RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 HAUS8Q9BT25 410 aa16.81■□□□□ 0.28
LSM5-204ENST00000409909 YIPF2Q9BWQ6 316 aa16.81■□□□□ 0.28
LSM5-204ENST00000409909 TRIM54Q9BYV2 358 aa16.81■□□□□ 0.28
LSM5-204ENST00000409909 NSMCE4AQ9NXX6 385 aa16.81■□□□□ 0.28
LSM5-204ENST00000409909 NOVA2Q9UNW9 492 aaKnown RBP16.81■□□□□ 0.28
LSM5-204ENST00000409909 MTO1Q9Y2Z2 717 aaKnown RBP16.81■□□□□ 0.28
LSM5-204ENST00000409909 USP9XQ93008 2570 aaPredicted RBP16.81■□□□□ 0.28
LSM5-204ENST00000409909 CNTRLQ7Z7A1 2325 aa16.8■□□□□ 0.28
LSM5-204ENST00000409909 TCRBV9S1A1TA0A576 114 aa16.8■□□□□ 0.28
LSM5-204ENST00000409909 NPEPPSL1A6NEC2 478 aa16.8■□□□□ 0.28
LSM5-204ENST00000409909 ITGA3P26006 1051 aa16.8■□□□□ 0.28
LSM5-204ENST00000409909 EFNA3P52797 238 aa16.8■□□□□ 0.28
LSM5-204ENST00000409909 MAT1AQ00266 395 aaKnown RBP16.8■□□□□ 0.28
LSM5-204ENST00000409909 MEF2AQ02078 507 aaPredicted RBP16.8■□□□□ 0.28
LSM5-204ENST00000409909 TUBB8Q3ZCM7 444 aa16.8■□□□□ 0.28
LSM5-204ENST00000409909 ZDHHC24Q6UX98 284 aa16.8■□□□□ 0.28
LSM5-204ENST00000409909 IGFL3Q6UXB1 125 aa16.8■□□□□ 0.28
LSM5-204ENST00000409909 CYS1Q717R9 158 aa16.8■□□□□ 0.28
LSM5-204ENST00000409909 PARP9Q8IXQ6 854 aa16.8■□□□□ 0.28
LSM5-204ENST00000409909 KCT2Q8NC54 265 aa16.8■□□□□ 0.28
LSM5-204ENST00000409909 FBXO25Q8TCJ0 367 aa16.8■□□□□ 0.28
LSM5-204ENST00000409909 ANKRD7Q92527 254 aa16.8■□□□□ 0.28
LSM5-204ENST00000409909 TGIF2Q9GZN2 237 aa16.8■□□□□ 0.28
LSM5-204ENST00000409909 CAB39LQ9H9S4 337 aa16.8■□□□□ 0.28
LSM5-204ENST00000409909 MKKSQ9NPJ1 570 aaPredicted RBP16.8■□□□□ 0.28
LSM5-204ENST00000409909 UTP11Q9Y3A2 253 aaKnown RBP16.8■□□□□ 0.28
LSM5-204ENST00000409909 MAP4K5Q9Y4K4 846 aa16.8■□□□□ 0.28
LSM5-204ENST00000409909 PTPN13Q12923 2485 aa16.8■□□□□ 0.28
LSM5-204ENST00000409909 SCN3AQ9NY46 2000 aa16.8■□□□□ 0.28
LSM5-204ENST00000409909 PABPN1LA6NDY0 278 aaKnown RBP16.79■□□□□ 0.28
LSM5-204ENST00000409909 IDSB3KWA1 339 aa16.79■□□□□ 0.28
LSM5-204ENST00000409909 PRPF4O43172 522 aaKnown RBP eCLIP16.79■□□□□ 0.28
LSM5-204ENST00000409909 WISP3O95389 354 aaPredicted RBP16.79■□□□□ 0.28
LSM5-204ENST00000409909 ANXA5P08758 320 aa16.79■□□□□ 0.28
LSM5-204ENST00000409909 CCR8P51685 355 aa16.79■□□□□ 0.28
LSM5-204ENST00000409909 EMP2P54851 167 aa16.79■□□□□ 0.28
LSM5-204ENST00000409909 NDUFA9Q16795 377 aa16.79■□□□□ 0.28
LSM5-204ENST00000409909 PLEKHN1Q494U1 663 aaPredicted RBP16.79■□□□□ 0.28
LSM5-204ENST00000409909 PRR30Q53SZ7 412 aaPredicted RBP16.79■□□□□ 0.28
LSM5-204ENST00000409909 CATSPEREQ5SY80 951 aa16.79■□□□□ 0.28
LSM5-204ENST00000409909 TMEM214Q6NUQ4 689 aaKnown RBP16.79■□□□□ 0.28
LSM5-204ENST00000409909 C3orf62Q6ZUJ4 267 aa16.79■□□□□ 0.28
LSM5-204ENST00000409909 ZC3H7AQ8IWR0 971 aaKnown RBP16.79■□□□□ 0.28
LSM5-204ENST00000409909 MFSD9Q8NBP5 474 aa16.79■□□□□ 0.28
LSM5-204ENST00000409909 ZNF740Q8NDX6 193 aa16.79■□□□□ 0.28
LSM5-204ENST00000409909 CPT1CQ8TCG5 803 aa16.79■□□□□ 0.28
LSM5-204ENST00000409909 ATL1Q8WXF7 558 aa16.79■□□□□ 0.28
LSM5-204ENST00000409909 NEIL2Q969S2 332 aa16.79■□□□□ 0.28
LSM5-204ENST00000409909 PNPLA2Q96AD5 504 aa16.79■□□□□ 0.28
LSM5-204ENST00000409909 POPDC3Q9HBV1 291 aa16.79■□□□□ 0.28
LSM5-204ENST00000409909 SHANK1Q9Y566 2161 aa16.79■□□□□ 0.28
LSM5-204ENST00000409909 UTP20O75691 2785 aaKnown RBP16.78■□□□□ 0.28
LSM5-204ENST00000409909 FAM159BA6NKW6 160 aa16.78■□□□□ 0.28
LSM5-204ENST00000409909 ALPPP05187 535 aa16.78■□□□□ 0.28
LSM5-204ENST00000409909 ACPPP15309 386 aa16.78■□□□□ 0.28
LSM5-204ENST00000409909 AVPR1BP47901 424 aa16.78■□□□□ 0.28
LSM5-204ENST00000409909 POU4F1Q01851 419 aa16.78■□□□□ 0.28
LSM5-204ENST00000409909 TSNQ15631 228 aaKnown RBP16.78■□□□□ 0.28
LSM5-204ENST00000409909 FAAH2Q6GMR7 532 aa16.78■□□□□ 0.28
LSM5-204ENST00000409909 ASPGQ86U10 573 aa16.78■□□□□ 0.28
LSM5-204ENST00000409909 PDSS2Q86YH6 399 aa16.78■□□□□ 0.28
LSM5-204ENST00000409909 CAMKVQ8NCB2 501 aa16.78■□□□□ 0.28
LSM5-204ENST00000409909 SLC13A3Q8WWT9 602 aa16.78■□□□□ 0.28
LSM5-204ENST00000409909 MOCOSQ96EN8 888 aa16.78■□□□□ 0.28
LSM5-204ENST00000409909 TSNARE1Q96NA8 513 aa16.78■□□□□ 0.28
LSM5-204ENST00000409909 SARGQ9BW04 601 aa16.78■□□□□ 0.28
LSM5-204ENST00000409909 UNKQ9C0B0 810 aaKnown RBP16.78■□□□□ 0.28
LSM5-204ENST00000409909 RAB17Q9H0T7 212 aa16.78■□□□□ 0.28
LSM5-204ENST00000409909 SPNS1Q9H2V7 528 aa16.78■□□□□ 0.28
LSM5-204ENST00000409909 ZNF160Q9HCG1 818 aa16.78■□□□□ 0.28
LSM5-204ENST00000409909 GPAMQ9HCL2 828 aa16.78■□□□□ 0.28
LSM5-204ENST00000409909 C14orf105Q9NVL8 296 aa16.78■□□□□ 0.28
LSM5-204ENST00000409909 H0YIG0 161 aa16.77■□□□□ 0.28
LSM5-204ENST00000409909 SGK494L7N484 410 aa16.77■□□□□ 0.28
LSM5-204ENST00000409909 OR1F1O43749 312 aa16.77■□□□□ 0.28
LSM5-204ENST00000409909 KLHL41O60662 606 aa16.77■□□□□ 0.28
LSM5-204ENST00000409909 JRKO75564 520 aa16.77■□□□□ 0.28
LSM5-204ENST00000409909 BMP10O95393 424 aa16.77■□□□□ 0.28
LSM5-204ENST00000409909 NSA2O95478 260 aaKnown RBP16.77■□□□□ 0.28
LSM5-204ENST00000409909 HPP00738 406 aa16.77■□□□□ 0.28
LSM5-204ENST00000409909 HEXBP07686 556 aa16.77■□□□□ 0.28
LSM5-204ENST00000409909 GSTA2P09210 222 aa16.77■□□□□ 0.28
LSM5-204ENST00000409909 COX6A1P12074 109 aa16.77■□□□□ 0.28
LSM5-204ENST00000409909 IL1RNP18510 177 aa16.77■□□□□ 0.28
LSM5-204ENST00000409909 GRK3P35626 688 aa16.77■□□□□ 0.28
LSM5-204ENST00000409909 MAGEA4P43358 317 aa16.77■□□□□ 0.28
LSM5-204ENST00000409909 SLC7A5Q01650 507 aa16.77■□□□□ 0.28
LSM5-204ENST00000409909 CAV1Q03135 178 aa16.77■□□□□ 0.28
LSM5-204ENST00000409909 INPP5JQ15735 1006 aaPredicted RBP16.77■□□□□ 0.28
LSM5-204ENST00000409909 C18orf21Q32NC0 220 aaPredicted RBP16.77■□□□□ 0.28
LSM5-204ENST00000409909 THOC6Q86W42 341 aaKnown RBP16.77■□□□□ 0.28
LSM5-204ENST00000409909 CCDC25Q86WR0 208 aa16.77■□□□□ 0.28
LSM5-204ENST00000409909 SPATA6LQ8N4H0 392 aa16.77■□□□□ 0.28
LSM5-204ENST00000409909 AMER2Q8N7J2 671 aa16.77■□□□□ 0.28
LSM5-204ENST00000409909 ZCCHC10Q8TBK6 192 aa16.77■□□□□ 0.28
LSM5-204ENST00000409909 SLC5A11Q8WWX8 675 aa16.77■□□□□ 0.28
LSM5-204ENST00000409909 CDKL2Q92772 493 aa16.77■□□□□ 0.28
LSM5-204ENST00000409909 THOC3Q96J01 351 aaKnown RBP16.77■□□□□ 0.28
LSM5-204ENST00000409909 C16orf45Q96MC5 204 aaPredicted RBP16.77■□□□□ 0.28
LSM5-204ENST00000409909 RBBP8Q99708 897 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms