RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 FBXO15Q8NCQ5 510 aaPredicted RBP16.51■□□□□ 0.23
PTPRC-206ENST00000413409 GANCQ8TET4 914 aa16.51■□□□□ 0.23
PTPRC-206ENST00000413409 SKA2Q8WVK7 121 aaPredicted RBP16.51■□□□□ 0.23
PTPRC-206ENST00000413409 TMEM159Q96B96 161 aa16.51■□□□□ 0.23
PTPRC-206ENST00000413409 DUS3LQ96G46 650 aaKnown RBP16.51■□□□□ 0.23
PTPRC-206ENST00000413409 ZNF514Q96K75 400 aaPredicted RBP16.51■□□□□ 0.23
PTPRC-206ENST00000413409 DEPDC7Q96QD5 511 aa16.51■□□□□ 0.23
PTPRC-206ENST00000413409 C1orf50Q9BV19 199 aa16.51■□□□□ 0.23
PTPRC-206ENST00000413409 RSPH9Q9H1X1 276 aaPredicted RBP16.51■□□□□ 0.23
PTPRC-206ENST00000413409 MUC13Q9H3R2 512 aa16.51■□□□□ 0.23
PTPRC-206ENST00000413409 CAAP1Q9H8G2 361 aa16.51■□□□□ 0.23
PTPRC-206ENST00000413409 ACTR8Q9H981 624 aa16.51■□□□□ 0.23
PTPRC-206ENST00000413409 FBRSQ9HAH7 460 aa16.51■□□□□ 0.23
PTPRC-206ENST00000413409 FBXL12Q9NXK8 326 aa16.51■□□□□ 0.23
PTPRC-206ENST00000413409 KLQ9UEF7 1012 aa16.51■□□□□ 0.23
PTPRC-206ENST00000413409 EIF3LQ9Y262 564 aaKnown RBP16.51■□□□□ 0.23
PTPRC-206ENST00000413409 RNF11Q9Y3C5 154 aa16.51■□□□□ 0.23
PTPRC-206ENST00000413409 LRRK1Q38SD2 2015 aa16.51■□□□□ 0.23
PTPRC-206ENST00000413409 ANKRD12Q6UB98 2062 aa16.51■□□□□ 0.23
PTPRC-206ENST00000413409 PRSS51A0A1B0GVH4 220 aa16.5■□□□□ 0.23
PTPRC-206ENST00000413409 PMS2P1A4D2B8 440 aa16.5■□□□□ 0.23
PTPRC-206ENST00000413409 ASPDHA6ND91 283 aa16.5■□□□□ 0.23
PTPRC-206ENST00000413409 PRORSD1PA6NEY8 169 aa16.5■□□□□ 0.23
PTPRC-206ENST00000413409 CCDC154A6NI56 674 aa16.5■□□□□ 0.23
PTPRC-206ENST00000413409 OR2AG2A6NM03 316 aa16.5■□□□□ 0.23
PTPRC-206ENST00000413409 ARHGEF33A8MVX0 844 aa16.5■□□□□ 0.23
PTPRC-206ENST00000413409 LIN7AO14910 233 aaPredicted RBP16.5■□□□□ 0.23
PTPRC-206ENST00000413409 PEX1O43933 1283 aa16.5■□□□□ 0.23
PTPRC-206ENST00000413409 ACPPP15309 386 aa16.5■□□□□ 0.23
PTPRC-206ENST00000413409 MAP4P27816 1152 aaKnown RBP16.5■□□□□ 0.23
PTPRC-206ENST00000413409 GTF2A1P52655 376 aaPredicted RBP16.5■□□□□ 0.23
PTPRC-206ENST00000413409 METAP1P53582 386 aa16.5■□□□□ 0.23
PTPRC-206ENST00000413409 UFM1P61960 85 aa16.5■□□□□ 0.23
PTPRC-206ENST00000413409 CLN3Q13286 438 aa16.5■□□□□ 0.23
PTPRC-206ENST00000413409 AP5B1Q2VPB7 878 aa16.5■□□□□ 0.23
PTPRC-206ENST00000413409 C4orf17Q53FE4 359 aa16.5■□□□□ 0.23
PTPRC-206ENST00000413409 IGF2-ASQ6U949 168 aa16.5■□□□□ 0.23
PTPRC-206ENST00000413409 CYP20A1Q6UW02 462 aa16.5■□□□□ 0.23
PTPRC-206ENST00000413409 RNF111Q6ZNA4 994 aa16.5■□□□□ 0.23
PTPRC-206ENST00000413409 HIPK4Q8NE63 616 aa16.5■□□□□ 0.23
PTPRC-206ENST00000413409 CXorf40AQ8TE69 158 aa16.5■□□□□ 0.23
PTPRC-206ENST00000413409 LRRC58Q96CX6 371 aa16.5■□□□□ 0.23
PTPRC-206ENST00000413409 SLC46A1Q96NT5 459 aa16.5■□□□□ 0.23
PTPRC-206ENST00000413409 TRIM15Q9C019 465 aa16.5■□□□□ 0.23
PTPRC-206ENST00000413409 SNX6Q9UNH7 406 aa16.5■□□□□ 0.23
PTPRC-206ENST00000413409 SATB2Q9UPW6 733 aa16.5■□□□□ 0.23
PTPRC-206ENST00000413409 NCKAP1Q9Y2A7 1128 aa16.5■□□□□ 0.23
PTPRC-206ENST00000413409 POLR3HQ9Y535 204 aaPredicted RBP16.5■□□□□ 0.23
PTPRC-206ENST00000413409 ANKRD28O15084 1053 aa16.49■□□□□ 0.23
PTPRC-206ENST00000413409 AP1G1O43747 822 aa16.49■□□□□ 0.23
PTPRC-206ENST00000413409 RSL1D1O76021 490 aaKnown RBP16.49■□□□□ 0.23
PTPRC-206ENST00000413409 STAMBPO95630 424 aa16.49■□□□□ 0.23
PTPRC-206ENST00000413409 ERFP50548 548 aa16.49■□□□□ 0.23
PTPRC-206ENST00000413409 CCR5P51681 352 aa16.49■□□□□ 0.23
PTPRC-206ENST00000413409 RPL38P63173 70 aaKnown RBP16.49■□□□□ 0.23
PTPRC-206ENST00000413409 MRPS22P82650 360 aaKnown RBP16.49■□□□□ 0.23
PTPRC-206ENST00000413409 PLOD1Q02809 727 aaPredicted RBP16.49■□□□□ 0.23
PTPRC-206ENST00000413409 PCDH1Q08174 1060 aa16.49■□□□□ 0.23
PTPRC-206ENST00000413409 GTF2H3Q13889 308 aa16.49■□□□□ 0.23
PTPRC-206ENST00000413409 NFYCQ13952 458 aa16.49■□□□□ 0.23
PTPRC-206ENST00000413409 TLR1Q15399 786 aa16.49■□□□□ 0.23
PTPRC-206ENST00000413409 IMPG1Q17R60 797 aa16.49■□□□□ 0.23
PTPRC-206ENST00000413409 PTCHD3Q3KNS1 767 aa16.49■□□□□ 0.23
PTPRC-206ENST00000413409 C6orf10Q5SRN2 563 aa16.49■□□□□ 0.23
PTPRC-206ENST00000413409 ZNF648Q5T619 568 aaPredicted RBP16.49■□□□□ 0.23
PTPRC-206ENST00000413409 KBTBD2Q8IY47 623 aa16.49■□□□□ 0.23
PTPRC-206ENST00000413409 FAM9CQ8IZT9 166 aa16.49■□□□□ 0.23
PTPRC-206ENST00000413409 RNF148Q8N7C7 305 aa16.49■□□□□ 0.23
PTPRC-206ENST00000413409 BEND7Q8N7W2 519 aaPredicted RBP16.49■□□□□ 0.23
PTPRC-206ENST00000413409 GOLM1Q8NBJ4 401 aa16.49■□□□□ 0.23
PTPRC-206ENST00000413409 GLB1L3Q8NCI6 653 aaPredicted RBP16.49■□□□□ 0.23
PTPRC-206ENST00000413409 OR2T34Q8NGX1 318 aa16.49■□□□□ 0.23
PTPRC-206ENST00000413409 PROKR1Q8TCW9 393 aa16.49■□□□□ 0.23
PTPRC-206ENST00000413409 LINC00615Q96LM1 132 aaPredicted RBP16.49■□□□□ 0.23
PTPRC-206ENST00000413409 TEX37Q96LM6 180 aa16.49■□□□□ 0.23
PTPRC-206ENST00000413409 CCDC138Q96M89 665 aa16.49■□□□□ 0.23
PTPRC-206ENST00000413409 FOPNLQ96NB1 174 aa16.49■□□□□ 0.23
PTPRC-206ENST00000413409 ZBTB18Q99592 522 aa16.49■□□□□ 0.23
PTPRC-206ENST00000413409 LRTM1Q9HBL6 345 aa16.49■□□□□ 0.23
PTPRC-206ENST00000413409 C1orf109Q9NX04 203 aa16.49■□□□□ 0.23
PTPRC-206ENST00000413409 ZNF490Q9ULM2 529 aaPredicted RBP16.49■□□□□ 0.23
PTPRC-206ENST00000413409 ITPR2Q14571 2701 aa16.49■□□□□ 0.23
PTPRC-206ENST00000413409 A0A1W2PP55 124 aa16.48■□□□□ 0.23
PTPRC-206ENST00000413409 TCRBV3S1A0A5B6 114 aa16.48■□□□□ 0.23
PTPRC-206ENST00000413409 CLEC18AA5D8T8 446 aa16.48■□□□□ 0.23
PTPRC-206ENST00000413409 TMEM202A6NGA9 273 aa16.48■□□□□ 0.23
PTPRC-206ENST00000413409 NME4O00746 187 aa16.48■□□□□ 0.23
PTPRC-206ENST00000413409 FFAR3O14843 346 aa16.48■□□□□ 0.23
PTPRC-206ENST00000413409 MID1O15344 667 aa16.48■□□□□ 0.23
PTPRC-206ENST00000413409 GPR42O15529 346 aa16.48■□□□□ 0.23
PTPRC-206ENST00000413409 VEGFDO43915 354 aa16.48■□□□□ 0.23
PTPRC-206ENST00000413409 LZTS3O60299 673 aaPredicted RBP16.48■□□□□ 0.23
PTPRC-206ENST00000413409 DNAJA2O60884 412 aa16.48■□□□□ 0.23
PTPRC-206ENST00000413409 GIMD1P0DJR0 217 aa16.48■□□□□ 0.23
PTPRC-206ENST00000413409 SLC6A2P23975 617 aa16.48■□□□□ 0.23
PTPRC-206ENST00000413409 VARSP26640 1264 aaKnown RBP16.48■□□□□ 0.23
PTPRC-206ENST00000413409 IL12AP29459 219 aa16.48■□□□□ 0.23
PTPRC-206ENST00000413409 GPR1P46091 355 aa16.48■□□□□ 0.23
PTPRC-206ENST00000413409 GNPDA1P46926 289 aa16.48■□□□□ 0.23
PTPRC-206ENST00000413409 DAB2P98082 770 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms