RNA–Protein interactions for RNA: ENST00000414306.5

SBDS-202, Transcript of SBDS, ribosome maturation factor, humanhuman

TSL 5

Gene SBDS, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDS-202ENST00000414306 L3HYPDHQ96EM0 354 aa16.93■□□□□ 0.3
SBDS-202ENST00000414306 PTCD3Q96EY7 689 aaKnown RBP16.93■□□□□ 0.3
SBDS-202ENST00000414306 SLC7A5P2Q9GIP4 190 aa16.93■□□□□ 0.3
SBDS-202ENST00000414306 THSD1Q9NS62 852 aa16.93■□□□□ 0.3
SBDS-202ENST00000414306 PCDHGA4Q9Y5G9 962 aa16.93■□□□□ 0.3
SBDS-202ENST00000414306 C1QTNF9BB2RNN3 333 aa16.92■□□□□ 0.3
SBDS-202ENST00000414306 ZNF749O43361 778 aa16.92■□□□□ 0.3
SBDS-202ENST00000414306 STK17BO94768 372 aa16.92■□□□□ 0.3
SBDS-202ENST00000414306 MSL3P1P0C860 447 aa16.92■□□□□ 0.3
SBDS-202ENST00000414306 C1QTNF9P0C862 333 aa16.92■□□□□ 0.3
SBDS-202ENST00000414306 ETV4P43268 484 aa16.92■□□□□ 0.3
SBDS-202ENST00000414306 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.92■□□□□ 0.3
SBDS-202ENST00000414306 CFAP157Q5JU67 520 aa16.92■□□□□ 0.3
SBDS-202ENST00000414306 ZCCHC23Q6ZST2 131 aa16.92■□□□□ 0.3
SBDS-202ENST00000414306 VN1R4Q7Z5H5 301 aa16.92■□□□□ 0.3
SBDS-202ENST00000414306 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.92■□□□□ 0.3
SBDS-202ENST00000414306 LSMEM2Q8N112 164 aa16.92■□□□□ 0.3
SBDS-202ENST00000414306 DTWD1Q8N5C7 304 aa16.92■□□□□ 0.3
SBDS-202ENST00000414306 ANKRD53Q8N9V6 530 aa16.92■□□□□ 0.3
SBDS-202ENST00000414306 MFSD9Q8NBP5 474 aa16.92■□□□□ 0.3
SBDS-202ENST00000414306 CCT6BQ92526 530 aa16.92■□□□□ 0.3
SBDS-202ENST00000414306 GATA6Q92908 595 aa16.92■□□□□ 0.3
SBDS-202ENST00000414306 CLIP3Q96DZ5 547 aa16.92■□□□□ 0.3
SBDS-202ENST00000414306 C1QTNF3Q9BXJ4 246 aa16.92■□□□□ 0.3
SBDS-202ENST00000414306 SHCBP1LQ9BZQ2 653 aa16.92■□□□□ 0.3
SBDS-202ENST00000414306 ACBD3Q9H3P7 528 aa16.92■□□□□ 0.3
SBDS-202ENST00000414306 GSTO2Q9H4Y5 243 aa16.92■□□□□ 0.3
SBDS-202ENST00000414306 RNF11Q9Y3C5 154 aa16.92■□□□□ 0.3
SBDS-202ENST00000414306 PCDHGA3Q9Y5H0 932 aa16.92■□□□□ 0.3
SBDS-202ENST00000414306 CELSR3Q9NYQ7 3312 aa16.92■□□□□ 0.3
SBDS-202ENST00000414306 SCN3AQ9NY46 2000 aa16.92■□□□□ 0.3
SBDS-202ENST00000414306 FER1L5A0AVI2 2057 aa16.92■□□□□ 0.3
SBDS-202ENST00000414306 H3BMH7 237 aa16.91■□□□□ 0.3
SBDS-202ENST00000414306 TM9SF1O15321 606 aa16.91■□□□□ 0.3
SBDS-202ENST00000414306 NVLO15381 856 aaKnown RBP16.91■□□□□ 0.3
SBDS-202ENST00000414306 NDUFS4O43181 175 aa16.91■□□□□ 0.3
SBDS-202ENST00000414306 WFS1O76024 890 aa16.91■□□□□ 0.3
SBDS-202ENST00000414306 DXOO77932 396 aaKnown RBP16.91■□□□□ 0.3
SBDS-202ENST00000414306 ZWINTO95229 277 aa16.91■□□□□ 0.3
SBDS-202ENST00000414306 PCNAP12004 261 aa16.91■□□□□ 0.3
SBDS-202ENST00000414306 SCTRP47872 440 aa16.91■□□□□ 0.3
SBDS-202ENST00000414306 SERPINB4P48594 390 aa16.91■□□□□ 0.3
SBDS-202ENST00000414306 DDX39BQ13838 428 aaKnown RBP16.91■□□□□ 0.3
SBDS-202ENST00000414306 CPSF6Q16630 551 aaKnown RBP eCLIP16.91■□□□□ 0.3
SBDS-202ENST00000414306 C1orf189Q5VU69 101 aa16.91■□□□□ 0.3
SBDS-202ENST00000414306 METTL2BQ6P1Q9 378 aaKnown RBP16.91■□□□□ 0.3
SBDS-202ENST00000414306 TMIGD1Q6UXZ0 262 aa16.91■□□□□ 0.3
SBDS-202ENST00000414306 ASPGQ86U10 573 aa16.91■□□□□ 0.3
SBDS-202ENST00000414306 KRT78Q8N1N4 520 aa16.91■□□□□ 0.3
SBDS-202ENST00000414306 TBC1D19Q8N5T2 526 aa16.91■□□□□ 0.3
SBDS-202ENST00000414306 METTL27Q8N6F8 245 aaPredicted RBP16.91■□□□□ 0.3
SBDS-202ENST00000414306 SLC38A9Q8NBW4 561 aa16.91■□□□□ 0.3
SBDS-202ENST00000414306 GALNT6Q8NCL4 622 aa16.91■□□□□ 0.3
SBDS-202ENST00000414306 OR8K5Q8NH50 307 aa16.91■□□□□ 0.3
SBDS-202ENST00000414306 NAF1Q96HR8 494 aaKnown RBP16.91■□□□□ 0.3
SBDS-202ENST00000414306 TEFMQ96QE5 360 aaKnown RBP16.91■□□□□ 0.3
SBDS-202ENST00000414306 EFCAB11Q9BUY7 163 aa16.91■□□□□ 0.3
SBDS-202ENST00000414306 EHD1Q9H4M9 534 aa16.91■□□□□ 0.3
SBDS-202ENST00000414306 ACTR5Q9H9F9 607 aaPredicted RBP16.91■□□□□ 0.3
SBDS-202ENST00000414306 DHCR7Q9UBM7 475 aaKnown RBP16.91■□□□□ 0.3
SBDS-202ENST00000414306 RUVBL1Q9Y265 456 aaKnown RBP16.91■□□□□ 0.3
SBDS-202ENST00000414306 FFAR3O14843 346 aa16.91■□□□□ 0.3
SBDS-202ENST00000414306 GPR42O15529 346 aa16.91■□□□□ 0.3
SBDS-202ENST00000414306 SRPX2O60687 465 aaPredicted RBP16.91■□□□□ 0.3
SBDS-202ENST00000414306 TRIM13O60858 407 aa16.91■□□□□ 0.3
SBDS-202ENST00000414306 MED26O95402 600 aa16.91■□□□□ 0.3
SBDS-202ENST00000414306 BPGMP07738 259 aa16.91■□□□□ 0.3
SBDS-202ENST00000414306 CXCR2P25025 360 aa16.91■□□□□ 0.3
SBDS-202ENST00000414306 HNF4AP41235 474 aa16.91■□□□□ 0.3
SBDS-202ENST00000414306 DNAJB13P59910 316 aa16.91■□□□□ 0.3
SBDS-202ENST00000414306 SNRPNP63162 240 aaKnown RBP16.91■□□□□ 0.3
SBDS-202ENST00000414306 TRAF3Q13114 568 aa16.91■□□□□ 0.3
SBDS-202ENST00000414306 TBC1D25Q3MII6 688 aa16.91■□□□□ 0.3
SBDS-202ENST00000414306 PAGE2BQ5JRK9 111 aa16.91■□□□□ 0.3
SBDS-202ENST00000414306 TCTE1Q5JU00 501 aa16.91■□□□□ 0.3
SBDS-202ENST00000414306 GRHL2Q6ISB3 625 aa16.91■□□□□ 0.3
SBDS-202ENST00000414306 RNF175Q8N4F7 328 aa16.91■□□□□ 0.3
SBDS-202ENST00000414306 TTC29Q8NA56 475 aaPredicted RBP16.91■□□□□ 0.3
SBDS-202ENST00000414306 OR4F6Q8NGB9 312 aa16.91■□□□□ 0.3
SBDS-202ENST00000414306 ZCCHC10Q8TBK6 192 aa16.91■□□□□ 0.3
SBDS-202ENST00000414306 SLC13A3Q8WWT9 602 aa16.91■□□□□ 0.3
SBDS-202ENST00000414306 WDR34Q96EX3 536 aa16.91■□□□□ 0.3
SBDS-202ENST00000414306 ZPBPQ9BS86 351 aa16.91■□□□□ 0.3
SBDS-202ENST00000414306 NDC1Q9BTX1 674 aa16.91■□□□□ 0.3
SBDS-202ENST00000414306 GATA5Q9BWX5 397 aaPredicted RBP16.91■□□□□ 0.3
SBDS-202ENST00000414306 CCDC86Q9H6F5 360 aaKnown RBP16.91■□□□□ 0.3
SBDS-202ENST00000414306 NDOR1Q9UHB4 597 aa16.91■□□□□ 0.3
SBDS-202ENST00000414306 ZNF490Q9ULM2 529 aaPredicted RBP16.91■□□□□ 0.3
SBDS-202ENST00000414306 PCDHGA7Q9Y5G6 932 aa16.91■□□□□ 0.3
SBDS-202ENST00000414306 HYKKA2RU49 373 aa16.9■□□□□ 0.3
SBDS-202ENST00000414306 SH3BGRLO75368 114 aa16.9■□□□□ 0.3
SBDS-202ENST00000414306 CLDN9O95484 217 aa16.9■□□□□ 0.3
SBDS-202ENST00000414306 ALAS2P22557 587 aa16.9■□□□□ 0.3
SBDS-202ENST00000414306 ERVPABLB-1P60509 514 aa16.9■□□□□ 0.3
SBDS-202ENST00000414306 RELAQ04206 551 aa16.9■□□□□ 0.3
SBDS-202ENST00000414306 GRM7Q14831 915 aa16.9■□□□□ 0.3
SBDS-202ENST00000414306 TBCCQ15814 346 aa16.9■□□□□ 0.3
SBDS-202ENST00000414306 HIST2H2ACQ16777 129 aaPredicted RBP16.9■□□□□ 0.3
SBDS-202ENST00000414306 HHATQ5VTY9 493 aa16.9■□□□□ 0.3
SBDS-202ENST00000414306 HIST2H2AA3Q6FI13 130 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms