RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.74□□□□□ -1.65
VPS41-205ENST00000414632 RNASEH2BQ5TBB1 312 aaKnown RBP4.74□□□□□ -1.65
VPS41-205ENST00000414632 AFTPHQ6ULP2 937 aa4.74□□□□□ -1.65
VPS41-205ENST00000414632 C4orf22Q6V702 233 aa4.74□□□□□ -1.65
VPS41-205ENST00000414632 SLC9B2Q86UD5 537 aa4.74□□□□□ -1.65
VPS41-205ENST00000414632 C17orf82Q86X59 251 aaPredicted RBP4.74□□□□□ -1.65
VPS41-205ENST00000414632 KRT222Q8N1A0 295 aa4.74□□□□□ -1.65
VPS41-205ENST00000414632 NAT8LQ8N9F0 302 aa4.74□□□□□ -1.65
VPS41-205ENST00000414632 NUDT10Q8NFP7 164 aa4.74□□□□□ -1.65
VPS41-205ENST00000414632 OR10H5Q8NGA6 315 aa4.74□□□□□ -1.65
VPS41-205ENST00000414632 OR6C4Q8NGE1 309 aa4.74□□□□□ -1.65
VPS41-205ENST00000414632 OR2L2Q8NH16 312 aa4.74□□□□□ -1.65
VPS41-205ENST00000414632 OR4L1Q8NH43 312 aa4.74□□□□□ -1.65
VPS41-205ENST00000414632 DTX3LQ8TDB6 740 aa4.74□□□□□ -1.65
VPS41-205ENST00000414632 NCSTNQ92542 709 aa4.74□□□□□ -1.65
VPS41-205ENST00000414632 ELMO1Q92556 727 aa4.74□□□□□ -1.65
VPS41-205ENST00000414632 RSC1A1Q92681 617 aa4.74□□□□□ -1.65
VPS41-205ENST00000414632 TRIM63Q969Q1 353 aa4.74□□□□□ -1.65
VPS41-205ENST00000414632 ZNF566Q969W8 418 aa4.74□□□□□ -1.65
VPS41-205ENST00000414632 NMD3Q96D46 503 aaKnown RBP4.74□□□□□ -1.65
VPS41-205ENST00000414632 CXorf40BQ96DE9 158 aa4.74□□□□□ -1.65
VPS41-205ENST00000414632 NXPE2Q96DL1 559 aa4.74□□□□□ -1.65
VPS41-205ENST00000414632 NUDT11Q96G61 164 aa4.74□□□□□ -1.65
VPS41-205ENST00000414632 NAF1Q96HR8 494 aaKnown RBP4.74□□□□□ -1.65
VPS41-205ENST00000414632 C12orf66Q96MD2 445 aa4.74□□□□□ -1.65
VPS41-205ENST00000414632 SGPP1Q9BX95 441 aa4.74□□□□□ -1.65
VPS41-205ENST00000414632 IL22Q9GZX6 179 aa4.74□□□□□ -1.65
VPS41-205ENST00000414632 DPH5Q9H2P9 285 aa4.74□□□□□ -1.65
VPS41-205ENST00000414632 STN1Q9H668 368 aaKnown RBP4.74□□□□□ -1.65
VPS41-205ENST00000414632 COG4Q9H9E3 785 aa4.74□□□□□ -1.65
VPS41-205ENST00000414632 TREX1Q9NSU2 369 aa4.74□□□□□ -1.65
VPS41-205ENST00000414632 SIDT1Q9NXL6 827 aaKnown RBP4.74□□□□□ -1.65
VPS41-205ENST00000414632 BFARQ9NZS9 450 aa4.74□□□□□ -1.65
VPS41-205ENST00000414632 OGFRQ9NZT2 677 aa4.74□□□□□ -1.65
VPS41-205ENST00000414632 SLC17A6Q9P2U8 582 aa4.74□□□□□ -1.65
VPS41-205ENST00000414632 PISDQ9UG56 409 aa4.74□□□□□ -1.65
VPS41-205ENST00000414632 CIDEBQ9UHD4 219 aa4.74□□□□□ -1.65
VPS41-205ENST00000414632 ANAPC5Q9UJX4 755 aa4.74□□□□□ -1.65
VPS41-205ENST00000414632 SNX24Q9Y343 169 aa4.74□□□□□ -1.65
VPS41-205ENST00000414632 LOXL2Q9Y4K0 774 aa4.74□□□□□ -1.65
VPS41-205ENST00000414632 MAD1L1Q9Y6D9 718 aa4.74□□□□□ -1.65
VPS41-205ENST00000414632 IGLV3-16A0A075B6K0 115 aa4.73□□□□□ -1.65
VPS41-205ENST00000414632 CCDC187A0A096LP49 1063 aa4.73□□□□□ -1.65
VPS41-205ENST00000414632 KIR2DS5A0A0G2JLQ3 304 aa4.73□□□□□ -1.65
VPS41-205ENST00000414632 A0A0G2JNG1 304 aa4.73□□□□□ -1.65
VPS41-205ENST00000414632 IGHV5-10-1A0A0J9YXX1 117 aa4.73□□□□□ -1.65
VPS41-205ENST00000414632 TEX51A0A1B0GUA7 166 aa4.73□□□□□ -1.65
VPS41-205ENST00000414632 KRT87PA6NCN2 255 aa4.73□□□□□ -1.65
VPS41-205ENST00000414632 MGAT4DA6NG13 374 aa4.73□□□□□ -1.65
VPS41-205ENST00000414632 SRRM3A6NNA2 597 aaPredicted RBP4.73□□□□□ -1.65
VPS41-205ENST00000414632 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.73□□□□□ -1.65
VPS41-205ENST00000414632 KIR2DS3K7RE56 304 aa4.73□□□□□ -1.65
VPS41-205ENST00000414632 BTN3A1O00481 513 aa4.73□□□□□ -1.65
VPS41-205ENST00000414632 RAD51CO43502 376 aa4.73□□□□□ -1.65
VPS41-205ENST00000414632 DUX1O43812 170 aa4.73□□□□□ -1.65
VPS41-205ENST00000414632 KIF1CO43896 1103 aaKnown RBP4.73□□□□□ -1.65
VPS41-205ENST00000414632 NDUFS3O75489 264 aa4.73□□□□□ -1.65
VPS41-205ENST00000414632 TOX4O94842 621 aa4.73□□□□□ -1.65
VPS41-205ENST00000414632 TNFSF15O95150 251 aa4.73□□□□□ -1.65
VPS41-205ENST00000414632 CPNE6O95741 557 aa4.73□□□□□ -1.65
VPS41-205ENST00000414632 CSTBP04080 98 aaKnown RBP4.73□□□□□ -1.65
VPS41-205ENST00000414632 SLC35G4P0C7Q5 338 aa4.73□□□□□ -1.65
VPS41-205ENST00000414632 OR56A5P0C7T3 313 aa4.73□□□□□ -1.65
VPS41-205ENST00000414632 MTHFD1P11586 935 aaKnown RBP4.73□□□□□ -1.65
VPS41-205ENST00000414632 CCL4P13236 92 aa4.73□□□□□ -1.65
VPS41-205ENST00000414632 HSD3B1P14060 373 aa4.73□□□□□ -1.65
VPS41-205ENST00000414632 SLC2A4P14672 509 aa4.73□□□□□ -1.65
VPS41-205ENST00000414632 GYPEP15421 78 aa4.73□□□□□ -1.65
VPS41-205ENST00000414632 AMD1P17707 334 aa4.73□□□□□ -1.65
VPS41-205ENST00000414632 XRCC1P18887 633 aaPredicted RBP4.73□□□□□ -1.65
VPS41-205ENST00000414632 FMO4P31512 558 aa4.73□□□□□ -1.65
VPS41-205ENST00000414632 NSG1P42857 185 aa4.73□□□□□ -1.65
VPS41-205ENST00000414632 MAGEA6P43360 314 aa4.73□□□□□ -1.65
VPS41-205ENST00000414632 ABCG1P45844 678 aa4.73□□□□□ -1.65
VPS41-205ENST00000414632 RPL21P46778 160 aaKnown RBP4.73□□□□□ -1.65
VPS41-205ENST00000414632 LEPRP48357 1165 aaKnown RBP4.73□□□□□ -1.65
VPS41-205ENST00000414632 ITGA8P53708 1063 aa4.73□□□□□ -1.65
VPS41-205ENST00000414632 GP2P55259 537 aaKnown RBP4.73□□□□□ -1.65
VPS41-205ENST00000414632 RPS16P62249 146 aaKnown RBP4.73□□□□□ -1.65
VPS41-205ENST00000414632 SARNPP82979 210 aaKnown RBP4.73□□□□□ -1.65
VPS41-205ENST00000414632 MPP1Q00013 466 aa4.73□□□□□ -1.65
VPS41-205ENST00000414632 DMPKQ09013 629 aa4.73□□□□□ -1.65
VPS41-205ENST00000414632 PRKG2Q13237 762 aa4.73□□□□□ -1.65
VPS41-205ENST00000414632 CTBP1Q13363 440 aa4.73□□□□□ -1.65
VPS41-205ENST00000414632 LAMB3Q13751 1172 aa4.73□□□□□ -1.65
VPS41-205ENST00000414632 BLMHQ13867 455 aa4.73□□□□□ -1.65
VPS41-205ENST00000414632 DHX34Q14147 1143 aaKnown RBP4.73□□□□□ -1.65
VPS41-205ENST00000414632 KRT33BQ14525 404 aa4.73□□□□□ -1.65
VPS41-205ENST00000414632 KIR2DS5Q14953 304 aa4.73□□□□□ -1.65
VPS41-205ENST00000414632 NR1D2Q14995 579 aa4.73□□□□□ -1.65
VPS41-205ENST00000414632 SYTL3Q4VX76 610 aa4.73□□□□□ -1.65
VPS41-205ENST00000414632 ZNF789Q5FWF6 425 aa4.73□□□□□ -1.65
VPS41-205ENST00000414632 PRR31Q5SQ13 230 aa4.73□□□□□ -1.65
VPS41-205ENST00000414632 AGAP9Q5VTM2 703 aa4.73□□□□□ -1.65
VPS41-205ENST00000414632 METRNLQ641Q3 311 aa4.73□□□□□ -1.65
VPS41-205ENST00000414632 IRGCQ6NXR0 463 aa4.73□□□□□ -1.65
VPS41-205ENST00000414632 FBXO38Q6PIJ6 1188 aa4.73□□□□□ -1.65
VPS41-205ENST00000414632 C19orf48Q6RUI8 117 aa4.73□□□□□ -1.65
VPS41-205ENST00000414632 ABRAXAS1Q6UWZ7 409 aa4.73□□□□□ -1.65
VPS41-205ENST00000414632 FAM92BQ6ZTR7 304 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms