RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 PCDHAC1Q9H158 963 aa9.6□□□□□ -0.87
DDB1-202ENST00000414411 TRIT1Q9H3H1 467 aaKnown RBP9.6□□□□□ -0.87
DDB1-202ENST00000414411 TMCO1Q9UM00 188 aa9.6□□□□□ -0.87
DDB1-202ENST00000414411 BTRCQ9Y297 605 aa9.6□□□□□ -0.87
DDB1-202ENST00000414411 OARD1Q9Y530 152 aa9.6□□□□□ -0.87
DDB1-202ENST00000414411 COLEC10Q9Y6Z7 277 aa9.6□□□□□ -0.87
DDB1-202ENST00000414411 UNC13CQ8NB66 2214 aa9.59□□□□□ -0.87
DDB1-202ENST00000414411 LY6G6EA0A0G2JKS1 128 aa9.59□□□□□ -0.87
DDB1-202ENST00000414411 KRT87PA6NCN2 255 aa9.59□□□□□ -0.87
DDB1-202ENST00000414411 NCF1BA6NI72 391 aaPredicted RBP9.59□□□□□ -0.87
DDB1-202ENST00000414411 NCF1CA8MVU1 366 aaPredicted RBP9.59□□□□□ -0.87
DDB1-202ENST00000414411 PPM1DO15297 605 aa9.59□□□□□ -0.87
DDB1-202ENST00000414411 SIGLEC6O43699 453 aa9.59□□□□□ -0.87
DDB1-202ENST00000414411 FOXD2O60548 495 aaPredicted RBP9.59□□□□□ -0.87
DDB1-202ENST00000414411 CRCPO75575 148 aa9.59□□□□□ -0.87
DDB1-202ENST00000414411 ESRRBO95718 433 aa9.59□□□□□ -0.87
DDB1-202ENST00000414411 MLYCDO95822 493 aa9.59□□□□□ -0.87
DDB1-202ENST00000414411 RPN2P04844 631 aa9.59□□□□□ -0.87
DDB1-202ENST00000414411 LINC00032P0C843 101 aa9.59□□□□□ -0.87
DDB1-202ENST00000414411 PRR35P0CG20 571 aa9.59□□□□□ -0.87
DDB1-202ENST00000414411 CD59P13987 128 aa9.59□□□□□ -0.87
DDB1-202ENST00000414411 HGFP14210 728 aa9.59□□□□□ -0.87
DDB1-202ENST00000414411 NCF1P14598 390 aaPredicted RBP9.59□□□□□ -0.87
DDB1-202ENST00000414411 IDO1P14902 403 aa9.59□□□□□ -0.87
DDB1-202ENST00000414411 CAPN3P20807 821 aa9.59□□□□□ -0.87
DDB1-202ENST00000414411 BDKRB1P46663 353 aa9.59□□□□□ -0.87
DDB1-202ENST00000414411 SLC7A2P52569 658 aa9.59□□□□□ -0.87
DDB1-202ENST00000414411 AP1S2P56377 157 aa9.59□□□□□ -0.87
DDB1-202ENST00000414411 IRX1P78414 480 aaPredicted RBP9.59□□□□□ -0.87
DDB1-202ENST00000414411 CDKL1Q00532 357 aa9.59□□□□□ -0.87
DDB1-202ENST00000414411 RHDQ02161 417 aa9.59□□□□□ -0.87
DDB1-202ENST00000414411 FOLH1Q04609 750 aa9.59□□□□□ -0.87
DDB1-202ENST00000414411 PRKG2Q13237 762 aa9.59□□□□□ -0.87
DDB1-202ENST00000414411 SUZ12Q15022 739 aaKnown RBP9.59□□□□□ -0.87
DDB1-202ENST00000414411 C14orf28Q4W4Y0 310 aa9.59□□□□□ -0.87
DDB1-202ENST00000414411 XKR7Q5GH72 579 aa9.59□□□□□ -0.87
DDB1-202ENST00000414411 CDKL4Q5MAI5 379 aa9.59□□□□□ -0.87
DDB1-202ENST00000414411 RNF220Q5VTB9 566 aa9.59□□□□□ -0.87
DDB1-202ENST00000414411 EFL1Q7Z2Z2 1120 aaKnown RBP9.59□□□□□ -0.87
DDB1-202ENST00000414411 SYVN1Q86TM6 617 aa9.59□□□□□ -0.87
DDB1-202ENST00000414411 SLC9B2Q86UD5 537 aa9.59□□□□□ -0.87
DDB1-202ENST00000414411 GPSM1Q86YR5 675 aa9.59□□□□□ -0.87
DDB1-202ENST00000414411 ARL10Q8N8L6 244 aa9.59□□□□□ -0.87
DDB1-202ENST00000414411 TMEM102Q8N9M5 508 aaPredicted RBP9.59□□□□□ -0.87
DDB1-202ENST00000414411 ATP6V1E2Q96A05 226 aa9.59□□□□□ -0.87
DDB1-202ENST00000414411 CXorf40BQ96DE9 158 aa9.59□□□□□ -0.87
DDB1-202ENST00000414411 KCNK17Q96T54 332 aa9.59□□□□□ -0.87
DDB1-202ENST00000414411 PKP4Q99569 1192 aa9.59□□□□□ -0.87
DDB1-202ENST00000414411 GPATCH1Q9BRR8 931 aaKnown RBP9.59□□□□□ -0.87
DDB1-202ENST00000414411 SLC39A3Q9BRY0 314 aa9.59□□□□□ -0.87
DDB1-202ENST00000414411 EDEM2Q9BV94 578 aa9.59□□□□□ -0.87
DDB1-202ENST00000414411 YIPF3Q9GZM5 350 aa9.59□□□□□ -0.87
DDB1-202ENST00000414411 TWSG1Q9GZX9 223 aa9.59□□□□□ -0.87
DDB1-202ENST00000414411 KIR3DX1Q9H7L2 352 aa9.59□□□□□ -0.87
DDB1-202ENST00000414411 POT1Q9NUX5 634 aa9.59□□□□□ -0.87
DDB1-202ENST00000414411 RAPGEFL1Q9UHV5 662 aa9.59□□□□□ -0.87
DDB1-202ENST00000414411 ZNF225Q9UK10 706 aa9.59□□□□□ -0.87
DDB1-202ENST00000414411 NDUFAF1Q9Y375 327 aa9.59□□□□□ -0.87
DDB1-202ENST00000414411 U3KQA8 63 aa9.59□□□□□ -0.87
DDB1-202ENST00000414411 CEP250Q9BV73 2442 aa9.59□□□□□ -0.87
DDB1-202ENST00000414411 TCRBV3S1A0A5B6 114 aa9.58□□□□□ -0.88
DDB1-202ENST00000414411 E2F3O00716 465 aa9.58□□□□□ -0.88
DDB1-202ENST00000414411 TXNDC9O14530 226 aa9.58□□□□□ -0.88
DDB1-202ENST00000414411 DENRO43583 198 aaKnown RBP9.58□□□□□ -0.88
DDB1-202ENST00000414411 VIPP01282 170 aa9.58□□□□□ -0.88
DDB1-202ENST00000414411 HIST1H2AGP0C0S8 130 aaPredicted RBP9.58□□□□□ -0.88
DDB1-202ENST00000414411 ALPPL2P10696 532 aa9.58□□□□□ -0.88
DDB1-202ENST00000414411 UROSP10746 265 aa9.58□□□□□ -0.88
DDB1-202ENST00000414411 HIST1H2ADP20671 130 aa9.58□□□□□ -0.88
DDB1-202ENST00000414411 CYP2A7P20853 494 aa9.58□□□□□ -0.88
DDB1-202ENST00000414411 PRDX3P30048 256 aaKnown RBP9.58□□□□□ -0.88
DDB1-202ENST00000414411 MRPL19P49406 292 aaKnown RBP9.58□□□□□ -0.88
DDB1-202ENST00000414411 MAZP56270 477 aaKnown RBP9.58□□□□□ -0.88
DDB1-202ENST00000414411 NME5P56597 212 aa9.58□□□□□ -0.88
DDB1-202ENST00000414411 HHEXQ03014 270 aa9.58□□□□□ -0.88
DDB1-202ENST00000414411 PDK3Q15120 406 aa9.58□□□□□ -0.88
DDB1-202ENST00000414411 TLR1Q15399 786 aa9.58□□□□□ -0.88
DDB1-202ENST00000414411 IL23RQ5VWK5 629 aa9.58□□□□□ -0.88
DDB1-202ENST00000414411 FOXB2Q5VYV0 432 aa9.58□□□□□ -0.88
DDB1-202ENST00000414411 TMEM26Q6ZUK4 368 aa9.58□□□□□ -0.88
DDB1-202ENST00000414411 RBM12BQ8IXT5 1001 aaKnown RBP9.58□□□□□ -0.88
DDB1-202ENST00000414411 MARVELD2Q8N4S9 558 aa9.58□□□□□ -0.88
DDB1-202ENST00000414411 EID2Q8N6I1 236 aa9.58□□□□□ -0.88
DDB1-202ENST00000414411 AVL9Q8NBF6 648 aa9.58□□□□□ -0.88
DDB1-202ENST00000414411 OR9A1PQ8NGU1 263 aa9.58□□□□□ -0.88
DDB1-202ENST00000414411 DUS3LQ96G46 650 aaKnown RBP9.58□□□□□ -0.88
DDB1-202ENST00000414411 HIST1H2AHQ96KK5 128 aa9.58□□□□□ -0.88
DDB1-202ENST00000414411 APOLD1Q96LR9 279 aa9.58□□□□□ -0.88
DDB1-202ENST00000414411 CCDC138Q96M89 665 aa9.58□□□□□ -0.88
DDB1-202ENST00000414411 TRAPPC9Q96Q05 1148 aa9.58□□□□□ -0.88
DDB1-202ENST00000414411 NRTNQ99748 197 aa9.58□□□□□ -0.88
DDB1-202ENST00000414411 HIST1H2AJQ99878 128 aa9.58□□□□□ -0.88
DDB1-202ENST00000414411 H2AFJQ9BTM1 129 aa9.58□□□□□ -0.88
DDB1-202ENST00000414411 TRIM54Q9BYV2 358 aa9.58□□□□□ -0.88
DDB1-202ENST00000414411 UCK1Q9HA47 277 aa9.58□□□□□ -0.88
DDB1-202ENST00000414411 TMEM9BQ9NQ34 198 aa9.58□□□□□ -0.88
DDB1-202ENST00000414411 MAP10Q9P2G4 905 aa9.58□□□□□ -0.88
DDB1-202ENST00000414411 ABCD2Q9UBJ2 740 aa9.58□□□□□ -0.88
DDB1-202ENST00000414411 BTBD3Q9Y2F9 522 aa9.58□□□□□ -0.88
DDB1-202ENST00000414411 TIMM22Q9Y584 194 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms