RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 TTYH3Q9C0H2 523 aa4.73□□□□□ -1.65
SFXN1-202ENST00000421887 MAGEF1Q9HAY2 307 aa4.73□□□□□ -1.65
SFXN1-202ENST00000421887 SARS2Q9NP81 518 aaKnown RBP4.73□□□□□ -1.65
SFXN1-202ENST00000421887 WASH6PQ9NQA3 447 aa4.73□□□□□ -1.65
SFXN1-202ENST00000421887 OLAHQ9NV23 265 aa4.73□□□□□ -1.65
SFXN1-202ENST00000421887 EXOC1Q9NV70 894 aa4.73□□□□□ -1.65
SFXN1-202ENST00000421887 SIDT1Q9NXL6 827 aaKnown RBP4.73□□□□□ -1.65
SFXN1-202ENST00000421887 CORO2BQ9UQ03 480 aa4.73□□□□□ -1.65
SFXN1-202ENST00000421887 NTNG1Q9Y2I2 539 aa4.73□□□□□ -1.65
SFXN1-202ENST00000421887 NIPBLQ6KC79 2804 aaeCLIP4.73□□□□□ -1.65
SFXN1-202ENST00000421887 CACNA1CQ13936 2221 aa4.73□□□□□ -1.65
SFXN1-202ENST00000421887 PEX12O00623 359 aa4.72□□□□□ -1.65
SFXN1-202ENST00000421887 DSCR3O14972 297 aa4.72□□□□□ -1.65
SFXN1-202ENST00000421887 KPNA5O15131 536 aa4.72□□□□□ -1.65
SFXN1-202ENST00000421887 GRAP2O75791 330 aa4.72□□□□□ -1.65
SFXN1-202ENST00000421887 ZMPSTE24O75844 475 aa4.72□□□□□ -1.65
SFXN1-202ENST00000421887 PIGNO95427 931 aa4.72□□□□□ -1.65
SFXN1-202ENST00000421887 EPB41P11171 864 aaKnown RBP4.72□□□□□ -1.65
SFXN1-202ENST00000421887 CYP2A6P11509 494 aaPredicted RBP4.72□□□□□ -1.65
SFXN1-202ENST00000421887 TNFSF4P23510 183 aa4.72□□□□□ -1.65
SFXN1-202ENST00000421887 LIPAP38571 399 aa4.72□□□□□ -1.65
SFXN1-202ENST00000421887 MMP12P39900 470 aa4.72□□□□□ -1.65
SFXN1-202ENST00000421887 PBX1P40424 430 aa4.72□□□□□ -1.65
SFXN1-202ENST00000421887 PIK3CBP42338 1070 aa4.72□□□□□ -1.65
SFXN1-202ENST00000421887 CDKN2AP42771 156 aaKnown RBP4.72□□□□□ -1.65
SFXN1-202ENST00000421887 GPD2P43304 727 aa4.72□□□□□ -1.65
SFXN1-202ENST00000421887 RENBPP51606 427 aa4.72□□□□□ -1.65
SFXN1-202ENST00000421887 GSDMDP57764 484 aa4.72□□□□□ -1.65
SFXN1-202ENST00000421887 SNX16P57768 344 aa4.72□□□□□ -1.65
SFXN1-202ENST00000421887 CDK3Q00526 305 aa4.72□□□□□ -1.65
SFXN1-202ENST00000421887 RBPJQ06330 500 aa4.72□□□□□ -1.65
SFXN1-202ENST00000421887 EIF4EBP2Q13542 120 aaPredicted RBP4.72□□□□□ -1.65
SFXN1-202ENST00000421887 BRMS1LQ5PSV4 323 aa4.72□□□□□ -1.65
SFXN1-202ENST00000421887 C10orf25Q5T742 122 aa4.72□□□□□ -1.65
SFXN1-202ENST00000421887 CACHD1Q5VU97 1274 aa4.72□□□□□ -1.65
SFXN1-202ENST00000421887 IZUMO3Q5VZ72 239 aa4.72□□□□□ -1.65
SFXN1-202ENST00000421887 DENND2CQ68D51 928 aa4.72□□□□□ -1.65
SFXN1-202ENST00000421887 FAAH2Q6GMR7 532 aa4.72□□□□□ -1.65
SFXN1-202ENST00000421887 PWWP2BQ6NUJ5 590 aa4.72□□□□□ -1.65
SFXN1-202ENST00000421887 DOK6Q6PKX4 331 aa4.72□□□□□ -1.65
SFXN1-202ENST00000421887 GFRALQ6UXV0 394 aa4.72□□□□□ -1.65
SFXN1-202ENST00000421887 LEKR1Q6ZMV7 388 aa4.72□□□□□ -1.65
SFXN1-202ENST00000421887 Q6ZS92 163 aa4.72□□□□□ -1.65
SFXN1-202ENST00000421887 Q71RC1 249 aaPredicted RBP4.72□□□□□ -1.65
SFXN1-202ENST00000421887 BIVMQ86UB2 503 aa4.72□□□□□ -1.65
SFXN1-202ENST00000421887 CUZD1Q86UP6 607 aa4.72□□□□□ -1.65
SFXN1-202ENST00000421887 DNAAF5Q86Y56 855 aa4.72□□□□□ -1.65
SFXN1-202ENST00000421887 TMEM126BQ8IUX1 230 aa4.72□□□□□ -1.65
SFXN1-202ENST00000421887 CEP57L1Q8IYX8 460 aa4.72□□□□□ -1.65
SFXN1-202ENST00000421887 BCORP1Q8N888 145 aa4.72□□□□□ -1.65
SFXN1-202ENST00000421887 ENDOVQ8N8Q3 282 aaKnown RBP4.72□□□□□ -1.65
SFXN1-202ENST00000421887 SIDT2Q8NBJ9 832 aaKnown RBP4.72□□□□□ -1.65
SFXN1-202ENST00000421887 DNAJB14Q8TBM8 379 aa4.72□□□□□ -1.65
SFXN1-202ENST00000421887 KAT5Q92993 513 aa4.72□□□□□ -1.65
SFXN1-202ENST00000421887 CCDC47Q96A33 483 aaKnown RBP4.72□□□□□ -1.65
SFXN1-202ENST00000421887 MTFMTQ96DP5 389 aaKnown RBP4.72□□□□□ -1.65
SFXN1-202ENST00000421887 NUS1Q96E22 293 aa4.72□□□□□ -1.65
SFXN1-202ENST00000421887 ZDHHC12Q96GR4 267 aa4.72□□□□□ -1.65
SFXN1-202ENST00000421887 CNDP1Q96KN2 507 aa4.72□□□□□ -1.65
SFXN1-202ENST00000421887 C1orf74Q96LT6 269 aa4.72□□□□□ -1.65
SFXN1-202ENST00000421887 ZNF641Q96N77 438 aaPredicted RBP4.72□□□□□ -1.65
SFXN1-202ENST00000421887 IP6K3Q96PC2 410 aa4.72□□□□□ -1.65
SFXN1-202ENST00000421887 OR2M4Q96R27 311 aa4.72□□□□□ -1.65
SFXN1-202ENST00000421887 WDR77Q9BQA1 342 aaPredicted RBP4.72□□□□□ -1.65
SFXN1-202ENST00000421887 SLC7A5P2Q9GIP4 190 aa4.72□□□□□ -1.65
SFXN1-202ENST00000421887 WDR12Q9GZL7 423 aaKnown RBP4.72□□□□□ -1.65
SFXN1-202ENST00000421887 SYNCQ9H7C4 482 aa4.72□□□□□ -1.65
SFXN1-202ENST00000421887 FGF21Q9NSA1 209 aa4.72□□□□□ -1.65
SFXN1-202ENST00000421887 TMEM51Q9NW97 253 aa4.72□□□□□ -1.65
SFXN1-202ENST00000421887 SH3BGRL2Q9UJC5 107 aa4.72□□□□□ -1.65
SFXN1-202ENST00000421887 STAP1Q9ULZ2 295 aa4.72□□□□□ -1.65
SFXN1-202ENST00000421887 SMC3Q9UQE7 1217 aa4.72□□□□□ -1.65
SFXN1-202ENST00000421887 PADI2Q9Y2J8 665 aa4.72□□□□□ -1.65
SFXN1-202ENST00000421887 MFHAS1Q9Y4C4 1052 aa4.72□□□□□ -1.65
SFXN1-202ENST00000421887 PLEKHM1Q9Y4G2 1056 aa4.72□□□□□ -1.65
SFXN1-202ENST00000421887 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.72□□□□□ -1.65
SFXN1-202ENST00000421887 CCDC88CQ9P219 2028 aa4.72□□□□□ -1.65
SFXN1-202ENST00000421887 PRRC2AP48634 2157 aaKnown RBP4.71□□□□□ -1.65
SFXN1-202ENST00000421887 IGLV3-10A0A075B6K4 115 aa4.71□□□□□ -1.66
SFXN1-202ENST00000421887 KIR2DS5A0A0G2JLQ3 304 aa4.71□□□□□ -1.66
SFXN1-202ENST00000421887 A0A0G2JNG1 304 aa4.71□□□□□ -1.66
SFXN1-202ENST00000421887 OR5K4A6NMS3 321 aa4.71□□□□□ -1.66
SFXN1-202ENST00000421887 A8MX80 341 aa4.71□□□□□ -1.66
SFXN1-202ENST00000421887 POC1B-GALNT4F8VUJ3 575 aa4.71□□□□□ -1.66
SFXN1-202ENST00000421887 KIR2DS3K7RE56 304 aa4.71□□□□□ -1.66
SFXN1-202ENST00000421887 FOXN3O00409 490 aaPredicted RBP4.71□□□□□ -1.66
SFXN1-202ENST00000421887 E2F3O00716 465 aa4.71□□□□□ -1.66
SFXN1-202ENST00000421887 SLC16A6O15403 523 aa4.71□□□□□ -1.66
SFXN1-202ENST00000421887 SNX2O60749 519 aa4.71□□□□□ -1.66
SFXN1-202ENST00000421887 SCRG1O75711 98 aa4.71□□□□□ -1.66
SFXN1-202ENST00000421887 TMCC1O94876 653 aa4.71□□□□□ -1.66
SFXN1-202ENST00000421887 CLDN14O95500 239 aa4.71□□□□□ -1.66
SFXN1-202ENST00000421887 CD160O95971 181 aa4.71□□□□□ -1.66
SFXN1-202ENST00000421887 C9P02748 559 aa4.71□□□□□ -1.66
SFXN1-202ENST00000421887 IVLP07476 585 aa4.71□□□□□ -1.66
SFXN1-202ENST00000421887 RAB40ALP0C0E4 278 aa4.71□□□□□ -1.66
SFXN1-202ENST00000421887 AGAP20933 346 aa4.71□□□□□ -1.66
SFXN1-202ENST00000421887 CASP1P29466 404 aa4.71□□□□□ -1.66
SFXN1-202ENST00000421887 SERPINA4P29622 427 aa4.71□□□□□ -1.66
SFXN1-202ENST00000421887 OTX2P32243 289 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms