RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 ATP8B4Q8TF62 1192 aa2.55□□□□□ -2
VPS41-206ENST00000418457 TMEM255BQ8WV15 326 aa2.55□□□□□ -2
VPS41-206ENST00000418457 CKAP2Q8WWK9 683 aa2.55□□□□□ -2
VPS41-206ENST00000418457 LZICQ8WZA0 190 aa2.55□□□□□ -2
VPS41-206ENST00000418457 ART4Q93070 314 aa2.55□□□□□ -2
VPS41-206ENST00000418457 DNAJC19Q96DA6 116 aa2.55□□□□□ -2
VPS41-206ENST00000418457 THOC1Q96FV9 657 aaKnown RBP2.55□□□□□ -2
VPS41-206ENST00000418457 FEM1CQ96JP0 617 aa2.55□□□□□ -2
VPS41-206ENST00000418457 PLIN4Q96Q06 1357 aa2.55□□□□□ -2
VPS41-206ENST00000418457 PRMT1Q99873 361 aaKnown RBP2.55□□□□□ -2
VPS41-206ENST00000418457 NEURL2Q9BR09 285 aa2.55□□□□□ -2
VPS41-206ENST00000418457 AP1M1Q9BXS5 423 aa2.55□□□□□ -2
VPS41-206ENST00000418457 ANKRD2Q9GZV1 360 aa2.55□□□□□ -2
VPS41-206ENST00000418457 DDX47Q9H0S4 455 aaKnown RBP2.55□□□□□ -2
VPS41-206ENST00000418457 CSTL1Q9H114 145 aa2.55□□□□□ -2
VPS41-206ENST00000418457 NEUROG2Q9H2A3 272 aa2.55□□□□□ -2
VPS41-206ENST00000418457 LRMDAQ9H2I8 198 aa2.55□□□□□ -2
VPS41-206ENST00000418457 DPH5Q9H2P9 285 aa2.55□□□□□ -2
VPS41-206ENST00000418457 VCX3BQ9H321 246 aa2.55□□□□□ -2
VPS41-206ENST00000418457 HRH4Q9H3N8 390 aa2.55□□□□□ -2
VPS41-206ENST00000418457 RAD21L1Q9H4I0 556 aa2.55□□□□□ -2
VPS41-206ENST00000418457 AZI2Q9H6S1 392 aa2.55□□□□□ -2
VPS41-206ENST00000418457 DCLRE1BQ9H816 532 aa2.55□□□□□ -2
VPS41-206ENST00000418457 DNAJC18Q9H819 358 aa2.55□□□□□ -2
VPS41-206ENST00000418457 EVA1AQ9H8M9 152 aa2.55□□□□□ -2
VPS41-206ENST00000418457 RNPEPL1Q9HAU8 725 aa2.55□□□□□ -2
VPS41-206ENST00000418457 VCX3AQ9NNX9 186 aa2.55□□□□□ -2
VPS41-206ENST00000418457 ABCF3Q9NUQ8 709 aa2.55□□□□□ -2
VPS41-206ENST00000418457 PANK4Q9NVE7 773 aa2.55□□□□□ -2
VPS41-206ENST00000418457 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.55□□□□□ -2
VPS41-206ENST00000418457 CYP39A1Q9NYL5 469 aa2.55□□□□□ -2
VPS41-206ENST00000418457 SENP1Q9P0U3 644 aa2.55□□□□□ -2
VPS41-206ENST00000418457 ARMCX3Q9UH62 379 aaPredicted RBP2.55□□□□□ -2
VPS41-206ENST00000418457 AMACRQ9UHK6 382 aa2.55□□□□□ -2
VPS41-206ENST00000418457 LGALS13Q9UHV8 139 aa2.55□□□□□ -2
VPS41-206ENST00000418457 RALYQ9UKM9 306 aaKnown RBP2.55□□□□□ -2
VPS41-206ENST00000418457 PACSIN2Q9UNF0 486 aaPredicted RBP2.55□□□□□ -2
VPS41-206ENST00000418457 PROCRQ9UNN8 238 aa2.55□□□□□ -2
VPS41-206ENST00000418457 EXO1Q9UQ84 846 aaKnown RBP2.55□□□□□ -2
VPS41-206ENST00000418457 TMEM184BQ9Y519 407 aaPredicted RBP2.55□□□□□ -2
VPS41-206ENST00000418457 USH1CQ9Y6N9 552 aa2.55□□□□□ -2
VPS41-206ENST00000418457 SEC23IPQ9Y6Y8 1000 aaKnown RBP2.55□□□□□ -2
VPS41-206ENST00000418457 CDK5RAP2Q96SN8 1893 aa2.54□□□□□ -2
VPS41-206ENST00000418457 ARFGEF1Q9Y6D6 1849 aa2.54□□□□□ -2
VPS41-206ENST00000418457 COL14A1Q05707 1796 aaKnown RBP2.54□□□□□ -2
VPS41-206ENST00000418457 COL5A3P25940 1745 aaPredicted RBP2.54□□□□□ -2
VPS41-206ENST00000418457 COL24A1Q17RW2 1714 aa2.54□□□□□ -2
VPS41-206ENST00000418457 FRMPD4Q14CM0 1322 aa2.54□□□□□ -2
VPS41-206ENST00000418457 MYO3BQ8WXR4 1341 aa2.54□□□□□ -2
VPS41-206ENST00000418457 GPR75-ASB3A0A0A6YYF3 556 aa2.54□□□□□ -2
VPS41-206ENST00000418457 A0A1W2PP11 408 aa2.54□□□□□ -2
VPS41-206ENST00000418457 A0A1W2PR77 199 aa2.54□□□□□ -2
VPS41-206ENST00000418457 TMEM120BA0PK00 339 aa2.54□□□□□ -2
VPS41-206ENST00000418457 ASPDHA6ND91 283 aa2.54□□□□□ -2
VPS41-206ENST00000418457 TMEM8BA6NDV4 472 aa2.54□□□□□ -2
VPS41-206ENST00000418457 OR5K3A6NET4 321 aa2.54□□□□□ -2
VPS41-206ENST00000418457 LRRC72A6NJI9 287 aa2.54□□□□□ -2
VPS41-206ENST00000418457 A8MXQ7 604 aa2.54□□□□□ -2
VPS41-206ENST00000418457 TCP11X1B4DZS4 312 aa2.54□□□□□ -2
VPS41-206ENST00000418457 PRSS44E7EML9 344 aa2.54□□□□□ -2
VPS41-206ENST00000418457 K7ENM7 598 aa2.54□□□□□ -2
VPS41-206ENST00000418457 CTDSP2O14595 271 aa2.54□□□□□ -2
VPS41-206ENST00000418457 MAGEB2O15479 319 aa2.54□□□□□ -2
VPS41-206ENST00000418457 BUB3O43684 328 aa2.54□□□□□ -2
VPS41-206ENST00000418457 BUD23O43709 281 aaKnown RBP2.54□□□□□ -2
VPS41-206ENST00000418457 ECE2O60344 883 aa2.54□□□□□ -2
VPS41-206ENST00000418457 LDB3O75112 727 aa2.54□□□□□ -2
VPS41-206ENST00000418457 ZNF217O75362 1048 aa2.54□□□□□ -2
VPS41-206ENST00000418457 GJB3O75712 270 aa2.54□□□□□ -2
VPS41-206ENST00000418457 TTC4O95801 387 aa2.54□□□□□ -2
VPS41-206ENST00000418457 GH2P01242 217 aa2.54□□□□□ -2
VPS41-206ENST00000418457 ATP5BP06576 529 aaKnown RBP2.54□□□□□ -2
VPS41-206ENST00000418457 F7P08709 466 aaPredicted RBP2.54□□□□□ -2
VPS41-206ENST00000418457 ABHD2P08910 425 aa2.54□□□□□ -2
VPS41-206ENST00000418457 LINGO3P0C6S8 592 aa2.54□□□□□ -2
VPS41-206ENST00000418457 PLA2G4BP0C869 781 aa2.54□□□□□ -2
VPS41-206ENST00000418457 GZMAP12544 262 aa2.54□□□□□ -2
VPS41-206ENST00000418457 KRT13P13646 458 aa2.54□□□□□ -2
VPS41-206ENST00000418457 GNAZP19086 355 aa2.54□□□□□ -2
VPS41-206ENST00000418457 MUTP22033 750 aa2.54□□□□□ -2
VPS41-206ENST00000418457 HRH2P25021 359 aa2.54□□□□□ -2
VPS41-206ENST00000418457 CTNNA2P26232 953 aa2.54□□□□□ -2
VPS41-206ENST00000418457 PCK1P35558 622 aa2.54□□□□□ -2
VPS41-206ENST00000418457 VHLP40337 213 aa2.54□□□□□ -2
VPS41-206ENST00000418457 PEX19P40855 299 aa2.54□□□□□ -2
VPS41-206ENST00000418457 NOVP48745 357 aa2.54□□□□□ -2
VPS41-206ENST00000418457 DNA2P51530 1060 aa2.54□□□□□ -2
VPS41-206ENST00000418457 ZNF132P52740 706 aa2.54□□□□□ -2
VPS41-206ENST00000418457 CTSCP53634 463 aa2.54□□□□□ -2
VPS41-206ENST00000418457 PLTPP55058 493 aa2.54□□□□□ -2
VPS41-206ENST00000418457 CD81P60033 236 aa2.54□□□□□ -2
VPS41-206ENST00000418457 RPL26P61254 145 aaKnown RBP2.54□□□□□ -2
VPS41-206ENST00000418457 DYNLL1P63167 89 aaKnown RBP2.54□□□□□ -2
VPS41-206ENST00000418457 KCNJ2P63252 427 aa2.54□□□□□ -2
VPS41-206ENST00000418457 MRPS25P82663 173 aaKnown RBP2.54□□□□□ -2
VPS41-206ENST00000418457 MECOMQ03112 1051 aa2.54□□□□□ -2
VPS41-206ENST00000418457 SPOCK1Q08629 439 aa2.54□□□□□ -2
VPS41-206ENST00000418457 CETN1Q12798 172 aa2.54□□□□□ -2
VPS41-206ENST00000418457 PRPF4BQ13523 1007 aaKnown RBP2.54□□□□□ -2
VPS41-206ENST00000418457 CUL3Q13618 768 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms