RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 SARGQ9BW04 601 aa25.11■■□□□ 1.61
CDK9-202ENST00000421939 SOX17Q9H6I2 414 aaPredicted RBP25.11■■□□□ 1.61
CDK9-202ENST00000421939 ZNF71Q9NQZ8 489 aaPredicted RBP25.11■■□□□ 1.61
CDK9-202ENST00000421939 ZNF282Q9UDV7 671 aaPredicted RBP25.11■■□□□ 1.61
CDK9-202ENST00000421939 NFU1Q9UMS0 254 aa25.11■■□□□ 1.61
CDK9-202ENST00000421939 KCNE2Q9Y6J6 123 aa25.11■■□□□ 1.61
CDK9-202ENST00000421939 TRBC2A0A5B9 178 aa25.1■■□□□ 1.61
CDK9-202ENST00000421939 PEX12O00623 359 aa25.1■■□□□ 1.61
CDK9-202ENST00000421939 FOXS1O43638 330 aa25.1■■□□□ 1.61
CDK9-202ENST00000421939 LCMT2O60294 686 aaKnown RBP25.1■■□□□ 1.61
CDK9-202ENST00000421939 WDR47O94967 919 aa25.1■■□□□ 1.61
CDK9-202ENST00000421939 SLC6A12P48065 614 aa25.1■■□□□ 1.61
CDK9-202ENST00000421939 OCA2Q04671 838 aa25.1■■□□□ 1.61
CDK9-202ENST00000421939 C18orf21Q32NC0 220 aaPredicted RBP25.1■■□□□ 1.61
CDK9-202ENST00000421939 CDKL4Q5MAI5 379 aa25.1■■□□□ 1.61
CDK9-202ENST00000421939 SHISA6Q6ZSJ9 500 aa25.1■■□□□ 1.61
CDK9-202ENST00000421939 TMPRSS11BQ86T26 416 aa25.1■■□□□ 1.61
CDK9-202ENST00000421939 TBC1D19Q8N5T2 526 aa25.1■■□□□ 1.61
CDK9-202ENST00000421939 STT3BQ8TCJ2 826 aa25.1■■□□□ 1.61
CDK9-202ENST00000421939 TM4SF19Q96DZ7 209 aa25.1■■□□□ 1.61
CDK9-202ENST00000421939 MMABQ96EY8 250 aaPredicted RBP25.1■■□□□ 1.61
CDK9-202ENST00000421939 MACROD1Q9BQ69 325 aa25.1■■□□□ 1.61
CDK9-202ENST00000421939 PELI2Q9HAT8 420 aa25.1■■□□□ 1.61
CDK9-202ENST00000421939 WWOXQ9NZC7 414 aa25.1■■□□□ 1.61
CDK9-202ENST00000421939 TP53TG5Q9Y2B4 290 aa25.1■■□□□ 1.61
CDK9-202ENST00000421939 MRPS2Q9Y399 296 aaKnown RBP25.1■■□□□ 1.61
CDK9-202ENST00000421939 A0A0A6YYC8 382 aaPredicted RBP25.09■■□□□ 1.61
CDK9-202ENST00000421939 HMX2A2RU54 273 aa25.09■■□□□ 1.61
CDK9-202ENST00000421939 I3L1I5 382 aaPredicted RBP25.09■■□□□ 1.61
CDK9-202ENST00000421939 RHOXF2BP0C7M4 288 aa25.09■■□□□ 1.61
CDK9-202ENST00000421939 SLC35G6P0C7Q6 338 aa25.09■■□□□ 1.61
CDK9-202ENST00000421939 MMP11P24347 488 aa25.09■■□□□ 1.61
CDK9-202ENST00000421939 CCL11P51671 97 aa25.09■■□□□ 1.61
CDK9-202ENST00000421939 REEP5Q00765 189 aa25.09■■□□□ 1.61
CDK9-202ENST00000421939 DLG1Q12959 904 aa25.09■■□□□ 1.61
CDK9-202ENST00000421939 TMEM214Q6NUQ4 689 aaKnown RBP25.09■■□□□ 1.61
CDK9-202ENST00000421939 TCTN3Q6NUS6 607 aa25.09■■□□□ 1.61
CDK9-202ENST00000421939 CCDC91Q7Z6B0 441 aa25.09■■□□□ 1.61
CDK9-202ENST00000421939 AMER3Q8N944 861 aa25.09■■□□□ 1.61
CDK9-202ENST00000421939 PDPRQ8NCN5 879 aa25.09■■□□□ 1.61
CDK9-202ENST00000421939 SLC13A3Q8WWT9 602 aa25.09■■□□□ 1.61
CDK9-202ENST00000421939 NACC2Q96BF6 587 aa25.09■■□□□ 1.61
CDK9-202ENST00000421939 MIEF2Q96C03 454 aa25.09■■□□□ 1.61
CDK9-202ENST00000421939 RHOXF2Q9BQY4 288 aa25.09■■□□□ 1.61
CDK9-202ENST00000421939 SPNS1Q9H2V7 528 aa25.09■■□□□ 1.61
CDK9-202ENST00000421939 ALG9Q9H6U8 611 aa25.09■■□□□ 1.61
CDK9-202ENST00000421939 NMRAL1Q9HBL8 299 aa25.09■■□□□ 1.61
CDK9-202ENST00000421939 SNX15Q9NRS6 342 aa25.09■■□□□ 1.61
CDK9-202ENST00000421939 P4HTMQ9NXG6 502 aa25.09■■□□□ 1.61
CDK9-202ENST00000421939 TRPC4Q9UBN4 977 aa25.09■■□□□ 1.61
CDK9-202ENST00000421939 RNF112Q9ULX5 631 aa25.09■■□□□ 1.61
CDK9-202ENST00000421939 HEMK1Q9Y5R4 338 aaPredicted RBP25.09■■□□□ 1.61
CDK9-202ENST00000421939 MED13Q9UHV7 2174 aa25.09■■□□□ 1.61
CDK9-202ENST00000421939 IGLV3-12A0A075B6K2 115 aa25.08■■□□□ 1.61
CDK9-202ENST00000421939 OR1F1O43749 312 aa25.08■■□□□ 1.61
CDK9-202ENST00000421939 IPO13O94829 963 aaKnown RBP25.08■■□□□ 1.61
CDK9-202ENST00000421939 IGHEP01854 428 aa25.08■■□□□ 1.61
CDK9-202ENST00000421939 LTA4HP09960 611 aaKnown RBP25.08■■□□□ 1.61
CDK9-202ENST00000421939 ZGLP1P0C6A0 271 aa25.08■■□□□ 1.61
CDK9-202ENST00000421939 TFEBP19484 476 aa25.08■■□□□ 1.61
CDK9-202ENST00000421939 SLC26A3P40879 764 aa25.08■■□□□ 1.61
CDK9-202ENST00000421939 SERPINB8P50452 374 aa25.08■■□□□ 1.61
CDK9-202ENST00000421939 SNRPNP63162 240 aaKnown RBP25.08■■□□□ 1.61
CDK9-202ENST00000421939 SULT1C3Q6IMI6 304 aa25.08■■□□□ 1.61
CDK9-202ENST00000421939 NXPE4Q6UWF7 544 aa25.08■■□□□ 1.61
CDK9-202ENST00000421939 ZNF605Q86T29 641 aa25.08■■□□□ 1.61
CDK9-202ENST00000421939 PRSS58Q8IYP2 241 aa25.08■■□□□ 1.61
CDK9-202ENST00000421939 LRRN4CLQ8ND94 238 aa25.08■■□□□ 1.61
CDK9-202ENST00000421939 ZNF740Q8NDX6 193 aa25.08■■□□□ 1.61
CDK9-202ENST00000421939 SLC44A1Q8WWI5 657 aa25.08■■□□□ 1.61
CDK9-202ENST00000421939 EXT2Q93063 718 aa25.08■■□□□ 1.61
CDK9-202ENST00000421939 FER1L6-AS2Q96M78 137 aa25.08■■□□□ 1.61
CDK9-202ENST00000421939 TMEM79Q9BSE2 394 aa25.08■■□□□ 1.61
CDK9-202ENST00000421939 CRB3Q9BUF7 120 aa25.08■■□□□ 1.61
CDK9-202ENST00000421939 CNOT10Q9H9A5 744 aaKnown RBP25.08■■□□□ 1.61
CDK9-202ENST00000421939 IGSF5Q9NSI5 407 aa25.08■■□□□ 1.61
CDK9-202ENST00000421939 CD274Q9NZQ7 290 aa25.08■■□□□ 1.61
CDK9-202ENST00000421939 ACOT9Q9Y305 439 aa25.08■■□□□ 1.61
CDK9-202ENST00000421939 A0A087X1B8 175 aa25.07■■□□□ 1.6
CDK9-202ENST00000421939 S100BP04271 92 aaPredicted RBP25.07■■□□□ 1.6
CDK9-202ENST00000421939 INHBAP08476 426 aa25.07■■□□□ 1.6
CDK9-202ENST00000421939 NR1D1P20393 614 aa25.07■■□□□ 1.6
CDK9-202ENST00000421939 GDF5P43026 501 aa25.07■■□□□ 1.6
CDK9-202ENST00000421939 AVPR1BP47901 424 aa25.07■■□□□ 1.6
CDK9-202ENST00000421939 CSRP3P50461 194 aa25.07■■□□□ 1.6
CDK9-202ENST00000421939 CDC16Q13042 620 aa25.07■■□□□ 1.6
CDK9-202ENST00000421939 PTRH1Q86Y79 214 aaKnown RBP25.07■■□□□ 1.6
CDK9-202ENST00000421939 OR9A4Q8NGU2 314 aa25.07■■□□□ 1.6
CDK9-202ENST00000421939 ZCCHC10Q8TBK6 192 aa25.07■■□□□ 1.6
CDK9-202ENST00000421939 STAG3L4Q8TBR4 150 aa25.07■■□□□ 1.6
CDK9-202ENST00000421939 AIF1LQ9BQI0 150 aa25.07■■□□□ 1.6
CDK9-202ENST00000421939 SLC25A23Q9BV35 468 aa25.07■■□□□ 1.6
CDK9-202ENST00000421939 SEMA3GQ9NS98 782 aa25.07■■□□□ 1.6
CDK9-202ENST00000421939 C14orf105Q9NVL8 296 aa25.07■■□□□ 1.6
CDK9-202ENST00000421939 MAP4K5Q9Y4K4 846 aa25.07■■□□□ 1.6
CDK9-202ENST00000421939 PCDHGA9Q9Y5G4 932 aaKnown RBP25.07■■□□□ 1.6
CDK9-202ENST00000421939 HS3ST3B1Q9Y662 390 aa25.07■■□□□ 1.6
CDK9-202ENST00000421939 K7EM74 188 aa25.06■■□□□ 1.6
CDK9-202ENST00000421939 FFAR3O14843 346 aa25.06■■□□□ 1.6
CDK9-202ENST00000421939 GPR42O15529 346 aa25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms