RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 CXorf21Q9HAI6 301 aa11.5□□□□□ -0.57
PTPRN-204ENST00000423636 TPT1P8Q9HAU6 139 aa11.5□□□□□ -0.57
PTPRN-204ENST00000423636 IMP3Q9NV31 184 aaKnown RBP11.5□□□□□ -0.57
PTPRN-204ENST00000423636 WDR70Q9NW82 654 aa11.5□□□□□ -0.57
PTPRN-204ENST00000423636 ARID1BQ8NFD5 2236 aaPredicted RBP11.49□□□□□ -0.57
PTPRN-204ENST00000423636 EVPLLA8MZ36 301 aa11.49□□□□□ -0.57
PTPRN-204ENST00000423636 TRMUO75648 421 aaKnown RBP11.49□□□□□ -0.57
PTPRN-204ENST00000423636 VIPP01282 170 aa11.49□□□□□ -0.57
PTPRN-204ENST00000423636 ALPLP05186 524 aa11.49□□□□□ -0.57
PTPRN-204ENST00000423636 ADRB3P13945 408 aa11.49□□□□□ -0.57
PTPRN-204ENST00000423636 NPPBP16860 134 aa11.49□□□□□ -0.57
PTPRN-204ENST00000423636 ZNF182P17025 639 aaPredicted RBP11.49□□□□□ -0.57
PTPRN-204ENST00000423636 CD72P21854 359 aa11.49□□□□□ -0.57
PTPRN-204ENST00000423636 WNT3P56703 355 aa11.49□□□□□ -0.57
PTPRN-204ENST00000423636 HBA1P69905 142 aa11.49□□□□□ -0.57
PTPRN-204ENST00000423636 C2orf80Q0P641 193 aa11.49□□□□□ -0.57
PTPRN-204ENST00000423636 RAPSNQ13702 412 aa11.49□□□□□ -0.57
PTPRN-204ENST00000423636 GPR153Q6NV75 609 aa11.49□□□□□ -0.57
PTPRN-204ENST00000423636 TNFAIP8L2Q6P589 184 aaPredicted RBP11.49□□□□□ -0.57
PTPRN-204ENST00000423636 ABRAXAS1Q6UWZ7 409 aa11.49□□□□□ -0.57
PTPRN-204ENST00000423636 CYP4Z1Q86W10 505 aa11.49□□□□□ -0.57
PTPRN-204ENST00000423636 PROSER1Q86XN7 944 aa11.49□□□□□ -0.57
PTPRN-204ENST00000423636 ATG16L2Q8NAA4 619 aa11.49□□□□□ -0.57
PTPRN-204ENST00000423636 SNRNP27Q8WVK2 155 aaKnown RBP11.49□□□□□ -0.57
PTPRN-204ENST00000423636 FOPNLQ96NB1 174 aa11.49□□□□□ -0.57
PTPRN-204ENST00000423636 FCRL4Q96PJ5 515 aa11.49□□□□□ -0.57
PTPRN-204ENST00000423636 CPPED1Q9BRF8 314 aaPredicted RBP11.49□□□□□ -0.57
PTPRN-204ENST00000423636 PBX4Q9BYU1 374 aa11.49□□□□□ -0.57
PTPRN-204ENST00000423636 PDP1Q9P0J1 537 aaPredicted RBP11.49□□□□□ -0.57
PTPRN-204ENST00000423636 RSL24D1Q9UHA3 163 aaKnown RBP11.49□□□□□ -0.57
PTPRN-204ENST00000423636 TDRD6O60522 2096 aaKnown RBP11.49□□□□□ -0.57
PTPRN-204ENST00000423636 IGLV3-16A0A075B6K0 115 aa11.49□□□□□ -0.57
PTPRN-204ENST00000423636 JUPP14923 745 aa11.49□□□□□ -0.57
PTPRN-204ENST00000423636 PTPN6P29350 595 aa11.49□□□□□ -0.57
PTPRN-204ENST00000423636 DCTP40126 519 aa11.49□□□□□ -0.57
PTPRN-204ENST00000423636 NUDT6P53370 316 aa11.49□□□□□ -0.57
PTPRN-204ENST00000423636 LSAMPQ13449 338 aa11.49□□□□□ -0.57
PTPRN-204ENST00000423636 ZNF750Q32MQ0 723 aa11.49□□□□□ -0.57
PTPRN-204ENST00000423636 CPTPQ5TA50 214 aa11.49□□□□□ -0.57
PTPRN-204ENST00000423636 WDR53Q7Z5U6 358 aaPredicted RBP11.49□□□□□ -0.57
PTPRN-204ENST00000423636 PSD4Q8NDX1 1056 aa11.49□□□□□ -0.57
PTPRN-204ENST00000423636 OSCP1Q8WVF1 389 aa11.49□□□□□ -0.57
PTPRN-204ENST00000423636 SUSD6Q92537 303 aa11.49□□□□□ -0.57
PTPRN-204ENST00000423636 HSH2DQ96JZ2 352 aa11.49□□□□□ -0.57
PTPRN-204ENST00000423636 FAM129BQ96TA1 746 aa11.49□□□□□ -0.57
PTPRN-204ENST00000423636 ZSCAN5AQ9BUG6 496 aa11.49□□□□□ -0.57
PTPRN-204ENST00000423636 SIRT5Q9NXA8 310 aa11.49□□□□□ -0.57
PTPRN-204ENST00000423636 SLC6A14Q9UN76 642 aa11.49□□□□□ -0.57
PTPRN-204ENST00000423636 KIAA1671Q9BY89 1806 aa11.49□□□□□ -0.57
PTPRN-204ENST00000423636 A0A1W2PS29 197 aa11.48□□□□□ -0.57
PTPRN-204ENST00000423636 EPOPA6NHQ4 379 aa11.48□□□□□ -0.57
PTPRN-204ENST00000423636 ARNTLO00327 626 aa11.48□□□□□ -0.57
PTPRN-204ENST00000423636 NPC1O15118 1278 aa11.48□□□□□ -0.57
PTPRN-204ENST00000423636 C1orf105O95561 183 aa11.48□□□□□ -0.57
PTPRN-204ENST00000423636 CLCNKAP51800 687 aa11.48□□□□□ -0.57
PTPRN-204ENST00000423636 PRKAG1P54619 331 aa11.48□□□□□ -0.57
PTPRN-204ENST00000423636 CD47Q08722 323 aa11.48□□□□□ -0.57
PTPRN-204ENST00000423636 LAIR1Q6GTX8 287 aa11.48□□□□□ -0.57
PTPRN-204ENST00000423636 LRRC70Q7Z2Q7 622 aa11.48□□□□□ -0.57
PTPRN-204ENST00000423636 PIWIL3Q7Z3Z3 882 aaKnown RBP11.48□□□□□ -0.57
PTPRN-204ENST00000423636 SPRED1Q7Z699 444 aa11.48□□□□□ -0.57
PTPRN-204ENST00000423636 TRAM1L1Q8N609 369 aa11.48□□□□□ -0.57
PTPRN-204ENST00000423636 HSPBAP1Q96EW2 488 aa11.48□□□□□ -0.57
PTPRN-204ENST00000423636 KCNC2Q96PR1 638 aa11.48□□□□□ -0.57
PTPRN-204ENST00000423636 TBC1D14Q9P2M4 693 aa11.48□□□□□ -0.57
PTPRN-204ENST00000423636 HCN2Q9UL51 889 aa11.48□□□□□ -0.57
PTPRN-204ENST00000423636 KCNE2Q9Y6J6 123 aa11.48□□□□□ -0.57
PTPRN-204ENST00000423636 HEATR5BQ9P2D3 2071 aa11.48□□□□□ -0.57
PTPRN-204ENST00000423636 J3QRK9 145 aa11.48□□□□□ -0.57
PTPRN-204ENST00000423636 EPN2O95208 641 aa11.48□□□□□ -0.57
PTPRN-204ENST00000423636 FUCA1P04066 466 aa11.48□□□□□ -0.57
PTPRN-204ENST00000423636 P2RY2P41231 377 aa11.48□□□□□ -0.57
PTPRN-204ENST00000423636 FOXM1Q08050 763 aa11.48□□□□□ -0.57
PTPRN-204ENST00000423636 HSPB3Q12988 150 aa11.48□□□□□ -0.57
PTPRN-204ENST00000423636 COMMD6Q7Z4G1 85 aa11.48□□□□□ -0.57
PTPRN-204ENST00000423636 NELL1Q92832 810 aa11.48□□□□□ -0.57
PTPRN-204ENST00000423636 FBXL8Q96CD0 374 aa11.48□□□□□ -0.57
PTPRN-204ENST00000423636 CCDC138Q96M89 665 aa11.48□□□□□ -0.57
PTPRN-204ENST00000423636 MBOAT4Q96T53 435 aa11.48□□□□□ -0.57
PTPRN-204ENST00000423636 NPLQ9BXD5 320 aaPredicted RBP11.48□□□□□ -0.57
PTPRN-204ENST00000423636 RDH14Q9HBH5 336 aa11.48□□□□□ -0.57
PTPRN-204ENST00000423636 FAM118AQ9NWS6 357 aa11.48□□□□□ -0.57
PTPRN-204ENST00000423636 EXO1Q9UQ84 846 aaKnown RBP11.48□□□□□ -0.57
PTPRN-204ENST00000423636 WDR37Q9Y2I8 494 aa11.48□□□□□ -0.57
PTPRN-204ENST00000423636 SAMHD1Q9Y3Z3 626 aaKnown RBP11.48□□□□□ -0.57
PTPRN-204ENST00000423636 SEC16AO15027 2179 aa11.48□□□□□ -0.57
PTPRN-204ENST00000423636 SLCO2B1O94956 709 aa11.48□□□□□ -0.57
PTPRN-204ENST00000423636 KCNK5O95279 499 aa11.48□□□□□ -0.57
PTPRN-204ENST00000423636 C8orf89P0DMQ9 161 aa11.48□□□□□ -0.57
PTPRN-204ENST00000423636 CD9P21926 228 aa11.48□□□□□ -0.57
PTPRN-204ENST00000423636 ENTPD1P49961 510 aa11.48□□□□□ -0.57
PTPRN-204ENST00000423636 MAD2L1Q13257 205 aaPredicted RBP11.48□□□□□ -0.57
PTPRN-204ENST00000423636 TMED1Q13445 227 aa11.48□□□□□ -0.57
PTPRN-204ENST00000423636 INTS11Q5TA45 600 aaKnown RBP11.48□□□□□ -0.57
PTPRN-204ENST00000423636 KIAA1211LQ6NV74 962 aa11.48□□□□□ -0.57
PTPRN-204ENST00000423636 ISOC1Q96CN7 298 aa11.48□□□□□ -0.57
PTPRN-204ENST00000423636 CMTM7Q96FZ5 175 aa11.48□□□□□ -0.57
PTPRN-204ENST00000423636 TMEM245Q9H330 911 aa11.48□□□□□ -0.57
PTPRN-204ENST00000423636 DCAF13Q9NV06 445 aaKnown RBP11.48□□□□□ -0.57
PTPRN-204ENST00000423636 MRGBPQ9NV56 204 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms