RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 NCCRP1Q6ZVX7 275 aaPredicted RBP11.47□□□□□ -0.57
LIMS2-210ENST00000413578 CRLF3Q8IUI8 442 aa11.47□□□□□ -0.57
LIMS2-210ENST00000413578 REXO1L1PQ8IX06 675 aa11.47□□□□□ -0.57
LIMS2-210ENST00000413578 GIMAP7Q8NHV1 300 aa11.47□□□□□ -0.57
LIMS2-210ENST00000413578 M1APQ8TC57 530 aa11.47□□□□□ -0.57
LIMS2-210ENST00000413578 C1orf54Q8WWF1 131 aa11.47□□□□□ -0.57
LIMS2-210ENST00000413578 METTL21AQ8WXB1 218 aa11.47□□□□□ -0.57
LIMS2-210ENST00000413578 FAM136AQ96C01 138 aa11.47□□□□□ -0.57
LIMS2-210ENST00000413578 TCF12Q99081 682 aa11.47□□□□□ -0.57
LIMS2-210ENST00000413578 SLC30A3Q99726 388 aa11.47□□□□□ -0.57
LIMS2-210ENST00000413578 TRIM5Q9C035 493 aa11.47□□□□□ -0.57
LIMS2-210ENST00000413578 MMP25Q9NPA2 562 aa11.47□□□□□ -0.57
LIMS2-210ENST00000413578 FAM114A2Q9NRY5 505 aa11.47□□□□□ -0.57
LIMS2-210ENST00000413578 UTP6Q9NYH9 597 aaKnown RBP11.47□□□□□ -0.57
LIMS2-210ENST00000413578 C19orf25Q9UFG5 118 aaPredicted RBP11.47□□□□□ -0.57
LIMS2-210ENST00000413578 TSR3Q9UJK0 312 aaKnown RBP11.47□□□□□ -0.57
LIMS2-210ENST00000413578 ZNF148Q9UQR1 794 aa11.47□□□□□ -0.57
LIMS2-210ENST00000413578 CAPN6Q9Y6Q1 641 aa11.47□□□□□ -0.57
LIMS2-210ENST00000413578 ITPR3Q14573 2671 aa11.46□□□□□ -0.57
LIMS2-210ENST00000413578 SPG11Q96JI7 2443 aa11.46□□□□□ -0.57
LIMS2-210ENST00000413578 CACNA1CQ13936 2221 aa11.46□□□□□ -0.57
LIMS2-210ENST00000413578 ZNF839A8K0R7 811 aa11.46□□□□□ -0.57
LIMS2-210ENST00000413578 GOLGA8KD6RF30 607 aa11.46□□□□□ -0.57
LIMS2-210ENST00000413578 GOLGA8TH3BQL2 631 aa11.46□□□□□ -0.57
LIMS2-210ENST00000413578 SMAPO00193 183 aa11.46□□□□□ -0.57
LIMS2-210ENST00000413578 VAPBO95292 243 aa11.46□□□□□ -0.57
LIMS2-210ENST00000413578 CATP04040 527 aaKnown RBP11.46□□□□□ -0.57
LIMS2-210ENST00000413578 OGNP20774 298 aaKnown RBP11.46□□□□□ -0.57
LIMS2-210ENST00000413578 PTMSP20962 102 aa11.46□□□□□ -0.57
LIMS2-210ENST00000413578 IMPA1P29218 277 aa11.46□□□□□ -0.57
LIMS2-210ENST00000413578 BCL6P41182 706 aa11.46□□□□□ -0.57
LIMS2-210ENST00000413578 SKIV2L2P42285 1042 aaKnown RBP11.46□□□□□ -0.57
LIMS2-210ENST00000413578 XCR1P46094 333 aa11.46□□□□□ -0.57
LIMS2-210ENST00000413578 NPY2RP49146 381 aa11.46□□□□□ -0.57
LIMS2-210ENST00000413578 AGTR2P50052 363 aa11.46□□□□□ -0.57
LIMS2-210ENST00000413578 ALDH6A1Q02252 535 aaKnown RBP11.46□□□□□ -0.57
LIMS2-210ENST00000413578 EXT1Q16394 746 aa11.46□□□□□ -0.57
LIMS2-210ENST00000413578 MEP1AQ16819 746 aa11.46□□□□□ -0.57
LIMS2-210ENST00000413578 KIAA0930Q6ICG6 404 aaPredicted RBP11.46□□□□□ -0.57
LIMS2-210ENST00000413578 MRNIPQ6NTE8 343 aa11.46□□□□□ -0.57
LIMS2-210ENST00000413578 TMEM214Q6NUQ4 689 aaKnown RBP11.46□□□□□ -0.57
LIMS2-210ENST00000413578 CES3Q6UWW8 571 aa11.46□□□□□ -0.57
LIMS2-210ENST00000413578 CENPUQ71F23 418 aa11.46□□□□□ -0.57
LIMS2-210ENST00000413578 FGD2Q7Z6J4 655 aa11.46□□□□□ -0.57
LIMS2-210ENST00000413578 DOLPP1Q86YN1 238 aa11.46□□□□□ -0.57
LIMS2-210ENST00000413578 SLC13A5Q86YT5 568 aaPredicted RBP11.46□□□□□ -0.57
LIMS2-210ENST00000413578 TMEM139Q8IV31 216 aa11.46□□□□□ -0.57
LIMS2-210ENST00000413578 SPNS2Q8IVW8 549 aa11.46□□□□□ -0.57
LIMS2-210ENST00000413578 LGI4Q8N135 537 aa11.46□□□□□ -0.57
LIMS2-210ENST00000413578 OR51Q1Q8NH59 317 aa11.46□□□□□ -0.57
LIMS2-210ENST00000413578 AGAP11Q8TF27 550 aa11.46□□□□□ -0.57
LIMS2-210ENST00000413578 ASB11Q8WXH4 323 aa11.46□□□□□ -0.57
LIMS2-210ENST00000413578 UTP23Q9BRU9 249 aaKnown RBP11.46□□□□□ -0.57
LIMS2-210ENST00000413578 TSPAN10Q9H1Z9 355 aaPredicted RBP11.46□□□□□ -0.57
LIMS2-210ENST00000413578 MCCC2Q9HCC0 563 aa11.46□□□□□ -0.57
LIMS2-210ENST00000413578 GPAMQ9HCL2 828 aa11.46□□□□□ -0.57
LIMS2-210ENST00000413578 KLHL1Q9NR64 748 aa11.46□□□□□ -0.57
LIMS2-210ENST00000413578 ANKRD10Q9NXR5 420 aa11.46□□□□□ -0.57
LIMS2-210ENST00000413578 CRYL1Q9Y2S2 319 aa11.46□□□□□ -0.57
LIMS2-210ENST00000413578 ASB1Q9Y576 335 aa11.46□□□□□ -0.57
LIMS2-210ENST00000413578 GABRR3A8MPY1 467 aa11.45□□□□□ -0.58
LIMS2-210ENST00000413578 NPIPA5E9PKD4 350 aa11.45□□□□□ -0.58
LIMS2-210ENST00000413578 E9PLN8 166 aa11.45□□□□□ -0.58
LIMS2-210ENST00000413578 FAM227AF5H4B4 570 aa11.45□□□□□ -0.58
LIMS2-210ENST00000413578 H7BY64 318 aa11.45□□□□□ -0.58
LIMS2-210ENST00000413578 GFYI3L273 518 aa11.45□□□□□ -0.58
LIMS2-210ENST00000413578 CDK2AP1O14519 115 aa11.45□□□□□ -0.58
LIMS2-210ENST00000413578 ZNHIT1O43257 154 aa11.45□□□□□ -0.58
LIMS2-210ENST00000413578 ASNA1O43681 348 aa11.45□□□□□ -0.58
LIMS2-210ENST00000413578 MLYCDO95822 493 aa11.45□□□□□ -0.58
LIMS2-210ENST00000413578 STATHP02808 62 aa11.45□□□□□ -0.58
LIMS2-210ENST00000413578 IGFBP2P18065 325 aa11.45□□□□□ -0.58
LIMS2-210ENST00000413578 IL1RNP18510 177 aa11.45□□□□□ -0.58
LIMS2-210ENST00000413578 CHRM3P20309 590 aa11.45□□□□□ -0.58
LIMS2-210ENST00000413578 EEF1DP29692 281 aaKnown RBP11.45□□□□□ -0.58
LIMS2-210ENST00000413578 RHAGQ02094 409 aa11.45□□□□□ -0.58
LIMS2-210ENST00000413578 TSTA3Q13630 321 aaPredicted RBP11.45□□□□□ -0.58
LIMS2-210ENST00000413578 SKOR2Q2VWA4 1001 aaPredicted RBP11.45□□□□□ -0.58
LIMS2-210ENST00000413578 MINDY4Q4G0A6 757 aa11.45□□□□□ -0.58
LIMS2-210ENST00000413578 RNFT1Q5M7Z0 435 aa11.45□□□□□ -0.58
LIMS2-210ENST00000413578 CYHR1Q6ZMK1 362 aa11.45□□□□□ -0.58
LIMS2-210ENST00000413578 GALNTL5Q7Z4T8 443 aa11.45□□□□□ -0.58
LIMS2-210ENST00000413578 SDCCAG8Q86SQ7 713 aaPredicted RBP11.45□□□□□ -0.58
LIMS2-210ENST00000413578 CDH24Q86UP0 819 aa11.45□□□□□ -0.58
LIMS2-210ENST00000413578 ZNF227Q86WZ6 799 aa11.45□□□□□ -0.58
LIMS2-210ENST00000413578 PDSS2Q86YH6 399 aa11.45□□□□□ -0.58
LIMS2-210ENST00000413578 CILP2Q8IUL8 1156 aa11.45□□□□□ -0.58
LIMS2-210ENST00000413578 CEP97Q8IW35 865 aa11.45□□□□□ -0.58
LIMS2-210ENST00000413578 GHDCQ8N2G8 530 aa11.45□□□□□ -0.58
LIMS2-210ENST00000413578 CCDC89Q8N998 374 aa11.45□□□□□ -0.58
LIMS2-210ENST00000413578 TMEM178AQ8NBL3 297 aa11.45□□□□□ -0.58
LIMS2-210ENST00000413578 PLPP5Q8NEB5 264 aa11.45□□□□□ -0.58
LIMS2-210ENST00000413578 TM4SF19Q96DZ7 209 aa11.45□□□□□ -0.58
LIMS2-210ENST00000413578 PRAP1Q96NZ9 151 aa11.45□□□□□ -0.58
LIMS2-210ENST00000413578 VKORC1Q9BQB6 163 aa11.45□□□□□ -0.58
LIMS2-210ENST00000413578 TRIM45Q9H8W5 580 aaPredicted RBP11.45□□□□□ -0.58
LIMS2-210ENST00000413578 KCNK13Q9HB14 408 aa11.45□□□□□ -0.58
LIMS2-210ENST00000413578 LANCL2Q9NS86 450 aa11.45□□□□□ -0.58
LIMS2-210ENST00000413578 TMEM184CQ9NVA4 438 aa11.45□□□□□ -0.58
LIMS2-210ENST00000413578 SYBUQ9NX95 663 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms