RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 FADS6Q8N9I5 356 aa4.24□□□□□ -1.73
BRCA1-204ENST00000412061 CCDC63Q8NA47 563 aa4.24□□□□□ -1.73
BRCA1-204ENST00000412061 SMPDL3BQ92485 455 aa4.24□□□□□ -1.73
BRCA1-204ENST00000412061 RND1Q92730 232 aa4.24□□□□□ -1.73
BRCA1-204ENST00000412061 GGHQ92820 318 aa4.24□□□□□ -1.73
BRCA1-204ENST00000412061 P2RX5Q93086 422 aa4.24□□□□□ -1.73
BRCA1-204ENST00000412061 TAAR8Q969N4 342 aa4.24□□□□□ -1.73
BRCA1-204ENST00000412061 FBXO32Q969P5 355 aa4.24□□□□□ -1.73
BRCA1-204ENST00000412061 WBP2Q969T9 261 aa4.24□□□□□ -1.73
BRCA1-204ENST00000412061 AZIN2Q96A70 460 aa4.24□□□□□ -1.73
BRCA1-204ENST00000412061 MTERF3Q96E29 417 aa4.24□□□□□ -1.73
BRCA1-204ENST00000412061 THOC3Q96J01 351 aaKnown RBP4.24□□□□□ -1.73
BRCA1-204ENST00000412061 RPGRIP1Q96KN7 1286 aa4.24□□□□□ -1.73
BRCA1-204ENST00000412061 TAAR6Q96RI8 345 aa4.24□□□□□ -1.73
BRCA1-204ENST00000412061 SECISBP2Q96T21 854 aaKnown RBP4.24□□□□□ -1.73
BRCA1-204ENST00000412061 CDK19Q9BWU1 502 aa4.24□□□□□ -1.73
BRCA1-204ENST00000412061 CAPS2Q9BXY5 557 aa4.24□□□□□ -1.73
BRCA1-204ENST00000412061 NFKBIZQ9BYH8 718 aa4.24□□□□□ -1.73
BRCA1-204ENST00000412061 PLAC1Q9HBJ0 212 aa4.24□□□□□ -1.73
BRCA1-204ENST00000412061 YAE1D1Q9NRH1 226 aa4.24□□□□□ -1.73
BRCA1-204ENST00000412061 MRPL17Q9NRX2 175 aaKnown RBP4.24□□□□□ -1.73
BRCA1-204ENST00000412061 HOXC10Q9NYD6 342 aa4.24□□□□□ -1.73
BRCA1-204ENST00000412061 ATXN10Q9UBB4 475 aa4.24□□□□□ -1.73
BRCA1-204ENST00000412061 FBXL2Q9UKC9 423 aa4.24□□□□□ -1.73
BRCA1-204ENST00000412061 CHMP2BQ9UQN3 213 aa4.24□□□□□ -1.73
BRCA1-204ENST00000412061 PAM16Q9Y3D7 125 aa4.24□□□□□ -1.73
BRCA1-204ENST00000412061 OR2M5A3KFT3 312 aa4.23□□□□□ -1.73
BRCA1-204ENST00000412061 WDR91A4D1P6 747 aa4.23□□□□□ -1.73
BRCA1-204ENST00000412061 FAM47DPA6NHR8 397 aa4.23□□□□□ -1.73
BRCA1-204ENST00000412061 SLC15A5A6NIM6 579 aa4.23□□□□□ -1.73
BRCA1-204ENST00000412061 E9PBE3 544 aa4.23□□□□□ -1.73
BRCA1-204ENST00000412061 K7EQM0 130 aa4.23□□□□□ -1.73
BRCA1-204ENST00000412061 WNT9BO14905 357 aa4.23□□□□□ -1.73
BRCA1-204ENST00000412061 SLC22A2O15244 555 aa4.23□□□□□ -1.73
BRCA1-204ENST00000412061 RPS6KA5O75582 802 aa4.23□□□□□ -1.73
BRCA1-204ENST00000412061 TOM1L1O75674 476 aa4.23□□□□□ -1.73
BRCA1-204ENST00000412061 CHRNGP07510 517 aa4.23□□□□□ -1.73
BRCA1-204ENST00000412061 ZCCHC18P0CG32 403 aa4.23□□□□□ -1.73
BRCA1-204ENST00000412061 SP9P0CG40 484 aa4.23□□□□□ -1.73
BRCA1-204ENST00000412061 DLATP10515 647 aaKnown RBP4.23□□□□□ -1.73
BRCA1-204ENST00000412061 PAICSP22234 425 aaKnown RBP4.23□□□□□ -1.73
BRCA1-204ENST00000412061 HNRNPH1P31943 449 aaKnown RBP4.23□□□□□ -1.73
BRCA1-204ENST00000412061 ARRB2P32121 409 aa4.23□□□□□ -1.73
BRCA1-204ENST00000412061 OTX2P32243 289 aa4.23□□□□□ -1.73
BRCA1-204ENST00000412061 TAS2R38P59533 333 aa4.23□□□□□ -1.73
BRCA1-204ENST00000412061 ROR2Q01974 943 aaKnown RBP4.23□□□□□ -1.73
BRCA1-204ENST00000412061 DSC1Q08554 894 aa4.23□□□□□ -1.73
BRCA1-204ENST00000412061 CTTNQ14247 550 aaKnown RBP4.23□□□□□ -1.73
BRCA1-204ENST00000412061 PDIA5Q14554 519 aa4.23□□□□□ -1.73
BRCA1-204ENST00000412061 RFTN1Q14699 578 aaPredicted RBP4.23□□□□□ -1.73
BRCA1-204ENST00000412061 KRT31Q15323 416 aa4.23□□□□□ -1.73
BRCA1-204ENST00000412061 NPTX1Q15818 432 aa4.23□□□□□ -1.73
BRCA1-204ENST00000412061 PDK4Q16654 411 aa4.23□□□□□ -1.73
BRCA1-204ENST00000412061 ODF3L2Q3SX64 289 aa4.23□□□□□ -1.73
BRCA1-204ENST00000412061 SYT14P1Q58G82 188 aa4.23□□□□□ -1.73
BRCA1-204ENST00000412061 TMEM41BQ5BJD5 291 aa4.23□□□□□ -1.73
BRCA1-204ENST00000412061 FSCBQ5H9T9 825 aa4.23□□□□□ -1.73
BRCA1-204ENST00000412061 SUSD4Q5VX71 490 aa4.23□□□□□ -1.73
BRCA1-204ENST00000412061 LYSMD4Q5XG99 296 aa4.23□□□□□ -1.73
BRCA1-204ENST00000412061 NCR3LG1Q68D85 454 aa4.23□□□□□ -1.73
BRCA1-204ENST00000412061 KLHL10Q6JEL2 608 aa4.23□□□□□ -1.73
BRCA1-204ENST00000412061 KCTD18Q6PI47 426 aaPredicted RBP4.23□□□□□ -1.73
BRCA1-204ENST00000412061 OTUD6AQ7L8S5 288 aa4.23□□□□□ -1.73
BRCA1-204ENST00000412061 ERASQ7Z444 233 aa4.23□□□□□ -1.73
BRCA1-204ENST00000412061 LUZP1Q86V48 1076 aa4.23□□□□□ -1.73
BRCA1-204ENST00000412061 COMMD2Q86X83 199 aa4.23□□□□□ -1.73
BRCA1-204ENST00000412061 GRAMD2AQ8IUY3 354 aa4.23□□□□□ -1.73
BRCA1-204ENST00000412061 BBS5Q8N3I7 341 aa4.23□□□□□ -1.73
BRCA1-204ENST00000412061 RYBPQ8N488 228 aaPredicted RBP4.23□□□□□ -1.73
BRCA1-204ENST00000412061 THAP8Q8NA92 274 aa4.23□□□□□ -1.73
BRCA1-204ENST00000412061 MINDY2Q8NBR6 621 aa4.23□□□□□ -1.73
BRCA1-204ENST00000412061 ZNF671Q8TAW3 534 aa4.23□□□□□ -1.73
BRCA1-204ENST00000412061 DQX1Q8TE96 717 aaKnown RBP4.23□□□□□ -1.73
BRCA1-204ENST00000412061 ANKRD49Q8WVL7 239 aa4.23□□□□□ -1.73
BRCA1-204ENST00000412061 HAS2Q92819 552 aa4.23□□□□□ -1.73
BRCA1-204ENST00000412061 PYCR2Q96C36 320 aa4.23□□□□□ -1.73
BRCA1-204ENST00000412061 THOC1Q96FV9 657 aaKnown RBP4.23□□□□□ -1.73
BRCA1-204ENST00000412061 URB1-AS1Q96HZ7 61 aa4.23□□□□□ -1.73
BRCA1-204ENST00000412061 ZNF607Q96SK3 696 aa4.23□□□□□ -1.73
BRCA1-204ENST00000412061 KXD1Q9BQD3 176 aa4.23□□□□□ -1.73
BRCA1-204ENST00000412061 FICDQ9BVA6 458 aa4.23□□□□□ -1.73
BRCA1-204ENST00000412061 TRMT61BQ9BVS5 477 aaKnown RBP4.23□□□□□ -1.73
BRCA1-204ENST00000412061 TBC1D10AQ9BXI6 508 aa4.23□□□□□ -1.73
BRCA1-204ENST00000412061 GON7Q9BXV9 100 aa4.23□□□□□ -1.73
BRCA1-204ENST00000412061 PRRG4Q9BZD6 226 aa4.23□□□□□ -1.73
BRCA1-204ENST00000412061 WWTR1Q9GZV5 400 aa4.23□□□□□ -1.73
BRCA1-204ENST00000412061 GPR173Q9NS66 373 aa4.23□□□□□ -1.73
BRCA1-204ENST00000412061 HOMER3Q9NSC5 361 aa4.23□□□□□ -1.73
BRCA1-204ENST00000412061 COPS7AQ9UBW8 275 aa4.23□□□□□ -1.73
BRCA1-204ENST00000412061 NOCTQ9UK39 431 aaKnown RBP4.23□□□□□ -1.73
BRCA1-204ENST00000412061 MAB21L2Q9Y586 359 aa4.23□□□□□ -1.73
BRCA1-204ENST00000412061 ABCC4O15439 1325 aa4.23□□□□□ -1.73
BRCA1-204ENST00000412061 TTC41PQ6P2S7 1318 aa4.23□□□□□ -1.73
BRCA1-204ENST00000412061 PRAG1Q86YV5 1406 aa4.23□□□□□ -1.73
BRCA1-204ENST00000412061 TRAV24A0A0B4J272 114 aa4.22□□□□□ -1.73
BRCA1-204ENST00000412061 A0A1B0GUL7 405 aa4.22□□□□□ -1.73
BRCA1-204ENST00000412061 HYKKA2RU49 373 aa4.22□□□□□ -1.73
BRCA1-204ENST00000412061 BECN2A8MW95 431 aa4.22□□□□□ -1.73
BRCA1-204ENST00000412061 H0Y8G0 127 aa4.22□□□□□ -1.73
BRCA1-204ENST00000412061 ADAM12O43184 909 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms