RNA–Protein interactions for RNA: ENST00000410062.8

UBE2E3-202, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2E3, Length 1,570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-202ENST00000410062 ACMSDQ8TDX5 336 aa22.74■■□□□ 1.23
UBE2E3-202ENST00000410062 THAP11Q96EK4 314 aa22.74■■□□□ 1.23
UBE2E3-202ENST00000410062 SLC45A3Q96JT2 553 aa22.74■■□□□ 1.23
UBE2E3-202ENST00000410062 GPRC5BQ9NZH0 403 aa22.74■■□□□ 1.23
UBE2E3-202ENST00000410062 KCND3Q9UK17 655 aa22.74■■□□□ 1.23
UBE2E3-202ENST00000410062 TRBC2A0A5B9 178 aa22.73■■□□□ 1.23
UBE2E3-202ENST00000410062 LRRC14BA6NHZ5 514 aa22.73■■□□□ 1.23
UBE2E3-202ENST00000410062 KLK8O60259 260 aa22.73■■□□□ 1.23
UBE2E3-202ENST00000410062 CDH16O75309 829 aa22.73■■□□□ 1.23
UBE2E3-202ENST00000410062 CAPN1P07384 714 aa22.73■■□□□ 1.23
UBE2E3-202ENST00000410062 C1GALT1C1LP0DN25 315 aa22.73■■□□□ 1.23
UBE2E3-202ENST00000410062 KRT15P19012 456 aa22.73■■□□□ 1.23
UBE2E3-202ENST00000410062 ITGAXP20702 1163 aa22.73■■□□□ 1.23
UBE2E3-202ENST00000410062 ALDH18A1P54886 795 aaKnown RBP22.73■■□□□ 1.23
UBE2E3-202ENST00000410062 RPS18P62269 152 aaKnown RBP22.73■■□□□ 1.23
UBE2E3-202ENST00000410062 CYP4F2P78329 520 aa22.73■■□□□ 1.23
UBE2E3-202ENST00000410062 NFKB2Q00653 900 aa22.73■■□□□ 1.23
UBE2E3-202ENST00000410062 REEP5Q00765 189 aa22.73■■□□□ 1.23
UBE2E3-202ENST00000410062 IFFO1Q0D2I5 559 aa22.73■■□□□ 1.23
UBE2E3-202ENST00000410062 RASA2Q15283 850 aa22.73■■□□□ 1.23
UBE2E3-202ENST00000410062 CNPY4Q8N129 248 aa22.73■■□□□ 1.23
UBE2E3-202ENST00000410062 ZSCAN1Q8NBB4 408 aa22.73■■□□□ 1.23
UBE2E3-202ENST00000410062 ZDHHC19Q8WVZ1 309 aaPredicted RBP22.73■■□□□ 1.23
UBE2E3-202ENST00000410062 STARD8Q92502 1023 aa22.73■■□□□ 1.23
UBE2E3-202ENST00000410062 MRPL57Q9BQC6 102 aaKnown RBP22.73■■□□□ 1.23
UBE2E3-202ENST00000410062 AIF1LQ9BQI0 150 aa22.73■■□□□ 1.23
UBE2E3-202ENST00000410062 SARGQ9BW04 601 aa22.73■■□□□ 1.23
UBE2E3-202ENST00000410062 CAPS2Q9BXY5 557 aa22.73■■□□□ 1.23
UBE2E3-202ENST00000410062 TMEM216Q9P0N5 145 aa22.73■■□□□ 1.23
UBE2E3-202ENST00000410062 OPTCQ9UBM4 332 aa22.73■■□□□ 1.23
UBE2E3-202ENST00000410062 K7EPI3 171 aa22.72■■□□□ 1.23
UBE2E3-202ENST00000410062 TXNDC9O14530 226 aa22.72■■□□□ 1.23
UBE2E3-202ENST00000410062 CLGNO14967 610 aa22.72■■□□□ 1.23
UBE2E3-202ENST00000410062 PRAMEF4O60810 478 aa22.72■■□□□ 1.23
UBE2E3-202ENST00000410062 EPORP19235 508 aa22.72■■□□□ 1.23
UBE2E3-202ENST00000410062 RPS15P62841 145 aaKnown RBP22.72■■□□□ 1.23
UBE2E3-202ENST00000410062 MUM1Q2TAK8 710 aa22.72■■□□□ 1.23
UBE2E3-202ENST00000410062 NKAIN1Q4KMZ8 207 aa22.72■■□□□ 1.23
UBE2E3-202ENST00000410062 PRAMEF9Q5VWM5 478 aa22.72■■□□□ 1.23
UBE2E3-202ENST00000410062 MLIPQ5VWP3 458 aa22.72■■□□□ 1.23
UBE2E3-202ENST00000410062 ATG9BQ674R7 924 aa22.72■■□□□ 1.23
UBE2E3-202ENST00000410062 C16orf46Q6P387 395 aa22.72■■□□□ 1.23
UBE2E3-202ENST00000410062 ASPGQ86U10 573 aa22.72■■□□□ 1.23
UBE2E3-202ENST00000410062 TMEM151AQ8N4L1 468 aa22.72■■□□□ 1.23
UBE2E3-202ENST00000410062 ENDOVQ8N8Q3 282 aaKnown RBP22.72■■□□□ 1.23
UBE2E3-202ENST00000410062 TM4SF19Q96DZ7 209 aa22.72■■□□□ 1.23
UBE2E3-202ENST00000410062 PHF21BQ96EK2 531 aa22.72■■□□□ 1.23
UBE2E3-202ENST00000410062 GPR87Q9BY21 358 aa22.72■■□□□ 1.23
UBE2E3-202ENST00000410062 MRPL46Q9H2W6 279 aaKnown RBP22.72■■□□□ 1.23
UBE2E3-202ENST00000410062 ACTL8Q9H568 366 aa22.72■■□□□ 1.23
UBE2E3-202ENST00000410062 RRAGDQ9NQL2 400 aaPredicted RBP22.72■■□□□ 1.23
UBE2E3-202ENST00000410062 GEMIN8Q9NWZ8 242 aaKnown RBP22.72■■□□□ 1.23
UBE2E3-202ENST00000410062 IFT80Q9P2H3 777 aaPredicted RBP22.72■■□□□ 1.23
UBE2E3-202ENST00000410062 FARSAQ9Y285 508 aaKnown RBP22.72■■□□□ 1.23
UBE2E3-202ENST00000410062 PCDHGA6Q9Y5G7 932 aa22.72■■□□□ 1.23
UBE2E3-202ENST00000410062 MAU2Q9Y6X3 613 aa22.72■■□□□ 1.23
UBE2E3-202ENST00000410062 NKX2-8O15522 239 aa22.72■■□□□ 1.23
UBE2E3-202ENST00000410062 SIX3O95343 332 aaPredicted RBP22.72■■□□□ 1.23
UBE2E3-202ENST00000410062 SBK3P0C264 359 aa22.72■■□□□ 1.23
UBE2E3-202ENST00000410062 PTPN4P29074 926 aa22.72■■□□□ 1.23
UBE2E3-202ENST00000410062 OR1D4P47884 311 aa22.72■■□□□ 1.23
UBE2E3-202ENST00000410062 SNRPNP63162 240 aaKnown RBP22.72■■□□□ 1.23
UBE2E3-202ENST00000410062 RBBP5Q15291 538 aaKnown RBP22.72■■□□□ 1.23
UBE2E3-202ENST00000410062 FAM69BQ5VUD6 431 aa22.72■■□□□ 1.23
UBE2E3-202ENST00000410062 ARHGEF39Q8N4T4 335 aa22.72■■□□□ 1.23
UBE2E3-202ENST00000410062 TBC1D19Q8N5T2 526 aa22.72■■□□□ 1.23
UBE2E3-202ENST00000410062 PTGR2Q8N8N7 351 aaPredicted RBP22.72■■□□□ 1.23
UBE2E3-202ENST00000410062 SLC13A3Q8WWT9 602 aa22.72■■□□□ 1.23
UBE2E3-202ENST00000410062 NLNQ9BYT8 704 aa22.72■■□□□ 1.23
UBE2E3-202ENST00000410062 SLC22A11Q9NSA0 550 aa22.72■■□□□ 1.23
UBE2E3-202ENST00000410062 PLAAQ9Y263 795 aa22.72■■□□□ 1.23
UBE2E3-202ENST00000410062 C9J4A7 227 aa22.71■■□□□ 1.23
UBE2E3-202ENST00000410062 H2AFYO75367 372 aaKnown RBP22.71■■□□□ 1.23
UBE2E3-202ENST00000410062 RAB40ALP0C0E4 278 aa22.71■■□□□ 1.23
UBE2E3-202ENST00000410062 SCTRP47872 440 aa22.71■■□□□ 1.23
UBE2E3-202ENST00000410062 EMP3P54852 163 aa22.71■■□□□ 1.23
UBE2E3-202ENST00000410062 SLBPQ14493 270 aaKnown RBP eCLIP22.71■■□□□ 1.23
UBE2E3-202ENST00000410062 NCF4Q15080 339 aa22.71■■□□□ 1.23
UBE2E3-202ENST00000410062 XKR6Q5GH73 641 aa22.71■■□□□ 1.23
UBE2E3-202ENST00000410062 SH2D5Q6ZV89 423 aa22.71■■□□□ 1.23
UBE2E3-202ENST00000410062 GPR155Q7Z3F1 870 aa22.71■■□□□ 1.23
UBE2E3-202ENST00000410062 TEX9Q8N6V9 391 aa22.71■■□□□ 1.23
UBE2E3-202ENST00000410062 ANKRD53Q8N9V6 530 aa22.71■■□□□ 1.23
UBE2E3-202ENST00000410062 CAMKVQ8NCB2 501 aa22.71■■□□□ 1.23
UBE2E3-202ENST00000410062 SNRNP27Q8WVK2 155 aaKnown RBP22.71■■□□□ 1.23
UBE2E3-202ENST00000410062 MOCOSQ96EN8 888 aa22.71■■□□□ 1.23
UBE2E3-202ENST00000410062 MRPS2Q9Y399 296 aaKnown RBP22.71■■□□□ 1.23
UBE2E3-202ENST00000410062 ZNF891A8MT65 544 aaPredicted RBP22.7■■□□□ 1.22
UBE2E3-202ENST00000410062 SMIM24O75264 130 aa22.7■■□□□ 1.22
UBE2E3-202ENST00000410062 SERPIND1P05546 499 aa22.7■■□□□ 1.22
UBE2E3-202ENST00000410062 PRKAR1AP10644 381 aa22.7■■□□□ 1.22
UBE2E3-202ENST00000410062 ATP1A1-AS1Q5TC04 95 aa22.7■■□□□ 1.22
UBE2E3-202ENST00000410062 LCA5Q86VQ0 697 aa22.7■■□□□ 1.22
UBE2E3-202ENST00000410062 KCT2Q8NC54 265 aa22.7■■□□□ 1.22
UBE2E3-202ENST00000410062 GPN3Q9UHW5 284 aaPredicted RBP22.7■■□□□ 1.22
UBE2E3-202ENST00000410062 ZFP69BQ9UJL9 534 aa22.7■■□□□ 1.22
UBE2E3-202ENST00000410062 LHX6Q9UPM6 363 aa22.7■■□□□ 1.22
UBE2E3-202ENST00000410062 NDUFS4O43181 175 aa22.69■■□□□ 1.22
UBE2E3-202ENST00000410062 CREG1O75629 220 aa22.69■■□□□ 1.22
UBE2E3-202ENST00000410062 SLC35G6P0C7Q6 338 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 144.6 ms