374 aa17.48■□□□□ 0.39
NUP50-207ENST00000424634 LMF1Q96S06 567 aa17.48■□□□□ 0.39
NUP50-207ENST00000424634 RNF14Q9UBS8 474 aa17.48■□□□□ 0.39
NUP50-207ENST00000424634 SGK494L7N484 410 aa17.47■□□□□ 0.39
NUP50-207ENST00000424634 PIAS1O75925 651 aa17.47■□□□□ 0.39
NUP50-207ENST00000424634 AGFG2O95081 481 aa17.47■□□□□ 0.39
NUP50-207ENST00000424634 GUCA1CO95843 209 aa17.47■□□□□ 0.39
NUP50-207ENST00000424634 SAT1P21673 171 aa17.47■□□□□ 0.39
NUP50-207ENST00000424634 AP1S2P56377 157 aa17.47■□□□□ 0.39
NUP50-207ENST00000424634 TAS2R39P59534 338 aa17.47■□□□□ 0.39
NUP50-207ENST00000424634 MFAP5Q13361 173 aa17.47■□□□□ 0.39
NUP50-207ENST00000424634 ZNF460Q14592 562 aa17.47■□□□□ 0.39
NUP50-207ENST00000424634 PCOLCEQ15113 449 aa17.47■□□□□ 0.39
NUP50-207ENST00000424634 PPP1R3AQ16821 1122 aa17.47■□□□□ 0.39
NUP50-207ENST00000424634 CATSPEREQ5SY80 951 aa17.47■□□□□ 0.39
NUP50-207ENST00000424634 STRA8Q7Z7C7 330 aa17.47■□□□□ 0.39
NUP50-207ENST00000424634 ASPGQ86U10 573 aa17.47■□□□□ 0.39
NUP50-207ENST00000424634 MFSD9Q8NBP5 474 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms