RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 VCANP13611 3396 aa8.25□□□□□ -1.09
SYNE1-211ENST00000413186 A0A0J9YVX5 310 aa8.25□□□□□ -1.09
SYNE1-211ENST00000413186 PRSS38A1L453 326 aa8.25□□□□□ -1.09
SYNE1-211ENST00000413186 MYO1GB0I1T2 1018 aa8.25□□□□□ -1.09
SYNE1-211ENST00000413186 MANBAO00462 879 aa8.25□□□□□ -1.09
SYNE1-211ENST00000413186 ZNF682O95780 498 aa8.25□□□□□ -1.09
SYNE1-211ENST00000413186 CLPTM1O96005 669 aa8.25□□□□□ -1.09
SYNE1-211ENST00000413186 NTRK1P04629 796 aa8.25□□□□□ -1.09
SYNE1-211ENST00000413186 IL6P05231 212 aa8.25□□□□□ -1.09
SYNE1-211ENST00000413186 UBTFL6P0CB48 400 aaPredicted RBP8.25□□□□□ -1.09
SYNE1-211ENST00000413186 ZNF23P17027 643 aa8.25□□□□□ -1.09
SYNE1-211ENST00000413186 PRPS1L1P21108 318 aa8.25□□□□□ -1.09
SYNE1-211ENST00000413186 CPN2P22792 545 aa8.25□□□□□ -1.09
SYNE1-211ENST00000413186 GDF5P43026 501 aa8.25□□□□□ -1.09
SYNE1-211ENST00000413186 PLA2G16P53816 162 aa8.25□□□□□ -1.09
SYNE1-211ENST00000413186 PRKAG1P54619 331 aa8.25□□□□□ -1.09
SYNE1-211ENST00000413186 NUP107P57740 925 aa8.25□□□□□ -1.09
SYNE1-211ENST00000413186 HHEXQ03014 270 aa8.25□□□□□ -1.09
SYNE1-211ENST00000413186 DPTQ07507 201 aa8.25□□□□□ -1.09
SYNE1-211ENST00000413186 USP51Q70EK9 711 aa8.25□□□□□ -1.09
SYNE1-211ENST00000413186 ISCA2Q86U28 154 aa8.25□□□□□ -1.09
SYNE1-211ENST00000413186 PLXDC1Q8IUK5 500 aa8.25□□□□□ -1.09
SYNE1-211ENST00000413186 ETFBKMTQ8IXQ9 262 aa8.25□□□□□ -1.09
SYNE1-211ENST00000413186 RBM15BQ8NDT2 890 aaKnown RBP8.25□□□□□ -1.09
SYNE1-211ENST00000413186 C7orf57Q8NEG2 295 aa8.25□□□□□ -1.09
SYNE1-211ENST00000413186 ADCY4Q8NFM4 1077 aa8.25□□□□□ -1.09
SYNE1-211ENST00000413186 FAM81AQ8TBF8 368 aa8.25□□□□□ -1.09
SYNE1-211ENST00000413186 ZCCHC10Q8TBK6 192 aa8.25□□□□□ -1.09
SYNE1-211ENST00000413186 PLA2G2FQ9BZM2 168 aa8.25□□□□□ -1.09
SYNE1-211ENST00000413186 STRADBQ9C0K7 418 aa8.25□□□□□ -1.09
SYNE1-211ENST00000413186 TRPV5Q9NQA5 729 aa8.25□□□□□ -1.09
SYNE1-211ENST00000413186 EXD2Q9NVH0 621 aa8.25□□□□□ -1.09
SYNE1-211ENST00000413186 SMOXQ9NWM0 555 aa8.25□□□□□ -1.09
SYNE1-211ENST00000413186 USE1Q9NZ43 259 aa8.25□□□□□ -1.09
SYNE1-211ENST00000413186 MRTO4Q9UKD2 239 aaKnown RBP8.25□□□□□ -1.09
SYNE1-211ENST00000413186 DUSP12Q9UNI6 340 aa8.25□□□□□ -1.09
SYNE1-211ENST00000413186 ANGPT4Q9Y264 503 aa8.25□□□□□ -1.09
SYNE1-211ENST00000413186 PCDH7O60245 1069 aa8.25□□□□□ -1.09
SYNE1-211ENST00000413186 ENTPD5O75356 428 aa8.25□□□□□ -1.09
SYNE1-211ENST00000413186 PDE5AO76074 875 aa8.25□□□□□ -1.09
SYNE1-211ENST00000413186 TYRP1P17643 537 aa8.25□□□□□ -1.09
SYNE1-211ENST00000413186 AGXTP21549 392 aa8.25□□□□□ -1.09
SYNE1-211ENST00000413186 IDH3AP50213 366 aa8.25□□□□□ -1.09
SYNE1-211ENST00000413186 AFF3P51826 1226 aaKnown RBP8.25□□□□□ -1.09
SYNE1-211ENST00000413186 ADPRHP54922 357 aa8.25□□□□□ -1.09
SYNE1-211ENST00000413186 ACVR1Q04771 509 aa8.25□□□□□ -1.09
SYNE1-211ENST00000413186 ZNF542PQ5EBM4 170 aa8.25□□□□□ -1.09
SYNE1-211ENST00000413186 ZNF789Q5FWF6 425 aa8.25□□□□□ -1.09
SYNE1-211ENST00000413186 ASTLQ6HA08 431 aaPredicted RBP8.25□□□□□ -1.09
SYNE1-211ENST00000413186 CEP76Q8TAP6 659 aa8.25□□□□□ -1.09
SYNE1-211ENST00000413186 ADAMTS19Q8TE59 1207 aa8.25□□□□□ -1.09
SYNE1-211ENST00000413186 DEPDC7Q96QD5 511 aa8.25□□□□□ -1.09
SYNE1-211ENST00000413186 NDC1Q9BTX1 674 aa8.25□□□□□ -1.09
SYNE1-211ENST00000413186 ZNF304Q9HCX3 659 aa8.25□□□□□ -1.09
SYNE1-211ENST00000413186 EXOSC4Q9NPD3 245 aaKnown RBP8.25□□□□□ -1.09
SYNE1-211ENST00000413186 RPS6KB2Q9UBS0 482 aa8.25□□□□□ -1.09
SYNE1-211ENST00000413186 PHF11Q9UIL8 331 aa8.25□□□□□ -1.09
SYNE1-211ENST00000413186 ANAPC2Q9UJX6 822 aa8.25□□□□□ -1.09
SYNE1-211ENST00000413186 UQCRBP14927 111 aa8.24□□□□□ -1.09
SYNE1-211ENST00000413186 AOC1P19801 751 aa8.24□□□□□ -1.09
SYNE1-211ENST00000413186 AOAHP28039 575 aa8.24□□□□□ -1.09
SYNE1-211ENST00000413186 CRATP43155 626 aa8.24□□□□□ -1.09
SYNE1-211ENST00000413186 CLK3P49761 638 aaKnown RBP8.24□□□□□ -1.09
SYNE1-211ENST00000413186 KIAA1024LP59773 190 aa8.24□□□□□ -1.09
SYNE1-211ENST00000413186 AADACL4Q5VUY2 407 aa8.24□□□□□ -1.09
SYNE1-211ENST00000413186 CHERPQ8IWX8 916 aaKnown RBP8.24□□□□□ -1.09
SYNE1-211ENST00000413186 SLC13A3Q8WWT9 602 aa8.24□□□□□ -1.09
SYNE1-211ENST00000413186 LRCH3Q96II8 777 aa8.24□□□□□ -1.09
SYNE1-211ENST00000413186 SMIM14Q96QK8 99 aa8.24□□□□□ -1.09
SYNE1-211ENST00000413186 DPYSL5Q9BPU6 564 aa8.24□□□□□ -1.09
SYNE1-211ENST00000413186 IRF2BPLQ9H1B7 796 aa8.24□□□□□ -1.09
SYNE1-211ENST00000413186 SLC6A15Q9H2J7 730 aa8.24□□□□□ -1.09
SYNE1-211ENST00000413186 CUEDC1Q9NWM3 386 aaPredicted RBP8.24□□□□□ -1.09
SYNE1-211ENST00000413186 OR10H1Q9Y4A9 318 aa8.24□□□□□ -1.09
SYNE1-211ENST00000413186 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.24□□□□□ -1.09
SYNE1-211ENST00000413186 TMEM150CB9EJG8 249 aa8.24□□□□□ -1.09
SYNE1-211ENST00000413186 C9J4A7 227 aa8.24□□□□□ -1.09
SYNE1-211ENST00000413186 FZD6O60353 706 aa8.24□□□□□ -1.09
SYNE1-211ENST00000413186 SPARCP09486 303 aa8.24□□□□□ -1.09
SYNE1-211ENST00000413186 CDH1P12830 882 aa8.24□□□□□ -1.09
SYNE1-211ENST00000413186 NDUFV2P19404 249 aa8.24□□□□□ -1.09
SYNE1-211ENST00000413186 ITGA3P26006 1051 aa8.24□□□□□ -1.09
SYNE1-211ENST00000413186 STOMP27105 288 aa8.24□□□□□ -1.09
SYNE1-211ENST00000413186 ERFP50548 548 aa8.24□□□□□ -1.09
SYNE1-211ENST00000413186 ZNF33BQ06732 778 aa8.24□□□□□ -1.09
SYNE1-211ENST00000413186 ATP1A4Q13733 1029 aa8.24□□□□□ -1.09
SYNE1-211ENST00000413186 SPATS1Q496A3 300 aa8.24□□□□□ -1.09
SYNE1-211ENST00000413186 PHF19Q5T6S3 580 aa8.24□□□□□ -1.09
SYNE1-211ENST00000413186 SUSD1Q6UWL2 747 aa8.24□□□□□ -1.09
SYNE1-211ENST00000413186 TMEFF1Q8IYR6 380 aa8.24□□□□□ -1.09
SYNE1-211ENST00000413186 FUBP1Q96AE4 644 aaKnown RBP8.24□□□□□ -1.09
SYNE1-211ENST00000413186 RCN3Q96D15 328 aa8.24□□□□□ -1.09
SYNE1-211ENST00000413186 ALG14Q96F25 216 aa8.24□□□□□ -1.09
SYNE1-211ENST00000413186 ZBED6CLQ96FA7 236 aaPredicted RBP8.24□□□□□ -1.09
SYNE1-211ENST00000413186 RBM18Q96H35 190 aaKnown RBP8.24□□□□□ -1.09
SYNE1-211ENST00000413186 MRGPRX1Q96LB2 322 aa8.24□□□□□ -1.09
SYNE1-211ENST00000413186 RPP25Q9BUL9 199 aaKnown RBP8.24□□□□□ -1.09
SYNE1-211ENST00000413186 A0A0U1RQS6 177 aa8.24□□□□□ -1.09
SYNE1-211ENST00000413186 KHNYNO15037 678 aaKnown RBP8.24□□□□□ -1.09
SYNE1-211ENST00000413186 CASC3O15234 703 aaKnown RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms