RNA–Protein interactions for RNA: ENST00000410457.1

RNU2-28P-201, Transcript of RNA, U2 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU2-28P, Length 189 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-28P-201ENST00000410457 CCL24O00175 119 aa3.66□□□□□ -1.82
RNU2-28P-201ENST00000410457 BUB3O43684 328 aa3.66□□□□□ -1.82
RNU2-28P-201ENST00000410457 SEC22BO75396 215 aa3.66□□□□□ -1.82
RNU2-28P-201ENST00000410457 BCAS2O75934 225 aaPredicted RBP3.66□□□□□ -1.82
RNU2-28P-201ENST00000410457 CDK2AP2O75956 126 aa3.66□□□□□ -1.82
RNU2-28P-201ENST00000410457 KRT36O76013 467 aa3.66□□□□□ -1.82
RNU2-28P-201ENST00000410457 RAF1P04049 648 aa3.66□□□□□ -1.82
RNU2-28P-201ENST00000410457 F7P08709 466 aaPredicted RBP3.66□□□□□ -1.82
RNU2-28P-201ENST00000410457 SBK2P0C263 348 aa3.66□□□□□ -1.82
RNU2-28P-201ENST00000410457 DLATP10515 647 aaKnown RBP3.66□□□□□ -1.82
RNU2-28P-201ENST00000410457 DARSP14868 501 aaKnown RBP3.66□□□□□ -1.82
RNU2-28P-201ENST00000410457 IL10P22301 178 aa3.66□□□□□ -1.82
RNU2-28P-201ENST00000410457 LHCGRP22888 699 aa3.66□□□□□ -1.82
RNU2-28P-201ENST00000410457 ITGA3P26006 1051 aa3.66□□□□□ -1.82
RNU2-28P-201ENST00000410457 DUTP33316 252 aaKnown RBP3.66□□□□□ -1.82
RNU2-28P-201ENST00000410457 CLK1P49759 484 aaKnown RBP3.66□□□□□ -1.82
RNU2-28P-201ENST00000410457 BPIFB3P59826 476 aa3.66□□□□□ -1.82
RNU2-28P-201ENST00000410457 RPP38P78345 283 aaKnown RBP3.66□□□□□ -1.82
RNU2-28P-201ENST00000410457 MYL7Q01449 175 aa3.66□□□□□ -1.82
RNU2-28P-201ENST00000410457 GCNT1Q02742 428 aa3.66□□□□□ -1.82
RNU2-28P-201ENST00000410457 P2RY6Q15077 328 aa3.66□□□□□ -1.82
RNU2-28P-201ENST00000410457 ZRSR1Q15695 479 aaKnown RBP3.66□□□□□ -1.82
RNU2-28P-201ENST00000410457 MAPK11Q15759 364 aa3.66□□□□□ -1.82
RNU2-28P-201ENST00000410457 ACKR1Q16570 336 aa3.66□□□□□ -1.82
RNU2-28P-201ENST00000410457 ZNF585BQ52M93 769 aa3.66□□□□□ -1.82
RNU2-28P-201ENST00000410457 GDPD4Q6W3E5 623 aa3.66□□□□□ -1.82
RNU2-28P-201ENST00000410457 ZNF771Q7L3S4 317 aaPredicted RBP3.66□□□□□ -1.82
RNU2-28P-201ENST00000410457 ZNF410Q86VK4 478 aa3.66□□□□□ -1.82
RNU2-28P-201ENST00000410457 CROCCP3Q8IVE0 287 aa3.66□□□□□ -1.82
RNU2-28P-201ENST00000410457 MARVELD2Q8N4S9 558 aa3.66□□□□□ -1.82
RNU2-28P-201ENST00000410457 TMEM99Q8N816 258 aa3.66□□□□□ -1.82
RNU2-28P-201ENST00000410457 LMNTD1Q8N9Z9 388 aa3.66□□□□□ -1.82
RNU2-28P-201ENST00000410457 RNASE8Q8TDE3 154 aaKnown RBP3.66□□□□□ -1.82
RNU2-28P-201ENST00000410457 FCAMRQ8WWV6 532 aa3.66□□□□□ -1.82
RNU2-28P-201ENST00000410457 METTL21AQ8WXB1 218 aa3.66□□□□□ -1.82
RNU2-28P-201ENST00000410457 TM9SF4Q92544 642 aa3.66□□□□□ -1.82
RNU2-28P-201ENST00000410457 ALG14Q96F25 216 aa3.66□□□□□ -1.82
RNU2-28P-201ENST00000410457 RBM41Q96IZ5 413 aaKnown RBP3.66□□□□□ -1.82
RNU2-28P-201ENST00000410457 ZNF354BQ96LW1 612 aa3.66□□□□□ -1.82
RNU2-28P-201ENST00000410457 ALKBH7Q9BT30 221 aaPredicted RBP3.66□□□□□ -1.82
RNU2-28P-201ENST00000410457 ACPTQ9BZG2 426 aa3.66□□□□□ -1.82
RNU2-28P-201ENST00000410457 NACAP1Q9BZK3 213 aa3.66□□□□□ -1.82
RNU2-28P-201ENST00000410457 BICC1Q9H694 974 aaKnown RBP3.66□□□□□ -1.82
RNU2-28P-201ENST00000410457 ZNF556Q9HAH1 456 aa3.66□□□□□ -1.82
RNU2-28P-201ENST00000410457 RAB9BQ9NP90 201 aa3.66□□□□□ -1.82
RNU2-28P-201ENST00000410457 EXOC1Q9NV70 894 aa3.66□□□□□ -1.82
RNU2-28P-201ENST00000410457 C19orf25Q9UFG5 118 aaPredicted RBP3.66□□□□□ -1.82
RNU2-28P-201ENST00000410457 IL36AQ9UHA7 158 aa3.66□□□□□ -1.82
RNU2-28P-201ENST00000410457 SLC12A6Q9UHW9 1150 aa3.66□□□□□ -1.82
RNU2-28P-201ENST00000410457 TNNQ9UQP3 1299 aa3.66□□□□□ -1.82
RNU2-28P-201ENST00000410457 FOXA2Q9Y261 457 aaPredicted RBP3.66□□□□□ -1.82
RNU2-28P-201ENST00000410457 TEX264Q9Y6I9 313 aa3.66□□□□□ -1.82
RNU2-28P-201ENST00000410457 R4GN57 208 aa3.66□□□□□ -1.82
RNU2-28P-201ENST00000410457 TRBV2A0A0J9YWF9 115 aa3.65□□□□□ -1.83
RNU2-28P-201ENST00000410457 MAGEB16A2A368 324 aa3.65□□□□□ -1.83
RNU2-28P-201ENST00000410457 FAM172BPA6NC97 362 aa3.65□□□□□ -1.83
RNU2-28P-201ENST00000410457 RTCAO00442 366 aaKnown RBP3.65□□□□□ -1.83
RNU2-28P-201ENST00000410457 FGF17O60258 216 aa3.65□□□□□ -1.83
RNU2-28P-201ENST00000410457 PRDM1O75626 825 aa3.65□□□□□ -1.83
RNU2-28P-201ENST00000410457 CRYAAP02489 173 aa3.65□□□□□ -1.83
RNU2-28P-201ENST00000410457 ATP1B1P05026 303 aa3.65□□□□□ -1.83
RNU2-28P-201ENST00000410457 EDN1P05305 212 aa3.65□□□□□ -1.83
RNU2-28P-201ENST00000410457 ABHD2P08910 425 aa3.65□□□□□ -1.83
RNU2-28P-201ENST00000410457 CEACAM8P31997 349 aaPredicted RBP3.65□□□□□ -1.83
RNU2-28P-201ENST00000410457 SLC12A3P55017 1021 aa3.65□□□□□ -1.83
RNU2-28P-201ENST00000410457 SLC3A1Q07837 685 aa3.65□□□□□ -1.83
RNU2-28P-201ENST00000410457 SMC1AQ14683 1233 aaKnown RBP3.65□□□□□ -1.83
RNU2-28P-201ENST00000410457 PPA1Q15181 289 aa3.65□□□□□ -1.83
RNU2-28P-201ENST00000410457 SLC25A53Q5H9E4 307 aa3.65□□□□□ -1.83
RNU2-28P-201ENST00000410457 ARMCX4Q5H9R4 360 aa3.65□□□□□ -1.83
RNU2-28P-201ENST00000410457 LCN1P1Q5VSP4 162 aa3.65□□□□□ -1.83
RNU2-28P-201ENST00000410457 C19orf48Q6RUI8 117 aa3.65□□□□□ -1.83
RNU2-28P-201ENST00000410457 RBMS3Q6XE24 437 aaKnown RBP3.65□□□□□ -1.83
RNU2-28P-201ENST00000410457 ASPGQ86U10 573 aa3.65□□□□□ -1.83
RNU2-28P-201ENST00000410457 PIGZQ86VD9 579 aa3.65□□□□□ -1.83
RNU2-28P-201ENST00000410457 KIRREL3Q8IZU9 778 aa3.65□□□□□ -1.83
RNU2-28P-201ENST00000410457 CIARTQ8N365 385 aaPredicted RBP3.65□□□□□ -1.83
RNU2-28P-201ENST00000410457 LRTM2Q8N967 370 aa3.65□□□□□ -1.83
RNU2-28P-201ENST00000410457 OR7A2PQ8NGA2 310 aa3.65□□□□□ -1.83
RNU2-28P-201ENST00000410457 SAP25Q8TEE9 199 aa3.65□□□□□ -1.83
RNU2-28P-201ENST00000410457 TMEM143Q96AN5 459 aa3.65□□□□□ -1.83
RNU2-28P-201ENST00000410457 LMLNQ96KR4 655 aa3.65□□□□□ -1.83
RNU2-28P-201ENST00000410457 TMEM237Q96Q45 408 aa3.65□□□□□ -1.83
RNU2-28P-201ENST00000410457 SLC39A8Q9C0K1 460 aa3.65□□□□□ -1.83
RNU2-28P-201ENST00000410457 FAM49AQ9H0Q0 323 aaPredicted RBP3.65□□□□□ -1.83
RNU2-28P-201ENST00000410457 ZDHHC6Q9H6R6 413 aa3.65□□□□□ -1.83
RNU2-28P-201ENST00000410457 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.65□□□□□ -1.83
RNU2-28P-201ENST00000410457 TRMT6Q9UJA5 497 aaKnown RBP3.65□□□□□ -1.83
RNU2-28P-201ENST00000410457 TDRKHQ9Y2W6 561 aaKnown RBP3.65□□□□□ -1.83
RNU2-28P-201ENST00000410457 SCN5AQ14524 2016 aa3.65□□□□□ -1.83
RNU2-28P-201ENST00000410457 TMEM129A0AVI4 362 aa3.64□□□□□ -1.83
RNU2-28P-201ENST00000410457 ANTXRLA6NF34 631 aa3.64□□□□□ -1.83
RNU2-28P-201ENST00000410457 KLF11O14901 512 aa3.64□□□□□ -1.83
RNU2-28P-201ENST00000410457 EPHB6O15197 1021 aa3.64□□□□□ -1.83
RNU2-28P-201ENST00000410457 ACSL4O60488 711 aa3.64□□□□□ -1.83
RNU2-28P-201ENST00000410457 LETM1O95202 739 aaPredicted RBP3.64□□□□□ -1.83
RNU2-28P-201ENST00000410457 CLPTM1O96005 669 aa3.64□□□□□ -1.83
RNU2-28P-201ENST00000410457 RBMS1P29558 406 aaKnown RBP3.64□□□□□ -1.83
RNU2-28P-201ENST00000410457 ALDH1B1P30837 517 aa3.64□□□□□ -1.83
RNU2-28P-201ENST00000410457 DNA2P51530 1060 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms