RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 FBXO42Q6P3S6 717 aa5.89□□□□□ -1.47
SDCBP-203ENST00000424270 LRRC8BQ6P9F7 803 aa5.89□□□□□ -1.47
SDCBP-203ENST00000424270 TTC23LQ6PF05 361 aa5.89□□□□□ -1.47
SDCBP-203ENST00000424270 GK5Q6ZS86 529 aa5.89□□□□□ -1.47
SDCBP-203ENST00000424270 TRILQ7L0X0 811 aa5.89□□□□□ -1.47
SDCBP-203ENST00000424270 ABHD13Q7L211 337 aa5.89□□□□□ -1.47
SDCBP-203ENST00000424270 TAS2R42Q7RTR8 314 aa5.89□□□□□ -1.47
SDCBP-203ENST00000424270 MDGA2Q7Z553 956 aa5.89□□□□□ -1.47
SDCBP-203ENST00000424270 PLD6Q8N2A8 252 aaKnown RBP5.89□□□□□ -1.47
SDCBP-203ENST00000424270 FBXW8Q8N3Y1 598 aa5.89□□□□□ -1.47
SDCBP-203ENST00000424270 FAM109AQ8N4B1 249 aa5.89□□□□□ -1.47
SDCBP-203ENST00000424270 AMER3Q8N944 861 aa5.89□□□□□ -1.47
SDCBP-203ENST00000424270 NAXEQ8NCW5 288 aa5.89□□□□□ -1.47
SDCBP-203ENST00000424270 OR5K2Q8NHB8 316 aa5.89□□□□□ -1.47
SDCBP-203ENST00000424270 SPATA22Q8NHS9 363 aa5.89□□□□□ -1.47
SDCBP-203ENST00000424270 PPP1R14CQ8TAE6 165 aa5.89□□□□□ -1.47
SDCBP-203ENST00000424270 HEXDCQ8WVB3 486 aa5.89□□□□□ -1.47
SDCBP-203ENST00000424270 GTPBP3Q969Y2 492 aaKnown RBP5.89□□□□□ -1.47
SDCBP-203ENST00000424270 ZUFSPQ96AP4 578 aa5.89□□□□□ -1.47
SDCBP-203ENST00000424270 HSPBAP1Q96EW2 488 aa5.89□□□□□ -1.47
SDCBP-203ENST00000424270 TRMT61AQ96FX7 289 aaKnown RBP5.89□□□□□ -1.47
SDCBP-203ENST00000424270 IL17FQ96PD4 163 aa5.89□□□□□ -1.47
SDCBP-203ENST00000424270 TRIB3Q96RU7 358 aa5.89□□□□□ -1.47
SDCBP-203ENST00000424270 RBCK1Q9BYM8 510 aa5.89□□□□□ -1.47
SDCBP-203ENST00000424270 TTTY12Q9BZ98 90 aa5.89□□□□□ -1.47
SDCBP-203ENST00000424270 NDST4Q9H3R1 872 aa5.89□□□□□ -1.47
SDCBP-203ENST00000424270 PCDH18Q9HCL0 1135 aa5.89□□□□□ -1.47
SDCBP-203ENST00000424270 HACD3Q9P035 362 aa5.89□□□□□ -1.47
SDCBP-203ENST00000424270 HCN3Q9P1Z3 774 aa5.89□□□□□ -1.47
SDCBP-203ENST00000424270 FBXW2Q9UKT8 454 aa5.89□□□□□ -1.47
SDCBP-203ENST00000424270 RUVBL1Q9Y265 456 aaKnown RBP5.89□□□□□ -1.47
SDCBP-203ENST00000424270 ZANQ9Y493 2812 aa5.89□□□□□ -1.47
SDCBP-203ENST00000424270 TGP01266 2768 aa5.88□□□□□ -1.47
SDCBP-203ENST00000424270 C15orf38-AP3S2A0A0A6YYH1 394 aa5.88□□□□□ -1.47
SDCBP-203ENST00000424270 A8MVJ9 347 aa5.88□□□□□ -1.47
SDCBP-203ENST00000424270 TARM1B6A8C7 271 aa5.88□□□□□ -1.47
SDCBP-203ENST00000424270 H0YGG7 62 aa5.88□□□□□ -1.47
SDCBP-203ENST00000424270 LIN7AO14910 233 aaPredicted RBP5.88□□□□□ -1.47
SDCBP-203ENST00000424270 TCF21O43680 179 aa5.88□□□□□ -1.47
SDCBP-203ENST00000424270 ALX3O95076 343 aa5.88□□□□□ -1.47
SDCBP-203ENST00000424270 RARAP10276 462 aa5.88□□□□□ -1.47
SDCBP-203ENST00000424270 OPRM1P35372 400 aa5.88□□□□□ -1.47
SDCBP-203ENST00000424270 CASP9P55211 416 aa5.88□□□□□ -1.47
SDCBP-203ENST00000424270 MLF1P58340 268 aa5.88□□□□□ -1.47
SDCBP-203ENST00000424270 ARF3P61204 181 aaPredicted RBP5.88□□□□□ -1.47
SDCBP-203ENST00000424270 POLR2FP61218 127 aaKnown RBP5.88□□□□□ -1.47
SDCBP-203ENST00000424270 TAP2Q03519 686 aa5.88□□□□□ -1.47
SDCBP-203ENST00000424270 ZBTB17Q13105 803 aa5.88□□□□□ -1.47
SDCBP-203ENST00000424270 MAMLD1Q13495 774 aa5.88□□□□□ -1.47
SDCBP-203ENST00000424270 PTPRCAPQ14761 206 aa5.88□□□□□ -1.47
SDCBP-203ENST00000424270 SF3B4Q15427 424 aaKnown RBP eCLIP5.88□□□□□ -1.476e-7■■■■■ 30.8
SDCBP-203ENST00000424270 HKDC1Q2TB90 917 aa5.88□□□□□ -1.47
SDCBP-203ENST00000424270 HSP90AA4PQ58FG1 418 aa5.88□□□□□ -1.47
SDCBP-203ENST00000424270 FAM182AQ5T1J6 154 aa5.88□□□□□ -1.47
SDCBP-203ENST00000424270 FAM47EQ6ZV65 393 aa5.88□□□□□ -1.47
SDCBP-203ENST00000424270 IL17RELQ6ZVW7 336 aa5.88□□□□□ -1.47
SDCBP-203ENST00000424270 OTOAQ7RTW8 1153 aa5.88□□□□□ -1.47
SDCBP-203ENST00000424270 ADCK2Q7Z695 626 aa5.88□□□□□ -1.47
SDCBP-203ENST00000424270 ZNF227Q86WZ6 799 aa5.88□□□□□ -1.47
SDCBP-203ENST00000424270 MEX3DQ86XN8 651 aaKnown RBP5.88□□□□□ -1.47
SDCBP-203ENST00000424270 MCOLN2Q8IZK6 566 aa5.88□□□□□ -1.47
SDCBP-203ENST00000424270 ZNF441Q8N8Z8 693 aa5.88□□□□□ -1.47
SDCBP-203ENST00000424270 PSD4Q8NDX1 1056 aa5.88□□□□□ -1.47
SDCBP-203ENST00000424270 OR2M7Q8NG81 312 aa5.88□□□□□ -1.47
SDCBP-203ENST00000424270 OR9A4Q8NGU2 314 aa5.88□□□□□ -1.47
SDCBP-203ENST00000424270 OR51Q1Q8NH59 317 aa5.88□□□□□ -1.47
SDCBP-203ENST00000424270 GSDMBQ8TAX9 411 aa5.88□□□□□ -1.47
SDCBP-203ENST00000424270 SLC22A8Q8TCC7 542 aa5.88□□□□□ -1.47
SDCBP-203ENST00000424270 DTX3LQ8TDB6 740 aa5.88□□□□□ -1.47
SDCBP-203ENST00000424270 SKA2Q8WVK7 121 aaPredicted RBP5.88□□□□□ -1.47
SDCBP-203ENST00000424270 IMP4Q96G21 291 aaKnown RBP5.88□□□□□ -1.47
SDCBP-203ENST00000424270 ZNF285Q96NJ3 590 aa5.88□□□□□ -1.47
SDCBP-203ENST00000424270 MED18Q9BUE0 208 aa5.88□□□□□ -1.47
SDCBP-203ENST00000424270 CHODLQ9H9P2 273 aa5.88□□□□□ -1.47
SDCBP-203ENST00000424270 HPF1Q9NWY4 346 aa5.88□□□□□ -1.47
SDCBP-203ENST00000424270 TRMT1Q9NXH9 659 aaKnown RBP5.88□□□□□ -1.47
SDCBP-203ENST00000424270 KLHL28Q9NXS3 571 aa5.88□□□□□ -1.47
SDCBP-203ENST00000424270 GALNT8Q9NY28 637 aa5.88□□□□□ -1.47
SDCBP-203ENST00000424270 MYO1AQ9UBC5 1043 aa5.88□□□□□ -1.47
SDCBP-203ENST00000424270 FKBPLQ9UIM3 349 aa5.88□□□□□ -1.47
SDCBP-203ENST00000424270 NFS1Q9Y697 457 aa5.88□□□□□ -1.47
SDCBP-203ENST00000424270 PHF3Q92576 2039 aaKnown RBP5.87□□□□□ -1.47
SDCBP-203ENST00000424270 TCRBV5S1A1TA0A578 114 aa5.87□□□□□ -1.47
SDCBP-203ENST00000424270 PINLYPA6NC86 204 aa5.87□□□□□ -1.47
SDCBP-203ENST00000424270 ARHGEF33A8MVX0 844 aa5.87□□□□□ -1.47
SDCBP-203ENST00000424270 TXNDC9O14530 226 aa5.87□□□□□ -1.47
SDCBP-203ENST00000424270 KIAA0513O60268 411 aa5.87□□□□□ -1.47
SDCBP-203ENST00000424270 SUSD5O60279 629 aa5.87□□□□□ -1.47
SDCBP-203ENST00000424270 ITGA10O75578 1167 aa5.87□□□□□ -1.47
SDCBP-203ENST00000424270 FTH1P02794 183 aa5.87□□□□□ -1.47
SDCBP-203ENST00000424270 CYC1P08574 325 aa5.87□□□□□ -1.47
SDCBP-203ENST00000424270 CELA3AP09093 270 aa5.87□□□□□ -1.47
SDCBP-203ENST00000424270 CTSSP25774 331 aa5.87□□□□□ -1.47
SDCBP-203ENST00000424270 IL1R2P27930 398 aa5.87□□□□□ -1.47
SDCBP-203ENST00000424270 PSMB5P28074 263 aa5.87□□□□□ -1.47
SDCBP-203ENST00000424270 CMPK1P30085 196 aa5.87□□□□□ -1.47
SDCBP-203ENST00000424270 TRHRP34981 398 aaPredicted RBP5.87□□□□□ -1.47
SDCBP-203ENST00000424270 THBS2P35442 1172 aa5.87□□□□□ -1.47
SDCBP-203ENST00000424270 SSR4P51571 173 aa5.87□□□□□ -1.47
SDCBP-203ENST00000424270 ADARP55265 1226 aaKnown RBP5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms