RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 COPS4Q9BT78 406 aa11.49□□□□□ -0.57
LIMK1-202ENST00000418310 RERGLQ9H628 205 aa11.49□□□□□ -0.57
LIMK1-202ENST00000418310 TM9SF3Q9HD45 589 aa11.49□□□□□ -0.57
LIMK1-202ENST00000418310 ACOT13Q9NPJ3 140 aa11.49□□□□□ -0.57
LIMK1-202ENST00000418310 SPASTQ9UBP0 616 aa11.49□□□□□ -0.57
LIMK1-202ENST00000418310 CAB39Q9Y376 341 aaPredicted RBP11.49□□□□□ -0.57
LIMK1-202ENST00000418310 EFCAB9A8MZ26 197 aa11.48□□□□□ -0.57
LIMK1-202ENST00000418310 KPNA4O00629 521 aaPredicted RBP11.48□□□□□ -0.57
LIMK1-202ENST00000418310 TEX28O15482 410 aa11.48□□□□□ -0.57
LIMK1-202ENST00000418310 SERPINB7O75635 380 aa11.48□□□□□ -0.57
LIMK1-202ENST00000418310 DNTTP04053 509 aa11.48□□□□□ -0.57
LIMK1-202ENST00000418310 PRPS1L1P21108 318 aa11.48□□□□□ -0.57
LIMK1-202ENST00000418310 LIPAP38571 399 aa11.48□□□□□ -0.57
LIMK1-202ENST00000418310 CRISP3P54108 245 aa11.48□□□□□ -0.57
LIMK1-202ENST00000418310 RPS13P62277 151 aaKnown RBP11.48□□□□□ -0.57
LIMK1-202ENST00000418310 SPIBQ01892 262 aa11.48□□□□□ -0.57
LIMK1-202ENST00000418310 KIAA1614Q5VZ46 1190 aa11.48□□□□□ -0.57
LIMK1-202ENST00000418310 KDM4DQ6B0I6 523 aa11.48□□□□□ -0.57
LIMK1-202ENST00000418310 CACUL1Q86Y37 369 aa11.48□□□□□ -0.57
LIMK1-202ENST00000418310 MMP21Q8N119 569 aa11.48□□□□□ -0.57
LIMK1-202ENST00000418310 MCFD2Q8NI22 146 aa11.48□□□□□ -0.57
LIMK1-202ENST00000418310 CIDECQ96AQ7 238 aaPredicted RBP11.48□□□□□ -0.57
LIMK1-202ENST00000418310 WRAP53Q9BUR4 548 aaKnown RBP11.48□□□□□ -0.57
LIMK1-202ENST00000418310 OR51B5Q9H339 312 aa11.48□□□□□ -0.57
LIMK1-202ENST00000418310 MAGIXQ9H6Y5 334 aa11.48□□□□□ -0.57
LIMK1-202ENST00000418310 RDH14Q9HBH5 336 aa11.48□□□□□ -0.57
LIMK1-202ENST00000418310 GPR83Q9NYM4 423 aa11.48□□□□□ -0.57
LIMK1-202ENST00000418310 FRMPD3Q5JV73 1810 aa11.48□□□□□ -0.57
LIMK1-202ENST00000418310 CHD7Q9P2D1 2997 aa11.48□□□□□ -0.57
LIMK1-202ENST00000418310 SUV39H1O43463 412 aa11.48□□□□□ -0.57
LIMK1-202ENST00000418310 GABARAPO95166 117 aa11.48□□□□□ -0.57
LIMK1-202ENST00000418310 GTF2E2P29084 291 aaKnown RBP11.48□□□□□ -0.57
LIMK1-202ENST00000418310 SPINT3P49223 89 aa11.48□□□□□ -0.57
LIMK1-202ENST00000418310 LRRC74AQ0VAA2 488 aa11.48□□□□□ -0.57
LIMK1-202ENST00000418310 RFX4Q33E94 735 aa11.48□□□□□ -0.57
LIMK1-202ENST00000418310 CPTPQ5TA50 214 aa11.48□□□□□ -0.57
LIMK1-202ENST00000418310 ENTHD1Q8IYW4 607 aa11.48□□□□□ -0.57
LIMK1-202ENST00000418310 UBTD2Q8WUN7 234 aa11.48□□□□□ -0.57
LIMK1-202ENST00000418310 TCF25Q9BQ70 676 aa11.48□□□□□ -0.57
LIMK1-202ENST00000418310 SORBS1Q9BX66 1292 aaKnown RBP11.48□□□□□ -0.57
LIMK1-202ENST00000418310 IL21Q9HBE4 155 aa11.48□□□□□ -0.57
LIMK1-202ENST00000418310 DNMT3BQ9UBC3 853 aaKnown RBP11.48□□□□□ -0.57
LIMK1-202ENST00000418310 MAN2B2Q9Y2E5 1009 aa11.48□□□□□ -0.57
LIMK1-202ENST00000418310 SNX8Q9Y5X2 465 aa11.48□□□□□ -0.57
LIMK1-202ENST00000418310 LINC00854A0A1B0GVQ3 168 aa11.48□□□□□ -0.57
LIMK1-202ENST00000418310 CCL16O15467 120 aa11.48□□□□□ -0.57
LIMK1-202ENST00000418310 HOXA2O43364 376 aa11.48□□□□□ -0.57
LIMK1-202ENST00000418310 ABLIM3O94929 683 aa11.48□□□□□ -0.57
LIMK1-202ENST00000418310 XPAP23025 273 aaPredicted RBP11.48□□□□□ -0.57
LIMK1-202ENST00000418310 RYKP34925 604 aa11.48□□□□□ -0.57
LIMK1-202ENST00000418310 TMED10P49755 219 aaKnown RBP11.48□□□□□ -0.57
LIMK1-202ENST00000418310 RPS3AP61247 264 aaKnown RBP11.48□□□□□ -0.57
LIMK1-202ENST00000418310 NIPAL1Q6NVV3 410 aa11.48□□□□□ -0.57
LIMK1-202ENST00000418310 AGTRAPQ6RW13 159 aa11.48□□□□□ -0.57
LIMK1-202ENST00000418310 SZRD1Q7Z422 152 aa11.48□□□□□ -0.57
LIMK1-202ENST00000418310 HMGN2P46Q86SG4 172 aa11.48□□□□□ -0.57
LIMK1-202ENST00000418310 C11orf74Q86VG3 221 aa11.48□□□□□ -0.57
LIMK1-202ENST00000418310 PLPP6Q8IY26 295 aa11.48□□□□□ -0.57
LIMK1-202ENST00000418310 OVCA2Q8WZ82 227 aa11.48□□□□□ -0.57
LIMK1-202ENST00000418310 CHCHD6Q9BRQ6 235 aa11.48□□□□□ -0.57
LIMK1-202ENST00000418310 TMEM175Q9BSA9 504 aa11.48□□□□□ -0.57
LIMK1-202ENST00000418310 RPS6KA6Q9UK32 745 aa11.48□□□□□ -0.57
LIMK1-202ENST00000418310 CCDC88CQ9P219 2028 aa11.48□□□□□ -0.57
LIMK1-202ENST00000418310 TRIM64BA6NI03 449 aa11.47□□□□□ -0.57
LIMK1-202ENST00000418310 TNFRSF11BO00300 401 aa11.47□□□□□ -0.57
LIMK1-202ENST00000418310 SOCS5O75159 536 aa11.47□□□□□ -0.57
LIMK1-202ENST00000418310 WBP4O75554 376 aaKnown RBP11.47□□□□□ -0.57
LIMK1-202ENST00000418310 SOD2P04179 222 aa11.47□□□□□ -0.57
LIMK1-202ENST00000418310 STSP08842 583 aa11.47□□□□□ -0.57
LIMK1-202ENST00000418310 GADD45AP24522 165 aa11.47□□□□□ -0.57
LIMK1-202ENST00000418310 RPS26P62854 115 aaKnown RBP11.47□□□□□ -0.57
LIMK1-202ENST00000418310 INAVAQ3KP66 663 aa11.47□□□□□ -0.57
LIMK1-202ENST00000418310 ZNF385BQ569K4 471 aa11.47□□□□□ -0.57
LIMK1-202ENST00000418310 LYPLAL1Q5VWZ2 237 aa11.47□□□□□ -0.57
LIMK1-202ENST00000418310 CADM3Q8N126 398 aa11.47□□□□□ -0.57
LIMK1-202ENST00000418310 SLC5A8Q8N695 610 aa11.47□□□□□ -0.57
LIMK1-202ENST00000418310 DCSTAMPQ9H295 470 aa11.47□□□□□ -0.57
LIMK1-202ENST00000418310 LINC00597Q9H2U6 94 aa11.47□□□□□ -0.57
LIMK1-202ENST00000418310 FAM83DQ9H4H8 585 aa11.47□□□□□ -0.57
LIMK1-202ENST00000418310 ZDHHC4Q9NPG8 344 aa11.47□□□□□ -0.57
LIMK1-202ENST00000418310 OGDHLQ9ULD0 1010 aa11.47□□□□□ -0.57
LIMK1-202ENST00000418310 RNF6Q9Y252 685 aa11.47□□□□□ -0.57
LIMK1-202ENST00000418310 PRKAB1Q9Y478 270 aa11.47□□□□□ -0.57
LIMK1-202ENST00000418310 TRIM43BA6NCK2 446 aa11.47□□□□□ -0.57
LIMK1-202ENST00000418310 JRKO75564 520 aa11.47□□□□□ -0.57
LIMK1-202ENST00000418310 MYO1DO94832 1006 aa11.47□□□□□ -0.57
LIMK1-202ENST00000418310 C6orf47O95873 294 aa11.47□□□□□ -0.57
LIMK1-202ENST00000418310 CHRM5P08912 532 aaPredicted RBP11.47□□□□□ -0.57
LIMK1-202ENST00000418310 JUPP14923 745 aa11.47□□□□□ -0.57
LIMK1-202ENST00000418310 RECQLP46063 649 aaPredicted RBP11.47□□□□□ -0.57
LIMK1-202ENST00000418310 SLC6A12P48065 614 aa11.47□□□□□ -0.57
LIMK1-202ENST00000418310 NKX2-5P52952 324 aaPredicted RBP11.47□□□□□ -0.57
LIMK1-202ENST00000418310 CRYBA2P53672 197 aa11.47□□□□□ -0.57
LIMK1-202ENST00000418310 DMC1Q14565 340 aa11.47□□□□□ -0.57
LIMK1-202ENST00000418310 ARSIQ5FYB1 569 aa11.47□□□□□ -0.57
LIMK1-202ENST00000418310 RBM12BQ8IXT5 1001 aaKnown RBP11.47□□□□□ -0.57
LIMK1-202ENST00000418310 HUS1BQ8NHY5 278 aa11.47□□□□□ -0.57
LIMK1-202ENST00000418310 NFKBIDQ8NI38 313 aa11.47□□□□□ -0.57
LIMK1-202ENST00000418310 CSGALNACT1Q8TDX6 532 aa11.47□□□□□ -0.57
LIMK1-202ENST00000418310 TMEM159Q96B96 161 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms