RNA–Protein interactions for RNA: ENST00000409894.7

POLR1B-203, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best) BASIC

Gene POLR1B, Length 4,457 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-203ENST00000409894 GSKIPQ9P0R6 139 aa8.88□□□□□ -0.99
POLR1B-203ENST00000409894 TPRP12270 2363 aaKnown RBP8.88□□□□□ -0.99
POLR1B-203ENST00000409894 TTC24A2A3L6 582 aaPredicted RBP8.88□□□□□ -0.99
POLR1B-203ENST00000409894 PRORSD1PA6NEY8 169 aa8.88□□□□□ -0.99
POLR1B-203ENST00000409894 ADM5C9JUS6 153 aa8.88□□□□□ -0.99
POLR1B-203ENST00000409894 PDHXO00330 501 aa8.88□□□□□ -0.99
POLR1B-203ENST00000409894 CXCL11O14625 94 aa8.88□□□□□ -0.99
POLR1B-203ENST00000409894 PROM1O43490 865 aa8.88□□□□□ -0.99
POLR1B-203ENST00000409894 BCAS1O75363 584 aaPredicted RBP8.88□□□□□ -0.99
POLR1B-203ENST00000409894 SORBS2O94875 1100 aaKnown RBP8.88□□□□□ -0.99
POLR1B-203ENST00000409894 RAB36O95755 333 aa8.88□□□□□ -0.99
POLR1B-203ENST00000409894 SCGB1D2O95969 90 aa8.88□□□□□ -0.99
POLR1B-203ENST00000409894 PTTG1O95997 202 aa8.88□□□□□ -0.99
POLR1B-203ENST00000409894 VIPP01282 170 aa8.88□□□□□ -0.99
POLR1B-203ENST00000409894 HLA-DQB2P05538 268 aa8.88□□□□□ -0.99
POLR1B-203ENST00000409894 BCHEP06276 602 aa8.88□□□□□ -0.99
POLR1B-203ENST00000409894 AKR1A1P14550 325 aa8.88□□□□□ -0.99
POLR1B-203ENST00000409894 GADD45AP24522 165 aa8.88□□□□□ -0.99
POLR1B-203ENST00000409894 CD52P31358 61 aa8.88□□□□□ -0.99
POLR1B-203ENST00000409894 GMPRP36959 345 aa8.88□□□□□ -0.99
POLR1B-203ENST00000409894 NSG1P42857 185 aa8.88□□□□□ -0.99
POLR1B-203ENST00000409894 GRK6P43250 576 aa8.88□□□□□ -0.99
POLR1B-203ENST00000409894 RGS19P49795 217 aa8.88□□□□□ -0.99
POLR1B-203ENST00000409894 E2F1Q01094 437 aa8.88□□□□□ -0.99
POLR1B-203ENST00000409894 AIMP2Q13155 320 aaKnown RBP8.88□□□□□ -0.99
POLR1B-203ENST00000409894 SNTB2Q13425 540 aaKnown RBP8.88□□□□□ -0.99
POLR1B-203ENST00000409894 PRAMEF19Q5SWL8 479 aa8.88□□□□□ -0.99
POLR1B-203ENST00000409894 FRG2Q64ET8 278 aa8.88□□□□□ -0.99
POLR1B-203ENST00000409894 TMEM199Q8N511 208 aa8.88□□□□□ -0.99
POLR1B-203ENST00000409894 FRG2BQ96QU4 278 aa8.88□□□□□ -0.99
POLR1B-203ENST00000409894 TWNKQ96RR1 684 aa8.88□□□□□ -0.99
POLR1B-203ENST00000409894 SLC29A1Q99808 456 aa8.88□□□□□ -0.99
POLR1B-203ENST00000409894 LHPPQ9H008 270 aa8.88□□□□□ -0.99
POLR1B-203ENST00000409894 GBA2Q9HCG7 927 aaPredicted RBP8.88□□□□□ -0.99
POLR1B-203ENST00000409894 POT1Q9NUX5 634 aa8.88□□□□□ -0.99
POLR1B-203ENST00000409894 CACNG4Q9UBN1 327 aa8.88□□□□□ -0.99
POLR1B-203ENST00000409894 CDH7Q9ULB5 785 aa8.88□□□□□ -0.99
POLR1B-203ENST00000409894 ERVK-19Q9WJR5 959 aa8.88□□□□□ -0.99
POLR1B-203ENST00000409894 PCDHGB6Q9Y5F9 930 aa8.88□□□□□ -0.99
POLR1B-203ENST00000409894 PCDHA2Q9Y5H9 948 aa8.88□□□□□ -0.99
POLR1B-203ENST00000409894 PPRC1Q5VV67 1664 aaKnown RBP8.88□□□□□ -0.99
POLR1B-203ENST00000409894 TRBV23OR9-2A0A075B6M9 112 aa8.88□□□□□ -0.99
POLR1B-203ENST00000409894 LOC730098B7Z3J9 87 aa8.88□□□□□ -0.99
POLR1B-203ENST00000409894 C9IYK1 514 aa8.88□□□□□ -0.99
POLR1B-203ENST00000409894 LRRN3E7EW58 273 aa8.88□□□□□ -0.99
POLR1B-203ENST00000409894 HAS3O00219 553 aa8.88□□□□□ -0.99
POLR1B-203ENST00000409894 PLSCR1O15162 318 aa8.88□□□□□ -0.99
POLR1B-203ENST00000409894 GATBO75879 557 aaKnown RBP8.88□□□□□ -0.99
POLR1B-203ENST00000409894 MATN4O95460 622 aa8.88□□□□□ -0.99
POLR1B-203ENST00000409894 SPARCP09486 303 aa8.88□□□□□ -0.99
POLR1B-203ENST00000409894 CORO1AP31146 461 aaKnown RBP8.88□□□□□ -0.99
POLR1B-203ENST00000409894 OR1D2P34982 312 aa8.88□□□□□ -0.99
POLR1B-203ENST00000409894 ARL2P36404 184 aa8.88□□□□□ -0.99
POLR1B-203ENST00000409894 APLP1P51693 650 aa8.88□□□□□ -0.99
POLR1B-203ENST00000409894 PGGT1BP53609 377 aa8.88□□□□□ -0.99
POLR1B-203ENST00000409894 GJA9P57773 515 aa8.88□□□□□ -0.99
POLR1B-203ENST00000409894 LILRA4P59901 499 aa8.88□□□□□ -0.99
POLR1B-203ENST00000409894 RFTN1Q14699 578 aaPredicted RBP8.88□□□□□ -0.99
POLR1B-203ENST00000409894 PTGR1Q14914 329 aa8.88□□□□□ -0.99
POLR1B-203ENST00000409894 SLC10A6Q3KNW5 377 aa8.88□□□□□ -0.99
POLR1B-203ENST00000409894 GXYLT1Q4G148 440 aa8.88□□□□□ -0.99
POLR1B-203ENST00000409894 CDKL4Q5MAI5 379 aa8.88□□□□□ -0.99
POLR1B-203ENST00000409894 C22orf42Q6IC83 251 aa8.88□□□□□ -0.99
POLR1B-203ENST00000409894 CATSPERGQ6ZRH7 1159 aa8.88□□□□□ -0.99
POLR1B-203ENST00000409894 NXPE1Q8N323 547 aa8.88□□□□□ -0.99
POLR1B-203ENST00000409894 ANKFN1Q8N957 763 aa8.88□□□□□ -0.99
POLR1B-203ENST00000409894 SPPL2BQ8TCT7 592 aa8.88□□□□□ -0.99
POLR1B-203ENST00000409894 NCSTNQ92542 709 aa8.88□□□□□ -0.99
POLR1B-203ENST00000409894 PEX13Q92968 403 aa8.88□□□□□ -0.99
POLR1B-203ENST00000409894 CORO1BQ9BR76 489 aa8.88□□□□□ -0.99
POLR1B-203ENST00000409894 OXCT2Q9BYC2 517 aaPredicted RBP8.88□□□□□ -0.99
POLR1B-203ENST00000409894 LRRN3Q9H3W5 708 aa8.88□□□□□ -0.99
POLR1B-203ENST00000409894 TMEM185BQ9H7F4 350 aa8.88□□□□□ -0.99
POLR1B-203ENST00000409894 CFAP97Q9P2B7 532 aa8.88□□□□□ -0.99
POLR1B-203ENST00000409894 PCDHGB7Q9Y5F8 929 aa8.88□□□□□ -0.99
POLR1B-203ENST00000409894 DNMT3AQ9Y6K1 912 aaPredicted RBP8.88□□□□□ -0.99
POLR1B-203ENST00000409894 TRAV19A0A0A6YYK7 116 aa8.87□□□□□ -0.99
POLR1B-203ENST00000409894 C1QTNF3-AMACRE9PGA6 284 aa8.87□□□□□ -0.99
POLR1B-203ENST00000409894 IFNA21P01568 189 aa8.87□□□□□ -0.99
POLR1B-203ENST00000409894 PRKCGP05129 697 aa8.87□□□□□ -0.99
POLR1B-203ENST00000409894 GSTM3P21266 225 aa8.87□□□□□ -0.99
POLR1B-203ENST00000409894 ACVR2AP27037 513 aa8.87□□□□□ -0.99
POLR1B-203ENST00000409894 HTR2AP28223 471 aa8.87□□□□□ -0.99
POLR1B-203ENST00000409894 SLC25A11Q02978 314 aaKnown RBP8.87□□□□□ -0.99
POLR1B-203ENST00000409894 IL10RBQ08334 325 aa8.87□□□□□ -0.99
POLR1B-203ENST00000409894 PUM1Q14671 1186 aaKnown RBP eCLIP8.87□□□□□ -0.99
POLR1B-203ENST00000409894 C6orf136Q5SQH8 315 aa8.87□□□□□ -0.99
POLR1B-203ENST00000409894 NOL9Q5SY16 702 aaKnown RBP8.87□□□□□ -0.99
POLR1B-203ENST00000409894 ELP2Q6IA86 826 aa8.87□□□□□ -0.99
POLR1B-203ENST00000409894 DESI1Q6ICB0 168 aa8.87□□□□□ -0.99
POLR1B-203ENST00000409894 ANKRD54Q6NXT1 300 aa8.87□□□□□ -0.99
POLR1B-203ENST00000409894 HSDL2Q6YN16 418 aa8.87□□□□□ -0.99
POLR1B-203ENST00000409894 FTMTQ8N4E7 242 aa8.87□□□□□ -0.99
POLR1B-203ENST00000409894 CLDN19Q8N6F1 224 aa8.87□□□□□ -0.99
POLR1B-203ENST00000409894 KCT2Q8NC54 265 aa8.87□□□□□ -0.99
POLR1B-203ENST00000409894 OR2T35Q8NGX2 323 aa8.87□□□□□ -0.99
POLR1B-203ENST00000409894 NFKBIDQ8NI38 313 aa8.87□□□□□ -0.99
POLR1B-203ENST00000409894 UTP4Q969X6 686 aaKnown RBP8.87□□□□□ -0.99
POLR1B-203ENST00000409894 CDCA5Q96FF9 252 aa8.87□□□□□ -0.99
POLR1B-203ENST00000409894 CLCC1Q96S66 551 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms