RNA–Protein interactions for RNA: ENST00000412587.5

PBRM1-209, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 4,766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-209ENST00000412587 S100A8P05109 93 aa8.28□□□□□ -1.08
PBRM1-209ENST00000412587 HNRNPLP14866 589 aaKnown RBP eCLIP8.28□□□□□ -1.08
PBRM1-209ENST00000412587 DDX6P26196 483 aaKnown RBP eCLIP8.28□□□□□ -1.08
PBRM1-209ENST00000412587 MLLT6P55198 1093 aaPredicted RBP8.28□□□□□ -1.08
PBRM1-209ENST00000412587 EEFSECP57772 596 aaKnown RBP8.28□□□□□ -1.08
PBRM1-209ENST00000412587 SLC3A1Q07837 685 aa8.28□□□□□ -1.08
PBRM1-209ENST00000412587 TMEM198Q66K66 360 aa8.28□□□□□ -1.08
PBRM1-209ENST00000412587 FAM198BQ6UWH4 519 aa8.28□□□□□ -1.08
PBRM1-209ENST00000412587 DPPA2Q7Z7J5 298 aa8.28□□□□□ -1.08
PBRM1-209ENST00000412587 CCDC71Q8IV32 467 aaPredicted RBP8.28□□□□□ -1.08
PBRM1-209ENST00000412587 CYP4Z2PQ8N1L4 340 aa8.28□□□□□ -1.08
PBRM1-209ENST00000412587 TTLQ8NG68 377 aa8.28□□□□□ -1.08
PBRM1-209ENST00000412587 ZFAND1Q8TCF1 268 aa8.28□□□□□ -1.08
PBRM1-209ENST00000412587 ZNF641Q96N77 438 aaPredicted RBP8.28□□□□□ -1.08
PBRM1-209ENST00000412587 RHBGQ9H310 441 aa8.28□□□□□ -1.08
PBRM1-209ENST00000412587 SOHLH2Q9NX45 425 aa8.28□□□□□ -1.08
PBRM1-209ENST00000412587 DTLQ9NZJ0 730 aa8.28□□□□□ -1.08
PBRM1-209ENST00000412587 PDP1Q9P0J1 537 aaPredicted RBP8.28□□□□□ -1.08
PBRM1-209ENST00000412587 KLHL21Q9UJP4 597 aa8.28□□□□□ -1.08
PBRM1-209ENST00000412587 PCDHB3Q9Y5E6 796 aa8.28□□□□□ -1.08
PBRM1-209ENST00000412587 PCDHB1Q9Y5F3 818 aa8.28□□□□□ -1.08
PBRM1-209ENST00000412587 CRYBG1Q9Y4K1 1723 aa8.28□□□□□ -1.08
PBRM1-209ENST00000412587 BAZ2AQ9UIF9 1905 aaKnown RBP8.28□□□□□ -1.08
PBRM1-209ENST00000412587 C7orf72A4D263 438 aa8.27□□□□□ -1.08
PBRM1-209ENST00000412587 TXNL1O43396 289 aa8.27□□□□□ -1.08
PBRM1-209ENST00000412587 MT-CYBP00156 380 aaPredicted RBP8.27□□□□□ -1.08
PBRM1-209ENST00000412587 PIM1P11309 404 aaPredicted RBP8.27□□□□□ -1.08
PBRM1-209ENST00000412587 CD9P21926 228 aa8.27□□□□□ -1.08
PBRM1-209ENST00000412587 HTR2AP28223 471 aa8.27□□□□□ -1.08
PBRM1-209ENST00000412587 ACADLP28330 430 aa8.27□□□□□ -1.08
PBRM1-209ENST00000412587 SPAM1P38567 509 aa8.27□□□□□ -1.08
PBRM1-209ENST00000412587 PSMD8P48556 350 aa8.27□□□□□ -1.08
PBRM1-209ENST00000412587 SLC11A1P49279 550 aa8.27□□□□□ -1.08
PBRM1-209ENST00000412587 DGKGP49619 791 aa8.27□□□□□ -1.08
PBRM1-209ENST00000412587 FGL1Q08830 312 aa8.27□□□□□ -1.08
PBRM1-209ENST00000412587 DPYSL2Q16555 572 aa8.27□□□□□ -1.08
PBRM1-209ENST00000412587 CPSF6Q16630 551 aaKnown RBP eCLIP8.27□□□□□ -1.08
PBRM1-209ENST00000412587 SLC36A3Q495N2 470 aa8.27□□□□□ -1.08
PBRM1-209ENST00000412587 ZNF782Q6ZMW2 699 aaPredicted RBP8.27□□□□□ -1.08
PBRM1-209ENST00000412587 CUZD1Q86UP6 607 aa8.27□□□□□ -1.08
PBRM1-209ENST00000412587 GALNT13Q8IUC8 556 aa8.27□□□□□ -1.08
PBRM1-209ENST00000412587 GPALPP1Q8IXQ4 340 aa8.27□□□□□ -1.08
PBRM1-209ENST00000412587 IZUMO1Q8IYV9 350 aa8.27□□□□□ -1.08
PBRM1-209ENST00000412587 BEND7Q8N7W2 519 aaPredicted RBP8.27□□□□□ -1.08
PBRM1-209ENST00000412587 MAFIPQ8WZ33 124 aa8.27□□□□□ -1.08
PBRM1-209ENST00000412587 SGCDQ92629 289 aa8.27□□□□□ -1.08
PBRM1-209ENST00000412587 C10orf90Q96M02 699 aa8.27□□□□□ -1.08
PBRM1-209ENST00000412587 BTBD2Q9BX70 525 aa8.27□□□□□ -1.08
PBRM1-209ENST00000412587 BCO2Q9BYV7 579 aa8.27□□□□□ -1.08
PBRM1-209ENST00000412587 SLC39A8Q9C0K1 460 aa8.27□□□□□ -1.08
PBRM1-209ENST00000412587 GPR88Q9GZN0 384 aa8.27□□□□□ -1.08
PBRM1-209ENST00000412587 PPP4R1LQ9P1A2 415 aa8.27□□□□□ -1.08
PBRM1-209ENST00000412587 SAMD4AQ9UPU9 718 aaKnown RBP8.27□□□□□ -1.08
PBRM1-209ENST00000412587 TLR6Q9Y2C9 796 aa8.27□□□□□ -1.08
PBRM1-209ENST00000412587 MFHAS1Q9Y4C4 1052 aa8.27□□□□□ -1.08
PBRM1-209ENST00000412587 STYXL1Q9Y6J8 313 aa8.27□□□□□ -1.08
PBRM1-209ENST00000412587 LOC105371267A0A1B0GV96 52 aa8.27□□□□□ -1.09
PBRM1-209ENST00000412587 PGRMC2O15173 223 aa8.27□□□□□ -1.09
PBRM1-209ENST00000412587 ITGB1P05556 798 aa8.27□□□□□ -1.09
PBRM1-209ENST00000412587 MLLT3P42568 568 aaPredicted RBP8.27□□□□□ -1.09
PBRM1-209ENST00000412587 RGS1Q08116 209 aa8.27□□□□□ -1.09
PBRM1-209ENST00000412587 ZNF169Q14929 603 aaPredicted RBP8.27□□□□□ -1.09
PBRM1-209ENST00000412587 XKR6Q5GH73 641 aa8.27□□□□□ -1.09
PBRM1-209ENST00000412587 SCIMPQ6UWF3 145 aa8.27□□□□□ -1.09
PBRM1-209ENST00000412587 CELF2-AS1Q8N7Q2 184 aa8.27□□□□□ -1.09
PBRM1-209ENST00000412587 NIPA2Q8N8Q9 360 aa8.27□□□□□ -1.09
PBRM1-209ENST00000412587 SH3RF2Q8TEC5 729 aa8.27□□□□□ -1.09
PBRM1-209ENST00000412587 MFSD3Q96ES6 412 aa8.27□□□□□ -1.09
PBRM1-209ENST00000412587 TPD52L3Q96J77 140 aa8.27□□□□□ -1.09
PBRM1-209ENST00000412587 COL21A1Q96P44 957 aa8.27□□□□□ -1.09
PBRM1-209ENST00000412587 S100A13Q99584 98 aa8.27□□□□□ -1.09
PBRM1-209ENST00000412587 EVA1BQ9NVM1 165 aa8.27□□□□□ -1.09
PBRM1-209ENST00000412587 GFOD1Q9NXC2 390 aa8.27□□□□□ -1.09
PBRM1-209ENST00000412587 COMMD3Q9UBI1 195 aa8.27□□□□□ -1.09
PBRM1-209ENST00000412587 HCN2Q9UL51 889 aa8.27□□□□□ -1.09
PBRM1-209ENST00000412587 FCF1Q9Y324 198 aaKnown RBP8.27□□□□□ -1.09
PBRM1-209ENST00000412587 PCDHGB2Q9Y5G2 931 aa8.27□□□□□ -1.09
PBRM1-209ENST00000412587 SCO2O43819 266 aa8.27□□□□□ -1.09
PBRM1-209ENST00000412587 SCELO95171 688 aa8.27□□□□□ -1.09
PBRM1-209ENST00000412587 DHRS4L1P0CG22 281 aa8.27□□□□□ -1.09
PBRM1-209ENST00000412587 TLX1P31314 330 aaPredicted RBP8.27□□□□□ -1.09
PBRM1-209ENST00000412587 CPOXP36551 454 aa8.27□□□□□ -1.09
PBRM1-209ENST00000412587 CDKN2CP42773 168 aa8.27□□□□□ -1.09
PBRM1-209ENST00000412587 NOVP48745 357 aa8.27□□□□□ -1.09
PBRM1-209ENST00000412587 CXCR3P49682 368 aa8.27□□□□□ -1.09
PBRM1-209ENST00000412587 RPS24P62847 133 aaKnown RBP8.27□□□□□ -1.09
PBRM1-209ENST00000412587 PIGFQ07326 219 aa8.27□□□□□ -1.09
PBRM1-209ENST00000412587 FOXM1Q08050 763 aa8.27□□□□□ -1.09
PBRM1-209ENST00000412587 IRAK1BP1Q5VVH5 260 aa8.27□□□□□ -1.09
PBRM1-209ENST00000412587 PGAP1Q75T13 922 aa8.27□□□□□ -1.09
PBRM1-209ENST00000412587 PRSS42Q7Z5A4 293 aa8.27□□□□□ -1.09
PBRM1-209ENST00000412587 PARP16Q8N5Y8 322 aa8.27□□□□□ -1.09
PBRM1-209ENST00000412587 ARL6IP6Q8N6S5 226 aa8.27□□□□□ -1.09
PBRM1-209ENST00000412587 TXNDC5Q8NBS9 432 aaKnown RBP8.27□□□□□ -1.09
PBRM1-209ENST00000412587 ZNF671Q8TAW3 534 aa8.27□□□□□ -1.09
PBRM1-209ENST00000412587 RPL10LQ96L21 214 aaKnown RBP8.27□□□□□ -1.09
PBRM1-209ENST00000412587 SECISBP2Q96T21 854 aaKnown RBP8.27□□□□□ -1.09
PBRM1-209ENST00000412587 MMP28Q9H239 520 aa8.27□□□□□ -1.09
PBRM1-209ENST00000412587 SOX17Q9H6I2 414 aaPredicted RBP8.27□□□□□ -1.09
PBRM1-209ENST00000412587 GKN1Q9NS71 199 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms