RNA–Protein interactions for RNA: ENST00000411423.1

SF3A1-202, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 4

Gene SF3A1, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-202ENST00000411423 CYS1Q717R9 158 aa18.09■□□□□ 0.49
SF3A1-202ENST00000411423 CCDC25Q86WR0 208 aa18.09■□□□□ 0.49
SF3A1-202ENST00000411423 ZC3H7AQ8IWR0 971 aaKnown RBP18.09■□□□□ 0.49
SF3A1-202ENST00000411423 NKAPQ8N5F7 415 aaKnown RBP18.09■□□□□ 0.49
SF3A1-202ENST00000411423 ABHD11Q8NFV4 315 aa18.09■□□□□ 0.49
SF3A1-202ENST00000411423 NEIL2Q969S2 332 aa18.09■□□□□ 0.49
SF3A1-202ENST00000411423 MIB2Q96AX9 1013 aa18.09■□□□□ 0.49
SF3A1-202ENST00000411423 MVB12AQ96EY5 273 aa18.09■□□□□ 0.49
SF3A1-202ENST00000411423 TSNARE1Q96NA8 513 aa18.09■□□□□ 0.49
SF3A1-202ENST00000411423 RBBP8Q99708 897 aa18.09■□□□□ 0.49
SF3A1-202ENST00000411423 DRC3Q9H069 523 aa18.09■□□□□ 0.49
SF3A1-202ENST00000411423 RAB17Q9H0T7 212 aa18.09■□□□□ 0.49
SF3A1-202ENST00000411423 CLMPQ9H6B4 373 aa18.09■□□□□ 0.49
SF3A1-202ENST00000411423 GPAMQ9HCL2 828 aa18.09■□□□□ 0.49
SF3A1-202ENST00000411423 SEMA3GQ9NS98 782 aa18.09■□□□□ 0.49
SF3A1-202ENST00000411423 NSMCE4AQ9NXX6 385 aa18.09■□□□□ 0.49
SF3A1-202ENST00000411423 TRPC4Q9UBN4 977 aa18.09■□□□□ 0.49
SF3A1-202ENST00000411423 C3orf18Q9UK00 162 aa18.09■□□□□ 0.49
SF3A1-202ENST00000411423 OARD1Q9Y530 152 aa18.09■□□□□ 0.49
SF3A1-202ENST00000411423 JRKO75564 520 aa18.08■□□□□ 0.48
SF3A1-202ENST00000411423 IL1RNP18510 177 aa18.08■□□□□ 0.48
SF3A1-202ENST00000411423 CCND1P24385 295 aa18.08■□□□□ 0.48
SF3A1-202ENST00000411423 OCA2Q04671 838 aa18.08■□□□□ 0.48
SF3A1-202ENST00000411423 FAM53BQ14153 422 aa18.08■□□□□ 0.48
SF3A1-202ENST00000411423 RBBP7Q16576 425 aa18.08■□□□□ 0.48
SF3A1-202ENST00000411423 VWA5B1Q5TIE3 1220 aa18.08■□□□□ 0.48
SF3A1-202ENST00000411423 ATG9BQ674R7 924 aa18.08■□□□□ 0.48
SF3A1-202ENST00000411423 PDSS2Q86YH6 399 aa18.08■□□□□ 0.48
SF3A1-202ENST00000411423 MFSD9Q8NBP5 474 aa18.08■□□□□ 0.48
SF3A1-202ENST00000411423 CLEC1AQ8NC01 280 aa18.08■□□□□ 0.48
SF3A1-202ENST00000411423 ZCCHC10Q8TBK6 192 aa18.08■□□□□ 0.48
SF3A1-202ENST00000411423 NACC2Q96BF6 587 aa18.08■□□□□ 0.48
SF3A1-202ENST00000411423 GPR22Q99680 433 aa18.08■□□□□ 0.48
SF3A1-202ENST00000411423 CPNE1Q99829 537 aa18.08■□□□□ 0.48
SF3A1-202ENST00000411423 HAUS8Q9BT25 410 aa18.08■□□□□ 0.48
SF3A1-202ENST00000411423 YIPF2Q9BWQ6 316 aa18.08■□□□□ 0.48
SF3A1-202ENST00000411423 PHACTR1Q9C0D0 580 aa18.08■□□□□ 0.48
SF3A1-202ENST00000411423 POPDC3Q9HBV1 291 aa18.08■□□□□ 0.48
SF3A1-202ENST00000411423 PCDHGB7Q9Y5F8 929 aa18.08■□□□□ 0.48
SF3A1-202ENST00000411423 DNAJB6O75190 326 aa18.07■□□□□ 0.48
SF3A1-202ENST00000411423 B3GALT4O96024 378 aa18.07■□□□□ 0.48
SF3A1-202ENST00000411423 GP5P40197 560 aa18.07■□□□□ 0.48
SF3A1-202ENST00000411423 GDF5P43026 501 aa18.07■□□□□ 0.48
SF3A1-202ENST00000411423 POU4F1Q01851 419 aa18.07■□□□□ 0.48
SF3A1-202ENST00000411423 CAV1Q03135 178 aa18.07■□□□□ 0.48
SF3A1-202ENST00000411423 SLC6A19Q695T7 634 aa18.07■□□□□ 0.48
SF3A1-202ENST00000411423 FAAH2Q6GMR7 532 aa18.07■□□□□ 0.48
SF3A1-202ENST00000411423 JMJD6Q6NYC1 403 aaPredicted RBP18.07■□□□□ 0.48
SF3A1-202ENST00000411423 ASPGQ86U10 573 aa18.07■□□□□ 0.48
SF3A1-202ENST00000411423 THOC6Q86W42 341 aaKnown RBP18.07■□□□□ 0.48
SF3A1-202ENST00000411423 PARP9Q8IXQ6 854 aa18.07■□□□□ 0.48
SF3A1-202ENST00000411423 NOA1Q8NC60 698 aaKnown RBP18.07■□□□□ 0.48
SF3A1-202ENST00000411423 FBF1Q8TES7 1133 aa18.07■□□□□ 0.48
SF3A1-202ENST00000411423 ANKRD7Q92527 254 aa18.07■□□□□ 0.48
SF3A1-202ENST00000411423 THAP11Q96EK4 314 aa18.07■□□□□ 0.48
SF3A1-202ENST00000411423 SARGQ9BW04 601 aa18.07■□□□□ 0.48
SF3A1-202ENST00000411423 TRIM54Q9BYV2 358 aa18.07■□□□□ 0.48
SF3A1-202ENST00000411423 ATP13A2Q9NQ11 1180 aa18.07■□□□□ 0.48
SF3A1-202ENST00000411423 CTNNAL1Q9UBT7 734 aa18.07■□□□□ 0.48
SF3A1-202ENST00000411423 CDC14AQ9UNH5 594 aa18.07■□□□□ 0.48
SF3A1-202ENST00000411423 SLC22A14Q9Y267 594 aa18.07■□□□□ 0.48
SF3A1-202ENST00000411423 MAP4K5Q9Y4K4 846 aa18.07■□□□□ 0.48
SF3A1-202ENST00000411423 CSAG2Q9Y5P2 127 aa18.07■□□□□ 0.48
SF3A1-202ENST00000411423 MYO18BQ8IUG5 2567 aa18.06■□□□□ 0.48
SF3A1-202ENST00000411423 OR2W5A6NFC9 320 aa18.06■□□□□ 0.48
SF3A1-202ENST00000411423 IDSB3KWA1 339 aa18.06■□□□□ 0.48
SF3A1-202ENST00000411423 SGK494L7N484 410 aa18.06■□□□□ 0.48
SF3A1-202ENST00000411423 TXNDC9O14530 226 aa18.06■□□□□ 0.48
SF3A1-202ENST00000411423 GSTA2P09210 222 aa18.06■□□□□ 0.48
SF3A1-202ENST00000411423 COX6A1P12074 109 aa18.06■□□□□ 0.48
SF3A1-202ENST00000411423 CD1DP15813 335 aa18.06■□□□□ 0.48
SF3A1-202ENST00000411423 CDKL1Q00532 357 aa18.06■□□□□ 0.48
SF3A1-202ENST00000411423 CKAP4Q07065 602 aaKnown RBP18.06■□□□□ 0.48
SF3A1-202ENST00000411423 AIMP2Q13155 320 aaKnown RBP18.06■□□□□ 0.48
SF3A1-202ENST00000411423 USP10Q14694 798 aaKnown RBP18.06■□□□□ 0.48
SF3A1-202ENST00000411423 OR4D1Q15615 310 aa18.06■□□□□ 0.48
SF3A1-202ENST00000411423 ZKSCAN8Q15776 578 aaPredicted RBP18.06■□□□□ 0.48
SF3A1-202ENST00000411423 TUBB8Q3ZCM7 444 aa18.06■□□□□ 0.48
SF3A1-202ENST00000411423 FBXO48Q5FWF7 155 aa18.06■□□□□ 0.48
SF3A1-202ENST00000411423 C8orf74Q6P047 294 aa18.06■□□□□ 0.48
SF3A1-202ENST00000411423 PPM1NQ8N819 430 aa18.06■□□□□ 0.48
SF3A1-202ENST00000411423 ANKRD53Q8N9V6 530 aa18.06■□□□□ 0.48
SF3A1-202ENST00000411423 SLC13A3Q8WWT9 602 aa18.06■□□□□ 0.48
SF3A1-202ENST00000411423 SLC5A11Q8WWX8 675 aa18.06■□□□□ 0.48
SF3A1-202ENST00000411423 ATL1Q8WXF7 558 aa18.06■□□□□ 0.48
SF3A1-202ENST00000411423 CDKL2Q92772 493 aa18.06■□□□□ 0.48
SF3A1-202ENST00000411423 RHBDF1Q96CC6 855 aa18.06■□□□□ 0.48
SF3A1-202ENST00000411423 TMEM79Q9BSE2 394 aa18.06■□□□□ 0.48
SF3A1-202ENST00000411423 TGIF2Q9GZN2 237 aa18.06■□□□□ 0.48
SF3A1-202ENST00000411423 DERL2Q9GZP9 239 aa18.06■□□□□ 0.48
SF3A1-202ENST00000411423 AICDAQ9GZX7 198 aa18.06■□□□□ 0.48
SF3A1-202ENST00000411423 ZNF160Q9HCG1 818 aa18.06■□□□□ 0.48
SF3A1-202ENST00000411423 HCN3Q9P1Z3 774 aa18.06■□□□□ 0.48
SF3A1-202ENST00000411423 DMGDHQ9UI17 866 aaKnown RBP18.06■□□□□ 0.48
SF3A1-202ENST00000411423 TRBC2A0A5B9 178 aa18.05■□□□□ 0.48
SF3A1-202ENST00000411423 TAPBPO15533 448 aa18.05■□□□□ 0.48
SF3A1-202ENST00000411423 OR1F1O43749 312 aa18.05■□□□□ 0.48
SF3A1-202ENST00000411423 BMP10O95393 424 aa18.05■□□□□ 0.48
SF3A1-202ENST00000411423 NSA2O95478 260 aaKnown RBP18.05■□□□□ 0.48
SF3A1-202ENST00000411423 IGHEP01854 428 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms